CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042540_P008	Maize	cytosol	92.78	90.81
EES04025	Sorghum	cytosol	81.67	82.14
Os03t0738600-01	Rice	plasma membrane, plastid	76.75	77.01
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	74.69	75.46
TraesCS5B01G382300.1	Wheat	cytosol, unclear	74.46	75.23
TraesCS5A01G378700.1	Wheat	cytosol	74.23	75.0
TraesCS4A01G359800.1	Wheat	cytosol	45.48	74.76
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	73.08	73.84
TraesCS5A01G378800.2	Wheat	cytosol	65.75	73.78
EER93612	Sorghum	cytosol	72.97	73.56
TraesCS5B01G382600.1	Wheat	cytosol	72.05	73.05
TraesCS5B01G382400.1	Wheat	cytosol, golgi	71.59	73.01
TraesCS5A01G378900.1	Wheat	cytosol	71.71	72.45
HORVU5Hr1G093770.1	Barley	cytosol	71.59	72.42
TraesCS5D01G388800.1	Wheat	cytosol	72.16	70.23
TraesCS5A01G379000.1	Wheat	nucleus, unclear	60.71	68.83
TraesCS5D01G513100.1	Wheat	cytosol	68.16	68.55
HORVU5Hr1G117110.1	Barley	cytosol	66.9	65.84
CDY70916	Canola	cytosol	36.2	62.7
EER93611	Sorghum	cytosol	62.77	61.71
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	34.36	61.48
GSMUA_Achr1P22970_001	Banana	cytosol	57.62	59.46
KXG37783	Sorghum	cytosol	60.71	59.35
PGSC0003DMT400063654	Potato	cytosol	33.22	59.06
KRH35534	Soybean	cytosol	30.24	58.93
KRH16725	Soybean	cytosol	15.58	58.87
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	56.93	57.66
KRH62399	Soybean	cytosol, endoplasmic reticulum	15.58	57.63
PGSC0003DMT400028158	Potato	cytosol	56.82	57.54
VIT_14s0128g00780.t01	Wine grape	cytosol	56.59	57.51
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	56.59	57.44
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	56.59	57.38
Bra021322.1-P	Field mustard	cytosol	56.24	57.29
KRH62403	Soybean	cytosol, endoplasmic reticulum	14.89	57.27
PGSC0003DMT400054145	Potato	cytosol	56.24	57.23
PGSC0003DMT400063446	Potato	cytosol	52.58	57.09
VIT_14s0128g00790.t01	Wine grape	cytosol	56.59	56.85
KRH57987	Soybean	cytosol	16.72	56.59
AT1G55020.1	Thale cress	cytosol	55.56	56.46
Solyc09g075860.2.1	Tomato	cytosol, nucleus	56.36	56.1
KRH68548	Soybean	cytosol	54.98	55.94
PGSC0003DMT400081370	Potato	cytosol	56.13	55.87
PGSC0003DMT400063477	Potato	cytosol	54.52	55.61
KRH33939	Soybean	cytosol, endoplasmic reticulum	54.98	55.49
Solyc01g099200.2.1	Tomato	cytosol, plastid	53.15	55.17
