Factsheet for Solyc01g099180.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063461	Potato	cytosol	74.47	91.64
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	82.44	81.67
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	80.21	79.84
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	77.05	76.42
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	73.89	73.37
VIT_14s0128g00780.t01	Wine grape	cytosol	71.55	71.13
VIT_14s0128g00790.t01	Wine grape	cytosol	71.19	69.97
VIT_06s0004g01580.t01	Wine grape	cytosol	27.17	69.25
CDY70916	Canola	cytosol	40.05	67.86
KRH68548	Soybean	cytosol	67.21	66.9
KRH33939	Soybean	cytosol, endoplasmic reticulum	67.56	66.71
Solyc01g099200.2.1	Tomato	cytosol, plastid	65.11	66.11
Bra021322.1-P	Field mustard	cytosol	65.34	65.11
AT1G55020.1	Thale cress	cytosol	64.52	64.14
Solyc09g075860.2.1	Tomato	cytosol, nucleus	65.57	63.85
Solyc01g099210.2.1	Tomato	cytosol	64.29	63.62
GSMUA_Achr1P22970_001	Banana	cytosol	63.0	63.59
Os03t0700400-00	Rice	cytosol, plasma membrane	9.37	63.49
GSMUA_AchrUn_...	Banana	cytosol	62.3	62.22
GSMUA_AchrUn_...	Banana	cytosol	55.85	60.84
GSMUA_Achr1P24370_001	Banana	cytosol	60.3	60.8
TraesCS4A01G275800.1	Wheat	cytosol	16.63	59.41
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	35.48	59.3
Solyc09g075870.1.1	Tomato	cytosol	58.78	58.78
TraesCS4A01G359800.1	Wheat	cytosol	36.3	58.38
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	59.25	57.7
GSMUA_Achr6P25090_001	Banana	cytosol	56.56	57.64
GSMUA_Achr6P25110_001	Banana	cytosol	53.28	57.3
EER93612	Sorghum	cytosol	57.96	57.16
GSMUA_Achr9P19250_001	Banana	plasma membrane	63.58	57.1
TraesCS5A01G378800.2	Wheat	cytosol	51.87	56.94
Zm00001d033623_P003	Maize	cytosol	57.73	56.86
TraesCS6D01G122000.1	Wheat	cytosol	20.49	56.45
EER93611	Sorghum	cytosol	58.55	56.31
TraesCS4A01G275900.1	Wheat	cytosol, unclear	57.61	56.04
TraesCS4D01G035100.1	Wheat	cytosol	57.49	55.92
TraesCS5B01G382600.1	Wheat	cytosol	56.32	55.87
TraesCS5B01G382400.1	Wheat	cytosol, golgi	55.97	55.84
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	57.96	55.81
TraesCS5B01G382300.1	Wheat	cytosol, unclear	56.44	55.79
Os03t0699700-01	Rice	cytosol, plastid	56.32	55.74
TraesCS4B01G037800.1	Wheat	cytosol	57.26	55.69
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	56.32	55.67
TraesCS5A01G378900.1	Wheat	cytosol	56.32	55.67
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	57.14	55.58
HORVU5Hr1G093770.1	Barley	cytosol	56.09	55.5
Zm00001d033624_P001	Maize	cytosol	57.61	55.47
TraesCS5A01G378700.1	Wheat	cytosol	56.09	55.44
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	55.85	55.21
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	55.5	55.05
Solyc01g099150.2.1	Tomato	nucleus	55.39	54.87
EES04025	Sorghum	cytosol	55.74	54.84
Os03t0738600-01	Rice	plasma membrane, plastid	55.62	54.6
TraesCS3B01G602500.1	Wheat	cytosol	56.32	54.6
TraesCS4D01G035200.1	Wheat	cytosol	52.93	54.52
TraesCS4B01G037700.3	Wheat	cytosol, golgi	54.92	54.47
Zm00001d042541_P002	Maize	cytosol	56.09	54.19
TraesCS6B01G160400.1	Wheat	mitochondrion	55.39	54.18
TraesCS6A01G132500.1	Wheat	mitochondrion	55.39	54.18
TraesCS6A01G132200.1	Wheat	mitochondrion	55.39	54.18
TraesCS3B01G605700.1	Wheat	cytosol	55.97	54.01
EES04028	Sorghum	cytosol	55.04	53.84
KXG37783	Sorghum	cytosol	56.09	53.64
TraesCS5A01G379000.1	Wheat	nucleus, unclear	48.36	53.64
TraesCS5D01G388800.1	Wheat	cytosol	56.21	53.51
GSMUA_Achr6P25080_001	Banana	cytosol	47.54	52.39
Zm00001d042540_P008	Maize	cytosol	54.33	52.02
TraesCS5D01G513100.1	Wheat	cytosol	52.81	51.96
Os11t0575600-01	Rice	mitochondrion	52.22	51.38
HORVU5Hr1G117110.1	Barley	cytosol	52.58	50.62
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	28.81	50.41
TraesCS6D01G121900.1	Wheat	mitochondrion	25.53	48.77
TraesCS6B01G395700.1	Wheat	cytosol	46.25	48.65
Solyc09g055900.2.1	Tomato	cytosol	25.76	47.62
Solyc01g009680.2.1	Tomato	plastid	24.24	46.73
CDY43490	Canola	cytosol, plasma membrane	65.22	46.3
Solyc03g122340.2.1	Tomato	cytosol	43.91	41.3
Solyc05g014790.2.1	Tomato	plastid	42.15	39.52
Solyc01g006560.2.1	Tomato	plastid	40.98	38.8
Solyc01g006540.2.1	Tomato	plastid	40.52	38.62
Solyc12g011040.1.1	Tomato	nucleus, plastid	40.05	38.34
Solyc09g055890.2.1	Tomato	cytosol	15.34	35.31
GSMUA_Achr6P25100_001	Banana	cytosol	46.25	3.29

