CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64191	Canola	cytosol	97.39	94.71
CDY38326	Canola	cytosol	91.84	91.32
AT3G22400.1	Thale cress	cytosol	91.61	91.2
KRH35534	Soybean	cytosol	36.51	71.88
KRG91271	Soybean	cytosol	65.65	67.48
CDY70916	Canola	cytosol	38.21	66.87
VIT_05s0020g03170.t01	Wine grape	cytosol	65.31	65.75
Solyc09g075860.2.1	Tomato	cytosol, nucleus	65.31	65.68
PGSC0003DMT400081370	Potato	cytosol	65.19	65.56
GSMUA_Achr1P22970_001	Banana	cytosol	61.22	63.83
Solyc09g075870.1.1	Tomato	cytosol	61.22	63.23
TraesCS4A01G275800.1	Wheat	cytosol	16.89	62.34
KRG88464	Soybean	cytosol	32.09	62.06
Os03t0700400-00	Rice	cytosol, plasma membrane	8.73	61.11
GSMUA_AchrUn_...	Banana	cytosol	53.97	60.71
GSMUA_Achr1P24370_001	Banana	cytosol	57.48	59.86
TraesCS4A01G359800.1	Wheat	cytosol	35.83	59.51
TraesCS6D01G122000.1	Wheat	cytosol	20.86	59.35
GSMUA_AchrUn_...	Banana	cytosol	57.37	59.18
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	57.26	57.58
Os03t0699700-01	Rice	cytosol, plastid	55.56	56.78
EER93611	Sorghum	cytosol	56.69	56.31
TraesCS4B01G037800.1	Wheat	cytosol	56.01	56.26
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	56.58	56.26
Zm00001d033624_P001	Maize	cytosol	56.46	56.14
EER93612	Sorghum	cytosol	55.1	56.12
Zm00001d033623_P003	Maize	cytosol	55.1	56.06
TraesCS4A01G275900.1	Wheat	cytosol, unclear	55.67	55.92
Os03t0738600-01	Rice	plasma membrane, plastid	55.1	55.86
GSMUA_Achr6P25090_001	Banana	cytosol	53.06	55.85
TraesCS4D01G035100.1	Wheat	cytosol	55.44	55.69
GSMUA_Achr6P25110_001	Banana	cytosol	49.89	55.42
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	54.99	55.24
GSMUA_Achr9P19250_001	Banana	plasma membrane	59.18	54.89
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	53.4	54.7
TraesCS5A01G378800.2	Wheat	cytosol	48.07	54.5
TraesCS4B01G037700.3	Wheat	cytosol, golgi	53.17	54.47
KXG37783	Sorghum	cytosol	55.1	54.42
TraesCS4D01G035200.1	Wheat	cytosol	51.13	54.4
TraesCS3B01G602500.1	Wheat	cytosol	54.08	54.14
TraesCS5B01G382300.1	Wheat	cytosol, unclear	52.83	53.94
HORVU5Hr1G093770.1	Barley	cytosol	52.72	53.88
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	52.72	53.82
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	52.72	53.82
TraesCS5A01G378700.1	Wheat	cytosol	52.61	53.7
TraesCS5B01G382400.1	Wheat	cytosol, golgi	52.04	53.62
EES04025	Sorghum	cytosol	52.61	53.46
TraesCS3B01G605700.1	Wheat	cytosol	53.63	53.45
TraesCS5B01G382600.1	Wheat	cytosol	51.93	53.19
Zm00001d042541_P002	Maize	cytosol	53.29	53.17
TraesCS5A01G378900.1	Wheat	cytosol	51.93	53.01
EES04028	Sorghum	cytosol	51.81	52.35
TraesCS6A01G132200.1	Wheat	mitochondrion	51.59	52.12
TraesCS6A01G132500.1	Wheat	mitochondrion	51.59	52.12
TraesCS6B01G160400.1	Wheat	mitochondrion	51.59	52.12
TraesCS5A01G379000.1	Wheat	nucleus, unclear	44.9	51.43
Zm00001d042540_P008	Maize	cytosol	51.81	51.23
TraesCS5D01G388800.1	Wheat	cytosol	52.04	51.17
TraesCS5D01G513100.1	Wheat	cytosol	50.11	50.92
Os11t0575600-01	Rice	mitochondrion	49.32	50.12
GSMUA_Achr6P25080_001	Banana	cytosol	43.99	50.06
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	27.66	50.0
HORVU5Hr1G117110.1	Barley	cytosol	50.23	49.94
TraesCS6B01G395700.1	Wheat	cytosol	45.01	48.89
CDY72550	Canola	cytosol	17.57	48.29
CDY07409	Canola	cytosol	20.98	47.8
CDY61034	Canola	cytosol	24.04	47.43
CDY43490	Canola	cytosol, plasma membrane	61.34	44.97
CDY61881	Canola	cytosol	18.03	44.79
TraesCS6D01G121900.1	Wheat	mitochondrion	22.11	43.62
CDY64617	Canola	cytosol	42.63	40.91
CDX96769	Canola	cytosol	42.4	40.7
CDX81825	Canola	cytosol	42.06	40.37
CDY21750	Canola	cytosol, mitochondrion, plastid	41.84	40.15
CDY49853	Canola	plastid	41.27	39.61
CDX82146	Canola	plastid	37.64	39.06
CDY04196	Canola	plastid	39.23	38.92
CDY61036	Canola	plastid	39.0	38.7
CDX91565	Canola	plastid	39.34	38.56
CDY16339	Canola	plastid	33.11	38.37
CDX67920	Canola	plastid	39.12	38.16
CDY70843	Canola	cytosol	5.44	38.1
CDX79416	Canola	plastid	38.78	37.83
CDY07417	Canola	plastid	39.34	37.8
CDY12655	Canola	plastid	38.89	37.57
CDY51606	Canola	plastid	38.89	37.57
CDY61880	Canola	plastid	20.75	33.21
CDY07407	Canola	cytosol, plastid	39.0	31.36
CDY28879	Canola	cytosol, endoplasmic reticulum, plastid	39.12	30.8
CDY70245	Canola	plastid	15.87	30.57
CDY07408	Canola	plastid	15.65	30.13
CDY70606	Canola	plastid	13.27	29.62
CDY61882	Canola	plastid	12.7	28.94
GSMUA_Achr6P25100_001	Banana	cytosol	43.76	3.21