Solyc01g099210.2.1	Tomato	cytosol	54.52	55.16
Solyc01g099180.2.1	Tomato	cytosol	53.84	55.04
PGSC0003DMT400063469	Potato	cytosol	53.04	54.92
KRG91271	Soybean	cytosol	53.95	54.9
VIT_05s0020g03170.t01	Wine grape	cytosol	54.87	54.68
KRH23265	Soybean	endoplasmic reticulum, nucleus	54.18	54.62
PGSC0003DMT400063452	Potato	cytosol	49.94	54.57
PGSC0003DMT400063461	Potato	cytosol	43.3	54.47
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	53.04	53.96
KRH23266	Soybean	cytosol	50.97	53.87
KRH44090	Soybean	endoplasmic reticulum	53.04	53.84
KRH10050	Soybean	endoplasmic reticulum	52.81	53.79
KRH44093	Soybean	endoplasmic reticulum	52.12	53.78
KRH47522	Soybean	endoplasmic reticulum, nucleus	52.92	53.41
KRH13357	Soybean	endoplasmic reticulum	14.78	53.31
KRH10051	Soybean	endoplasmic reticulum, nucleus	51.89	52.92
KRH47067	Soybean	endoplasmic reticulum	52.35	52.89
Solyc09g075870.1.1	Tomato	cytosol	51.55	52.69
KRH44095	Soybean	endoplasmic reticulum	52.23	52.66
Bra039948.1-P	Field mustard	cytosol	53.49	52.65
AT3G22400.1	Thale cress	cytosol	53.26	52.48
KRH47066	Soybean	endoplasmic reticulum, nucleus	51.55	52.39
CDY38326	Canola	cytosol	53.04	52.2
KRH10053	Soybean	endoplasmic reticulum	50.97	52.17
KRH44097	Soybean	cytosol, endoplasmic reticulum	51.78	52.07
KRH23268	Soybean	endoplasmic reticulum	50.63	51.82
CDY46325	Canola	cytosol	52.35	51.81
KRH44094	Soybean	endoplasmic reticulum	51.43	51.79
KRH47525	Soybean	endoplasmic reticulum	51.32	51.61
KRH23269	Soybean	endoplasmic reticulum	48.57	51.58
VIT_06s0004g01580.t01	Wine grape	cytosol	19.7	51.34
Bra023829.1-P	Field mustard	cytosol	52.58	50.83
KRH47069	Soybean	endoplasmic reticulum	26.35	50.55
CDY64191	Canola	cytosol	52.35	50.39
KRG88464	Soybean	cytosol	26.12	50.0
KRH44092	Soybean	nucleus	46.85	47.72
KRH47064	Soybean	endoplasmic reticulum	30.7	47.02
KXG24148	Sorghum	cytosol	42.84	43.64
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	24.74	42.27
OQU80925	Sorghum	cytosol	40.78	41.16
CDY43490	Canola	cytosol, plasma membrane	56.13	40.73
EER95400	Sorghum	mitochondrion	42.38	40.04
Solyc01g099150.2.1	Tomato	nucleus	39.4	39.91
KXG23911	Sorghum	cytosol, plastid	24.86	39.82
KXG27309	Sorghum	mitochondrion, plastid	41.35	39.8
EES10882	Sorghum	plastid	40.78	38.53
KXG29701	Sorghum	plastid	40.21	38.28

