Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0004g01580.t01 | Wine grape | cytosol | 57.14 | 21.49 |
| KRG88464 | Soybean | cytosol | 58.73 | 16.23 |
| KRH47069 | Soybean | endoplasmic reticulum | 50.0 | 13.85 |
| Zm00001d033623_P003 | Maize | cytosol | 90.48 | 13.15 |
| Os03t0738600-01 | Rice | plasma membrane, plastid | 88.1 | 12.76 |
| EER93612 | Sorghum | cytosol | 86.51 | 12.59 |
| TraesCS4D01G035200.1 | Wheat | cytosol | 80.95 | 12.3 |
| KRH47064 | Soybean | endoplasmic reticulum | 55.56 | 12.28 |
| TraesCS4B01G037900.1 | Wheat | cytosol, golgi, nucleus, plastid, unclear | 82.54 | 12.08 |
| TraesCS4B01G037700.3 | Wheat | cytosol, golgi | 80.95 | 11.85 |
| Os03t0699700-01 | Rice | cytosol, plastid | 77.78 | 11.36 |
| PGSC0003DMT400063461 | Potato | cytosol | 61.9 | 11.24 |
| Os03t0700700-01 | Rice | cytosol, plasma membrane, plastid | 73.81 | 10.6 |
| GSMUA_Achr1P22970_001 | Banana | cytosol | 65.87 | 9.81 |
| Solyc08g014000.2.1 | Tomato | cytosol, nucleus, plastid | 65.08 | 9.53 |
| Os11t0575600-01 | Rice | mitochondrion | 65.08 | 9.45 |
| Solyc01g099180.2.1 | Tomato | cytosol | 63.49 | 9.37 |
| PGSC0003DMT400063477 | Potato | cytosol | 63.49 | 9.35 |
| PGSC0003DMT400054145 | Potato | cytosol | 63.49 | 9.32 |
| Solyc01g099160.2.1 | Tomato | cytosol, extracellular, nucleus | 63.49 | 9.28 |
| Solyc01g099210.2.1 | Tomato | cytosol | 63.49 | 9.27 |
| VIT_14s0128g00780.t01 | Wine grape | cytosol | 62.7 | 9.2 |
| Bra021322.1-P | Field mustard | cytosol | 61.9 | 9.1 |
| Solyc01g099190.2.1 | Tomato | cytosol, extracellular, nucleus, plastid | 61.9 | 9.09 |
| Solyc08g029000.2.1 | Tomato | cytosol, extracellular, nucleus | 61.9 | 9.06 |
| Solyc01g099200.2.1 | Tomato | cytosol, plastid | 60.32 | 9.04 |
| KRH33939 | Soybean | cytosol, endoplasmic reticulum | 61.9 | 9.02 |
| VIT_14s0128g00790.t01 | Wine grape | cytosol | 61.9 | 8.98 |
| PGSC0003DMT400028158 | Potato | cytosol | 61.11 | 8.93 |
| PGSC0003DMT400063469 | Potato | cytosol | 59.52 | 8.9 |
| PGSC0003DMT400063452 | Potato | cytosol | 56.35 | 8.89 |
| KRH23269 | Soybean | endoplasmic reticulum | 57.94 | 8.88 |
| AT1G55020.1 | Thale cress | cytosol | 60.32 | 8.85 |
| PGSC0003DMT400063446 | Potato | cytosol | 56.35 | 8.83 |
| KRH23265 | Soybean | endoplasmic reticulum, nucleus | 60.32 | 8.78 |
| KRH10050 | Soybean | endoplasmic reticulum | 59.52 | 8.75 |
| KRH68548 | Soybean | cytosol | 59.52 | 8.74 |
| CDY46325 | Canola | cytosol | 61.11 | 8.73 |
| Bra039948.1-P | Field mustard | cytosol | 61.11 | 8.68 |
| KRH23268 | Soybean | endoplasmic reticulum | 58.73 | 8.68 |
| KRH47522 | Soybean | endoplasmic reticulum, nucleus | 59.52 | 8.67 |
| AT3G22400.1 | Thale cress | cytosol | 60.32 | 8.58 |
| CDY38326 | Canola | cytosol | 60.32 | 8.57 |
| KRH10053 | Soybean | endoplasmic reticulum | 57.94 | 8.56 |
| KRH10051 | Soybean | endoplasmic reticulum, nucleus | 57.94 | 8.53 |
| KRH47525 | Soybean | endoplasmic reticulum | 58.73 | 8.53 |
| KRH44093 | Soybean | endoplasmic reticulum | 57.14 | 8.51 |
| KRH47067 | Soybean | endoplasmic reticulum | 57.94 | 8.45 |
| Solyc09g075860.2.1 | Tomato | cytosol, nucleus | 58.73 | 8.44 |
| PGSC0003DMT400081370 | Potato | cytosol | 58.73 | 8.44 |
| Bra023829.1-P | Field mustard | cytosol | 60.32 | 8.42 |
| KRH44097 | Soybean | cytosol, endoplasmic reticulum | 57.94 | 8.41 |
| CDY64191 | Canola | cytosol | 60.32 | 8.38 |
| KRH44090 | Soybean | endoplasmic reticulum | 57.14 | 8.37 |
| VIT_05s0020g03170.t01 | Wine grape | cytosol | 57.94 | 8.33 |
| KRH44094 | Soybean | endoplasmic reticulum | 56.35 | 8.19 |
| KRH47066 | Soybean | endoplasmic reticulum, nucleus | 55.56 | 8.15 |
| KRH23266 | Soybean | cytosol | 53.17 | 8.11 |
| KRG91271 | Soybean | cytosol | 54.76 | 8.04 |
| Os04t0447100-01 | Rice | cytosol | 50.79 | 8.04 |