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
GO:A0A078I623	UniProt:A0A078I623	EnsemblPlants:CDY46325	ProteinID:CDY46325	ProteinID:CDY46325.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408
GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00083734001	InterPro:IPR001024	InterPro:IPR013819
InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS
InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf
PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095	PFscan:PS51393
PANTHER:PTHR11771	PANTHER:PTHR11771:SF53	SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723	UniPathway:UPA00382
UniParc:UPI0004EEC4D2	SEG:seg	:	:	:	:

Description

BnaC01g31590DLipoxygenase [Source:UniProtKB/TrEMBL;Acc:A0A078I623]

Coordinates

chrLK032661:-:85090..91797

Molecular Weight (calculated)

100769.0 Da

IEP (calculated)

6.972

GRAVY (calculated)

-0.481

Length

882 amino acids

Sequence
(BLAST)

001: MIHTHIAEIL CVKPKTKKTK TMEEDVKNKK TKKTMKIEGE VVVMKKNLLD FKDTMASLLD RIHELLGRRV SLHLISSLQP DPANEKRGRL GKAAHLEKWV
101: TKIKTSVTAE ETAFGVTFDW DESMGPPAAF VIKNQHRSQF YLKSLTLRNS QGGAIHFVCN SWIYPSHRYR SDRVFFSNQA YLPSETPELV KELREEELKN
201: LRGNEKGELK EWDRVYDYAY YNDLGAPDKG PDSARPVLGG SPEFPYPRRG KTGRKPTKSD PKSESRLALL NLNIYVPRDE RFSHVKFSDF LAYALKSVTQ
301: VIVPEIASLC DKTINEFDSF EDVFHLYDGS IRLANGHTIS KLRDIIPWEM FRELIRNDGE RFLKFPLPDV LKQSRSAWRT DEEFAREMLA GLNPVVISRL
401: KDFPPKSNLD SAKYGNQNSS IREGHIEPHM NGTSVQEALE QNKLFLLDHH DALMPYLTRI NSTNTKTYAT RTLLLLQEDG TLKPLAIELS LPHAQGESHG
501: SVSKIFTPSE KGVEGTVWQL AKAYAAVNDS GYHQLISHWL QTHAVIEPFI IASNRQLSVV HPIYKLLHPH FRDTMNINAL ARHVLINSDG VLERTVFPSR
601: YAMEMSSSIY KSWVFTDQAL PMDLLKRGVA VEDPSSDNGV KLLIEDYPFA VDGLEIWSAI KTWVTEYCSI YYKNDRTVQT DTEIQSWWTE LRTEGHGDIQ
701: HESWWPSMQT RDDLMETCTI IIWIASALHA AVNFGQYPYA GFLPNRPTVS RRFMPEPGTK EYTELEENEE VAFLKTITPQ LQTLLGISII EILSMHSTDE
801: IYLGQRDSPN WTADDEPLEA FKRFGKSLEV IENNIIRRNN DKKLKNRSGP VNIPYTLLYP NTTDYTREGG LTGKGIPNSV SI

Best Arabidopsis Sequence Match ( AT3G22400.1 )
(BLAST)

001: MIHTDIAEIL CVKPKTTKKT KTMEEDVKKT TTMKIEGEVV VMKKNLLDFK DVMASLLDRV NELLGRRVSL HLISSHQPDP ANEKRGRLGK AAHLEKWVTK
101: IKTSVTAEET AFGVTFDWDE SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS NKAYLPSETP ELIKELREEE
201: LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK
301: SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV
401: ISRLQEFPPK SCLDSAKYGN QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL QADGTLKPLA IELSLPHAQG
501: ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV
601: FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH
701: GDKRHESWWP SMQTRDDLIE TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT ITPQLQTLLG ISIIEILSMH
801: STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI

Arabidopsis Description

LOX5Linoleate 9S-lipoxygenase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.