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702
GO:GO:0031408	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	InterPro:IPR001024	InterPro:IPR013819
InterPro:IPR027433	UniProt:K4B0V5	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf
InterPro:LipOase_Fe_BS	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom
InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095
PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF53	SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723
EnsemblPlantsGene:Solyc01g099180.2	EnsemblPlants:Solyc01g099180.2.1	UniParc:UPI0002768B74	SEG:seg	:	:

Description

Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:K4B0V5]

Coordinates

chr1:+:89486983..89490521

Molecular Weight (calculated)

97018.6 Da

IEP (calculated)

5.336

GRAVY (calculated)

-0.373

Length

854 amino acids

Sequence
(BLAST)

001: MHAITGKDDG KRVKGKVVLM KKNVLDFTGI MAAVVDDVAE LLGEKVSFQL ISSSVFDDRE GKLSNPAYLE NWITNITPII AGESTFSVTF DWDRNEFGVP
101: GAFIIKNFHL NEFFLKSLTL EDVPNHGKIH FVCNSWVYPA FRYKSDRIFF ANQAYLPSET PQPLRKYREN ELETLRGDGT GKLEEWDRVY DYAYYNDLGD
201: PDKGEEYARP VLGGSSEYPY PRRGRTGREP TKTDPNCESR IPLFMGSDIY VPRDERFGHL KMSDFLTVYL KSIAQSFLPA FKALFDNTPN EFDSFEDVLK
301: LYEGGVKLPE GPLLKAITDT IPLEILKDVF HSDGEGLFKF PTPQVIQEDK TAWRMDEEFG REILAGINPV LITRLQEFPP KSNLDPNIYG NQNSTITREQ
401: IEDKLDGLTV DEAIKANMLF ILNLHDIIMP YLRKINTTTN TETYASRTLL LLQDNGTLKP IAIELSLPHP DGDQFGTVSK VYTPSDQGVE GSIWQLAKAY
501: AVVNDSGIHE LISHWLNTHA VIEPFVIATN RQLSVLHPIH KLLHPHFRDT MNINALGRHM LINSAGTIEL TFFTGKYSME MSAIVYKDWI FPEQGLPADL
601: IKRGVAVEDS SSPHGIRLLI QDYPYAVDGL KIWSAIKSWV TEYCNFYYKS DDTVKKDSEL QAWWKELREE GHGDKKDEPW WPKMQTRQEL IESCTITIWI
701: ASALHAAVNF GQYPYAGYLV NRPSLSRMLM PEPGSPEYEE LKTNPDKVFL KTTVPPLQTL LEISVLKILS RHGSDTLYLG QRDSPEWTKD QEPLLAFERF
801: GKKLSDIGNQ ILQMNGDHEK WKNRLGPVKV PYISLFPTSG EGLTGKGIPN SVSI

Best Arabidopsis Sequence Match ( AT1G55020.1 )
(BLAST)

001: MFGELRDLLT GGGNETTTKK VKGTVVLMKK NVLDFNDFNA SFLDRLHEFL GNKITLRLVS SDVTDSENGS KGKLGKAAHL EDWITTITSL TAGESAFKVT
101: FDYETDFGYP GAFLIRNSHF SEFLLKSLTL EDVPGHGRVH YICNSWIYPA KHYTTDRVFF SNKTYLPHET PATLLKYREE ELVSLRGTGE GELKEWDRVY
201: DYAYYNDLGV PPKNPRPVLG GTQEYPYPRR GRTGRKPTKE DPQTESRLPI TSSLDIYVPR DERFGHLKMS DFLAYALKAI AQFIQPALEA VFDDTPKEFD
301: SFEDVLKIYE EGIDLPNQAL IDSIVKNIPL EMLKEIFRTD GQKFLKFPVP QVIKEDKTAW RTDEEFAREM LAGLNPVVIQ LLKEFPPKSK LDSESYGNQN
401: STITKSHIEH NLDGLTVEEA LEKERLFILD HHDTLMPYLG RVNTTTTKTY ASRTLLFLKD DGTLKPLVIE LSLPHPNGDK FGAVSEVYTP GEGVYDSLWQ
501: LAKAFVGVND SGNHQLISHW MQTHASIEPF VIATNRQLSV LHPVFKLLEP HFRDTMNINA LARQILINGG GIFEITVFPS KYAMEMSSFI YKNHWTFPDQ
601: ALPAELKKRG MAVEDPEAPH GLRLRIKDYP YAVDGLEVWY AIESWVRDYI FLFYKIEEDI QTDTELQAWW KEVREEGHGD KKSEPWWPKM QTREELVESC
701: TIIIWVASAL HAAVNFGQYP VAGYLPNRPT ISRQYMPKEN TPEFEELEKN PDKVFLKTIT AQLQTLLGIS LIEILSTHSS DEVYLGQRDS KEWAAEKEAL
801: EAFEKFGEKV KEIEKNIDER NDDETLKNRT GLVKMPYTLL FPSSEGGVTG RGIPNSVSI

Arabidopsis Description

LOX1Linoleate 9S-lipoxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06327]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.