| KRH44095 | Soybean | endoplasmic reticulum | 53.97 | 7.85 |
| Solyc09g075870.1.1 | Tomato | cytosol | 52.38 | 7.73 |
| Solyc01g099150.2.1 | Tomato | nucleus | 52.38 | 7.66 |
| KRH44092 | Soybean | nucleus | 48.41 | 7.12 |
| Os08t0509100-01 | Rice | nucleus | 51.59 | 6.91 |
| Os03t0179900-01 | Rice | plastid | 50.0 | 6.86 |
| Os05t0304600-01 | Rice | plastid | 46.03 | 6.85 |
| Os08t0508800-01 | Rice | nucleus, plasma membrane | 50.0 | 6.82 |
| Os12t0559200-01 | Rice | plastid | 47.62 | 6.51 |
| CDY43490 | Canola | cytosol, plasma membrane | 61.9 | 6.48 |
| Os02t0194700-01 | Rice | plasma membrane | 46.03 | 6.26 |
| KRH13357 | Soybean | endoplasmic reticulum | 3.97 | 2.07 |
| Solyc01g099170.2.1 | Tomato | cytosol, mitochondrion | 0.79 | 0.2 |
| KRH35534 | Soybean | cytosol | 0.0 | 0.0 |
| CDY70916 | Canola | cytosol | 0.0 | 0.0 |
| KRH62403 | Soybean | cytosol, endoplasmic reticulum | 0.0 | 0.0 |
| TraesCS4A01G275800.1 | Wheat | cytosol | 0.0 | 0.0 |
| KRH62399 | Soybean | cytosol, endoplasmic reticulum | 0.0 | 0.0 |
| KRH16725 | Soybean | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400063654 | Potato | cytosol | 0.0 | 0.0 |
| KRH57987 | Soybean | cytosol | 0.0 | 0.0 |
| Os12t0560200-00 | Rice | cytosol | 0.0 | 0.0 |
| Os12t0559934-00 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.60.60.20 | Gene3D:4.10.375.10 | MapMan:50.1.12 | ProteinID:BAS85915.1 | UniProt:C0L6K1 | EMBL:FJ660623 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0016702 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR013819 | InterPro:LipOase | InterPro:LipOase_C |
| InterPro:LipOase_C_sf | InterPro:LipOase_plant | EnsemblPlantsGene:Os03g0700400 | EnsemblPlants:Os03t0700400-00 | PFAM:PF00305 | PRINTS:PR00468 |
| PFscan:PS51393 | PANTHER:PTHR11771 | PANTHER:PTHR11771:SF49 | SUPFAM:SSF48484 | UniParc:UPI000195FAD1 | SEG:seg |
Description
LIPOXYGENASE 3Similar to LOX4 (Fragment). (Os03t0700400-00)
Coordinates
chr3:+:28090924..28092246
Molecular Weight (calculated)
14486.8 Da
IEP (calculated)
5.232
GRAVY (calculated)
-1.043
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: YDRVFFANDA YLPSQMPAAL KPYRDDELRN LRGDDQQGPY EEHDRVYRYD VYNDLGSPDS GNPRPILGGS PDTPYPRRGR TGRKPTTTDP DSESRLSLVE
101: QIYVPRDERF GHLKMADFLG YSIKAI
101: QIYVPRDERF GHLKMADFLG YSIKAI
001: MIHTDIAEIL CVKPKTTKKT KTMEEDVKKT TTMKIEGEVV VMKKNLLDFK DVMASLLDRV NELLGRRVSL HLISSHQPDP ANEKRGRLGK AAHLEKWVTK
101: IKTSVTAEET AFGVTFDWDE SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS NKAYLPSETP ELIKELREEE
201: LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK
301: SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV
401: ISRLQEFPPK SCLDSAKYGN QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL QADGTLKPLA IELSLPHAQG
501: ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV
601: FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH
701: GDKRHESWWP SMQTRDDLIE TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT ITPQLQTLLG ISIIEILSMH
801: STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI
101: IKTSVTAEET AFGVTFDWDE SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS NKAYLPSETP ELIKELREEE
201: LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK
301: SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV
401: ISRLQEFPPK SCLDSAKYGN QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL QADGTLKPLA IELSLPHAQG
501: ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV
601: FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH
701: GDKRHESWWP SMQTRDDLIE TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT ITPQLQTLLG ISIIEILSMH
801: STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI
Arabidopsis Description
LOX5Linoleate 9S-lipoxygenase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.