Factsheet for VIT_14s0128g00780.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0128g00790.t01	Wine grape	cytosol	96.86	95.74
VIT_06s0004g01580.t01	Wine grape	cytosol	36.09	92.54
CDY70916	Canola	cytosol	45.4	77.38
PGSC0003DMT400028158	Potato	cytosol	76.95	76.68
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	76.6	76.42
KRH68548	Soybean	cytosol	74.62	74.71
Bra021322.1-P	Field mustard	cytosol	74.04	74.21
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	74.39	74.13
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	74.04	73.95
AT1G55020.1	Thale cress	cytosol	73.81	73.81
PGSC0003DMT400063654	Potato	cytosol	41.91	73.32
PGSC0003DMT400054145	Potato	cytosol	72.99	73.08
KRH33939	Soybean	cytosol, endoplasmic reticulum	73.46	72.95
PGSC0003DMT400063446	Potato	cytosol	67.75	72.39
PGSC0003DMT400063461	Potato	cytosol	58.09	71.9
Solyc01g099180.2.1	Tomato	cytosol	71.13	71.55
GSMUA_Achr1P22970_001	Banana	cytosol	69.62	70.69
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	70.2	70.28
PGSC0003DMT400063452	Potato	cytosol	64.84	69.71
Solyc01g099200.2.1	Tomato	cytosol, plastid	66.36	67.78
PGSC0003DMT400063477	Potato	cytosol	67.52	67.76
PGSC0003DMT400063469	Potato	cytosol	66.36	67.62
GSMUA_AchrUn_...	Banana	cytosol	67.29	67.6
Solyc01g099210.2.1	Tomato	cytosol	67.64	67.32
GSMUA_AchrUn_...	Banana	cytosol	60.77	66.58
VIT_05s0020g03170.t01	Wine grape	cytosol	67.87	66.55
GSMUA_Achr1P24370_001	Banana	cytosol	65.08	66.0
TraesCS6D01G122000.1	Wheat	cytosol	23.05	63.87
TraesCS4A01G275800.1	Wheat	cytosol	17.7	63.6
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	64.26	62.94
Os03t0700400-00	Rice	cytosol, plasma membrane	9.2	62.7
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	63.91	62.53
GSMUA_Achr9P19250_001	Banana	plasma membrane	68.92	62.25
TraesCS4B01G037800.1	Wheat	cytosol	63.56	62.19
GSMUA_Achr6P25090_001	Banana	cytosol	60.65	62.17
GSMUA_Achr6P25110_001	Banana	cytosol	57.39	62.09
TraesCS4A01G275900.1	Wheat	cytosol, unclear	63.45	62.07
TraesCS4D01G035100.1	Wheat	cytosol	63.33	61.96
EER93611	Sorghum	cytosol	62.98	60.92
TraesCS4A01G359800.1	Wheat	cytosol	37.49	60.64
Zm00001d033623_P003	Maize	cytosol	61.12	60.55
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	62.4	60.43
TraesCS5A01G378800.2	Wheat	cytosol	54.6	60.28
EER93612	Sorghum	cytosol	60.77	60.28
Zm00001d033624_P001	Maize	cytosol	61.7	59.75
TraesCS3B01G602500.1	Wheat	cytosol	60.88	59.36
TraesCS5B01G382400.1	Wheat	cytosol, golgi	59.14	59.35
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	59.37	59.23
TraesCS4B01G037700.3	Wheat	cytosol, golgi	59.25	59.12
TraesCS5A01G378700.1	Wheat	cytosol	59.37	59.03
HORVU5Hr1G093770.1	Barley	cytosol	59.25	58.98
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	59.25	58.91
TraesCS5B01G382300.1	Wheat	cytosol, unclear	59.25	58.91
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	59.14	58.8
Os03t0699700-01	Rice	cytosol, plastid	59.02	58.75
TraesCS4D01G035200.1	Wheat	cytosol	56.69	58.75
KXG37783	Sorghum	cytosol	60.88	58.57
TraesCS5B01G382600.1	Wheat	cytosol	58.67	58.54
TraesCS3B01G605700.1	Wheat	cytosol	60.3	58.53
Os03t0738600-01	Rice	plasma membrane, plastid	59.02	58.28
TraesCS5A01G378900.1	Wheat	cytosol	58.21	57.87
EES04025	Sorghum	cytosol	58.21	57.6
TraesCS6B01G160400.1	Wheat	mitochondrion	58.09	57.16
TraesCS6A01G132500.1	Wheat	mitochondrion	57.86	56.93
TraesCS6A01G132200.1	Wheat	mitochondrion	57.86	56.93
GSMUA_Achr6P25080_001	Banana	cytosol	51.11	56.65
EES04028	Sorghum	cytosol	57.51	56.59
TraesCS5D01G388800.1	Wheat	cytosol	58.67	56.19
Zm00001d042541_P002	Maize	cytosol	57.74	56.11
TraesCS5A01G379000.1	Wheat	nucleus, unclear	50.17	55.97
Zm00001d042540_P008	Maize	cytosol	57.86	55.72
Os11t0575600-01	Rice	mitochondrion	55.3	54.72
TraesCS5D01G513100.1	Wheat	cytosol	55.06	54.49
HORVU5Hr1G117110.1	Barley	cytosol	54.95	53.21
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	31.55	53.03
CDY43490	Canola	cytosol, plasma membrane	73.92	52.78
Solyc01g099150.2.1	Tomato	nucleus	52.5	52.32
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	29.69	52.25
TraesCS6B01G395700.1	Wheat	cytosol	49.36	52.22
VIT_13s0064g01500.t01	Wine grape	cytosol	14.55	50.0
TraesCS6D01G121900.1	Wheat	mitochondrion	25.49	48.99
VIT_07s0141g00340.t01	Wine grape	cytosol, plastid	36.2	48.75
VIT_00s0265g00170.t01	Wine grape	cytosol	28.52	48.51
VIT_13s0064g01490.t01	Wine grape	cytosol	22.24	47.87
VIT_06s0004g01500.t01	Wine grape	cytosol	42.61	46.27
VIT_06s0004g01480.t01	Wine grape	cytosol	42.26	45.78
VIT_07s0289g00010.t01	Wine grape	cytosol	25.38	45.7
VIT_06s0004g01460.t01	Wine grape	plastid	31.08	44.65
VIT_06s0004g01510.t01	Wine grape	plastid	45.29	43.17
VIT_13s0064g01480.t01	Wine grape	plastid	45.17	42.97
VIT_06s0004g01470.t01	Wine grape	cytosol	44.94	42.75
VIT_01s0010g02750.t01	Wine grape	plastid	44.7	41.74
VIT_06s0004g01450.t01	Wine grape	cytosol, extracellular	41.09	41.09
VIT_09s0002g01080.t01	Wine grape	cytosol	42.72	39.59
GSMUA_Achr6P25100_001	Banana	cytosol	49.94	3.57

