Factsheet for Os03t0699700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0700400-00	Rice	cytosol, plasma membrane	11.36	77.78
Os03t0738600-01	Rice	plasma membrane, plastid	74.16	73.56
TraesCS6B01G395700.1	Wheat	cytosol	65.12	69.21
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	67.67	66.59
CDY70916	Canola	cytosol	37.43	64.09
KRH35534	Soybean	cytosol	33.26	64.06
GSMUA_Achr1P22970_001	Banana	cytosol	61.88	63.12
KRH16725	Soybean	cytosol	16.69	62.34
PGSC0003DMT400063654	Potato	cytosol	35.46	62.32
KRH62399	Soybean	cytosol, endoplasmic reticulum	16.57	60.59
KRH62403	Soybean	cytosol, endoplasmic reticulum	15.64	59.47
VIT_14s0128g00780.t01	Wine grape	cytosol	58.75	59.02
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	58.52	58.65
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	58.52	58.58
PGSC0003DMT400028158	Potato	cytosol	58.4	58.47
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	58.05	58.26
VIT_14s0128g00790.t01	Wine grape	cytosol	58.63	58.23
PGSC0003DMT400054145	Potato	cytosol	57.71	58.04
Solyc09g075860.2.1	Tomato	cytosol, nucleus	58.86	57.92
PGSC0003DMT400081370	Potato	cytosol	58.63	57.7
Bra021322.1-P	Field mustard	cytosol	57.24	57.64
VIT_05s0020g03170.t01	Wine grape	cytosol	58.4	57.53
AT1G55020.1	Thale cress	cytosol	57.13	57.39
KRH57987	Soybean	cytosol	17.15	57.36
PGSC0003DMT400063446	Potato	cytosol	53.07	56.97
KRH68548	Soybean	cytosol	56.55	56.88
Solyc01g099200.2.1	Tomato	cytosol, plastid	55.27	56.72
VIT_06s0004g01580.t01	Wine grape	cytosol	22.02	56.72
PGSC0003DMT400063469	Potato	cytosol	55.04	56.35
Solyc01g099180.2.1	Tomato	cytosol	55.74	56.32
KRG91271	Soybean	cytosol	55.97	56.29
KRH23266	Soybean	cytosol	53.53	55.93
KRH44093	Soybean	endoplasmic reticulum	54.81	55.91
Os11t0575600-01	Rice	mitochondrion	56.2	55.88
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	55.5	55.83
KRH44090	Soybean	endoplasmic reticulum	55.62	55.81
PGSC0003DMT400063477	Potato	cytosol	55.27	55.72
Solyc01g099210.2.1	Tomato	cytosol	55.62	55.62
Bra039948.1-P	Field mustard	cytosol	57.13	55.58
CDY46325	Canola	cytosol	56.78	55.56
CDY38326	Canola	cytosol	57.01	55.47
PGSC0003DMT400063452	Potato	cytosol	51.33	55.44
KRH23265	Soybean	endoplasmic reticulum, nucleus	55.62	55.43
AT3G22400.1	Thale cress	cytosol	56.89	55.42
KRH10050	Soybean	endoplasmic reticulum	54.92	55.31
KRH33939	Soybean	cytosol, endoplasmic reticulum	55.16	55.03
PGSC0003DMT400063461	Potato	cytosol	44.15	54.9
KRH44094	Soybean	endoplasmic reticulum	55.04	54.79
KRH10051	Soybean	endoplasmic reticulum, nucleus	54.23	54.67
KRH10053	Soybean	endoplasmic reticulum	54.0	54.63
Bra023829.1-P	Field mustard	cytosol	57.01	54.49
KRH47522	Soybean	endoplasmic reticulum, nucleus	54.46	54.34
KRH47066	Soybean	endoplasmic reticulum, nucleus	54.0	54.25
Solyc09g075870.1.1	Tomato	cytosol	53.65	54.22
KRH23268	Soybean	endoplasmic reticulum	53.53	54.16
CDY64191	Canola	cytosol	56.89	54.13
KRH47525	Soybean	endoplasmic reticulum	54.11	53.8
KRH47067	Soybean	endoplasmic reticulum	53.3	53.24
KRH23269	Soybean	endoplasmic reticulum	50.64	53.16
KRH44095	Soybean	endoplasmic reticulum	52.95	52.77
KRH13357	Soybean	endoplasmic reticulum	14.72	52.48
KRH44097	Soybean	cytosol, endoplasmic reticulum	52.61	52.3
KRH47069	Soybean	endoplasmic reticulum	26.88	50.99
KRH47064	Soybean	endoplasmic reticulum	32.79	49.65
KRH44092	Soybean	nucleus	49.25	49.59
Os12t0559934-00	Rice	cytosol	11.12	49.23
KRG88464	Soybean	cytosol	25.72	48.68
Os05t0304600-01	Rice	plastid	45.08	45.93
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	26.3	44.42
Os04t0447100-01	Rice	cytosol	39.98	43.34
Solyc01g099150.2.1	Tomato	nucleus	43.11	43.16
CDY43490	Canola	cytosol, plasma membrane	57.13	40.98
Os08t0508800-01	Rice	nucleus, plasma membrane	40.67	37.99
Os03t0179900-01	Rice	plastid	40.21	37.8
Os08t0509100-01	Rice	nucleus	40.67	37.3
Os12t0559200-01	Rice	plastid	39.51	36.98
Os02t0194700-01	Rice	plasma membrane	37.89	35.31
Os12t0560200-00	Rice	cytosol	3.82	33.33