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
EntrezGene:8056098	ProteinID:ACV84252.1	UniProt:C5XES7	ncoils:Coil	EnsemblPlants:EES04028	ProteinID:EES04028
ProteinID:EES04028.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491
GO:GO:0016702	GO:GO:0031408	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	InterPro:IPR001024
InterPro:IPR013819	InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf
InterPro:LipOase_Fe_BS	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom
InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095
PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF54	SMART:SM00308	EnsemblPlantsGene:SORBI_3003G385900	SUPFAM:SSF48484
SUPFAM:SSF49723	unigene:Sbi.1090	UniParc:UPI0001A85445	RefSeq:XP_002458908.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:69827192..69830766

Molecular Weight (calculated)

98259.8 Da

IEP (calculated)

6.066

GRAVY (calculated)

-0.344

Length

873 amino acids

Sequence
(BLAST)

001: MFGNIGKIPV ISDITGSNKN AHLKGNVVLM RKTVLGFDVT SMAGAVIDGV GEFLGRGVTC QLISSTVVDP YNGNRGKVGA EASLEQWLLQ PPPLLSGENK
101: FGVTFDWEVE KHGVPGAIIV KNNHASEFFL KTITLDDVPG HGTVVFVANS WIYPQSKYRY NRVFFSNDTY LPSQMPAALK PYRDDELRNL RGDDQQGPYQ
201: EHDRVYRYDV YNDLGNPDGG NPRPVLGGSK DHPYPRRGRT GRKPTLTDPS SESRLTLVDG DVYVPRDERF GHIKNSDFYG YTIKAFADGL VPILQGYFLG
301: LEFNSFKDIL QLYEGGIKLP DIPALEEFRK QFPLQMVKDL MPAGGDYVLK LPMPQIIKED KKAWMSDEEF ARETLAGVNP LIIRRLTEFP PKSTLDPSKY
401: GDQTSTITEA HIAGSLEGLT VQEALDSNRL YILDHHDHYM PFLIEVNSLD DNFIYATRTL LFLRGNGTLA PVAIEMSLPE LVRDVTAAKS TVYTPAPPTA
501: AGAEAWVWRL AKAYVNVNDY CWHQGVSHWL NTHAVMEPFV IATNRQLSVT HPVHRLLLPH YRDTMNINAL ARQKLINAGG IFEMTVFPRK YAIEITSKVY
601: ATWNFADQAL PDDLIKRGMA VPDPSSPYKV RLLIEDYPYA SDGLAVWHAI EQWVTEYLGI YYPNDGVLQA DVELQAWWKE AREVGHADLK DEPWWPKMET
701: VAELVKACTT IIWIASALHA AVNFGQYPYC GYHPNRPSVS RRPMPVPGTD EYAELEENPE KFFLRSITTQ FQAVVGISLL EILSSHSSDE VYLGQRDTKE
801: WTSDAKAQEA FRRFGARLVE IEKRVEAMNK DPRYKNRYSE AQFPYTLLFP NTSDKKGDNA GVTAKGIPNS ISI

Best Arabidopsis Sequence Match ( AT1G55020.1 )
(BLAST)

001: MFGELRDLLT GGGNETTTKK VKGTVVLMKK NVLDFNDFNA SFLDRLHEFL GNKITLRLVS SDVTDSENGS KGKLGKAAHL EDWITTITSL TAGESAFKVT
101: FDYETDFGYP GAFLIRNSHF SEFLLKSLTL EDVPGHGRVH YICNSWIYPA KHYTTDRVFF SNKTYLPHET PATLLKYREE ELVSLRGTGE GELKEWDRVY
201: DYAYYNDLGV PPKNPRPVLG GTQEYPYPRR GRTGRKPTKE DPQTESRLPI TSSLDIYVPR DERFGHLKMS DFLAYALKAI AQFIQPALEA VFDDTPKEFD
301: SFEDVLKIYE EGIDLPNQAL IDSIVKNIPL EMLKEIFRTD GQKFLKFPVP QVIKEDKTAW RTDEEFAREM LAGLNPVVIQ LLKEFPPKSK LDSESYGNQN
401: STITKSHIEH NLDGLTVEEA LEKERLFILD HHDTLMPYLG RVNTTTTKTY ASRTLLFLKD DGTLKPLVIE LSLPHPNGDK FGAVSEVYTP GEGVYDSLWQ
501: LAKAFVGVND SGNHQLISHW MQTHASIEPF VIATNRQLSV LHPVFKLLEP HFRDTMNINA LARQILINGG GIFEITVFPS KYAMEMSSFI YKNHWTFPDQ
601: ALPAELKKRG MAVEDPEAPH GLRLRIKDYP YAVDGLEVWY AIESWVRDYI FLFYKIEEDI QTDTELQAWW KEVREEGHGD KKSEPWWPKM QTREELVESC
701: TIIIWVASAL HAAVNFGQYP VAGYLPNRPT ISRQYMPKEN TPEFEELEKN PDKVFLKTIT AQLQTLLGIS LIEILSTHSS DEVYLGQRDS KEWAAEKEAL
801: EAFEKFGEKV KEIEKNIDER NDDETLKNRT GLVKMPYTLL FPSSEGGVTG RGIPNSVSI

Arabidopsis Description

LOX1Linoleate 9S-lipoxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06327]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.