Protein Annotations

Gene3D:1.20.245.10	EntrezGene:100232917	wikigene:100232917	MapMan:11.7.1.2	Gene3D:2.60.60.20	Gene3D:3.10.450.60
Gene3D:4.10.372.10	Gene3D:4.10.375.10	ProteinID:AAO12866	ProteinID:AAO12866.1	ProteinID:ACZ17392	ProteinID:ACZ17392.1
EMBL:AY159556	ProteinID:CCB59924	ProteinID:CCB59924.1	UniProt:F6HZ10	EMBL:FJ858256	EMBL:FN596501
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702
GO:GO:0031408	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	InterPro:IPR001024	InterPro:IPR013819
InterPro:IPR027433	EntrezGene:LOX	wikigene:LOX	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS
InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477
InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711
PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF53	SMART:SM00308	SUPFAM:SSF48484
SUPFAM:SSF49723	UniParc:UPI0002109FEB	ArrayExpress:VIT_14s0128g00780	EnsemblPlantsGene:VIT_14s0128g00780	EnsemblPlants:VIT_14s0128g00780.t01	unigene:Vvi.17310
SEG:seg	:	:	:	:	:

Description

Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:F6HZ10]

Coordinates

chr14:+:3311605..3315678

Molecular Weight (calculated)

97810.8 Da

IEP (calculated)

5.944

GRAVY (calculated)

-0.412

Length

859 amino acids

Sequence
(BLAST)

001: MIHSIVGAIT GENDKKKIKG TVVLMKKNVL DFNDFNASVL DRVHELLGQG VSLQLVSAVH GDPANGLQGK LGKPAYLEDW ITTITSLTAG ESAFKVTFDW
101: DEEIGEPGAF IIRNNHHSEF YLRTLTLEDV PGRGRIHFVC NSWVYPAKHY KTDRVFFTNQ TYLPSETPGP LRKYRKGELV NLRGDGTGEL KEWDRVYDYA
201: YYNDLGKPDR DLKYARPVLG GSAEYPYPRR GRTGRPPSEK DPKTESRLPL VMSLNIYVPR DERFGHLKMS DFLAYALKSI VQFLLPEFEA LCDITPNEFD
301: SFQDVLDLYE GGIKVPEGPL LDKIKDNIPL EMLKELVRTD GEHLFKFPMP QVIKEDKSAW RTDEEFAREM LAGLNPVVIR LLQEFPPKSK LDPEVYGNQN
401: SSITKEHIEN HLDDLTINEA MEKKRLFILD HHDVFMPYLR RINTTSTKTY ASRTLLFLKD DGTLKPLAIE LSLPHPNGDK FGAVNKVYTP AEDGVEGSIW
501: QLAKAYAAVN DSGYHQLLSH WLNTHAAIEP FVIATNRQLS VLHPIHKLLH PHFRDTMNIN ALARQILINA GGVVESTVFP SKYAMEMSSV VYKDWVLTEQ
601: ALPADLIKRG MAVEDSEAPH GLRLLIDDYP YAVDGLEIWS AIETWVKEYC SFYYKTDEMV QKDSELQSWW KEVREEGHGD KKDEPWWPKM RTVKELIETC
701: TIIIWVASAL HAAVNFGQYP YAGYLPNRPT ISRRFIPEEG TPEYEELKSN PDKAFLKTIT AQLQTLLGIS LIEVLSRHSS DEVYLGQRDT PEWTLDTTPL
801: KAFEKFGRKL ADIEEMIIDR NGNERFKNRV GPVKIPYTLL YPTSEGGLTG KGIPNSVSI

Best Arabidopsis Sequence Match ( AT1G55020.1 )
(BLAST)

001: MFGELRDLLT GGGNETTTKK VKGTVVLMKK NVLDFNDFNA SFLDRLHEFL GNKITLRLVS SDVTDSENGS KGKLGKAAHL EDWITTITSL TAGESAFKVT
101: FDYETDFGYP GAFLIRNSHF SEFLLKSLTL EDVPGHGRVH YICNSWIYPA KHYTTDRVFF SNKTYLPHET PATLLKYREE ELVSLRGTGE GELKEWDRVY
201: DYAYYNDLGV PPKNPRPVLG GTQEYPYPRR GRTGRKPTKE DPQTESRLPI TSSLDIYVPR DERFGHLKMS DFLAYALKAI AQFIQPALEA VFDDTPKEFD
301: SFEDVLKIYE EGIDLPNQAL IDSIVKNIPL EMLKEIFRTD GQKFLKFPVP QVIKEDKTAW RTDEEFAREM LAGLNPVVIQ LLKEFPPKSK LDSESYGNQN
401: STITKSHIEH NLDGLTVEEA LEKERLFILD HHDTLMPYLG RVNTTTTKTY ASRTLLFLKD DGTLKPLVIE LSLPHPNGDK FGAVSEVYTP GEGVYDSLWQ
501: LAKAFVGVND SGNHQLISHW MQTHASIEPF VIATNRQLSV LHPVFKLLEP HFRDTMNINA LARQILINGG GIFEITVFPS KYAMEMSSFI YKNHWTFPDQ
601: ALPAELKKRG MAVEDPEAPH GLRLRIKDYP YAVDGLEVWY AIESWVRDYI FLFYKIEEDI QTDTELQAWW KEVREEGHGD KKSEPWWPKM QTREELVESC
701: TIIIWVASAL HAAVNFGQYP VAGYLPNRPT ISRQYMPKEN TPEFEELEKN PDKVFLKTIT AQLQTLLGIS LIEILSTHSS DEVYLGQRDS KEWAAEKEAL
801: EAFEKFGEKV KEIEKNIDER NDDETLKNRT GLVKMPYTLL FPSSEGGVTG RGIPNSVSI

Arabidopsis Description

LOX1Linoleate 9S-lipoxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06327]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.