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	EntrezGene:4333818
MapMan:50.1.12	ProteinID:AAO38440.1	ProteinID:AAX95631.1	EMBL:AB099850	ProteinID:ABF98382.1	EMBL:AK103565
ProteinID:BAF12904.1	ProteinID:BAS85907.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006631
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491
GO:GO:0016702	GO:GO:0031408	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	InterPro:IPR001024
InterPro:IPR013819	InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf
InterPro:LipOase_Fe_BS	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	EnsemblPlantsGene:Os03g0699700	EnsemblPlants:Os03t0699700-01	PFAM:PF00305
PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081
ScanProsite:PS00711	PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF49	UniProt:Q76I22
SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723	UniParc:UPI00000027D5	RefSeq:XP_015632769.1	SEG:seg

Description

R9-LIPOXYGENASE 19-lipoxigenase. (Os03t0699700-01)

Coordinates

chr3:+:28049600..28053580

Molecular Weight (calculated)

97504.4 Da

IEP (calculated)

6.805

GRAVY (calculated)

-0.379

Length

863 amino acids

Sequence
(BLAST)

001: MLGGLKDKLT GKNGNKIKGL AVLMSRKLLD PRDFTASLLD NVHEVFGNSI TCQLVSATVA DQNNEGRGIV GSEANLEQGL TDLPSVSQGE SKLTVRFNWE
101: MDKHGVPGAI IIKNHHSTKF FLKTITLHDV PGCDTIVFVA NSWIYPVGKY HYNRIFFANN SYLPSQMPEA LRPYREDELR YLRGEDRQGP YQEHDRIYRY
201: DVYNDLGEPD RDNPRPVLGG SQKHPYPRRG RTGRIPTKKD PNSESRLSLL EQIYVPSDER FAHLKMSDFA GYSIKAIVQG ILPAIRTYVD LTPGEFDSFE
301: DILKLYRGGL KLPSIPALEE LRKSFPVQLI KDLLPVGGSY LLKFPKPDII KENEVAWRTD EEFAREILAG LNPMVIRRLT EFPPKSTLDP SKYGDQTSTI
401: TPAHIEKNLE GLSVQQALDS NRLYILDHHD HFMPFLIDIN SLDGIFTYAT RTLLFLRDDD TLKPLAIELS LPHIEGNLTS AKSKVHTPAS SGIESWVWQL
501: AKAYVAVNDS GWHQLISHWL NTHAVMEPFV IATNRQLSVT HPVYKLLQPH YRDTMTINAL ARQTLINGGG IFEQTVFPGK HALAMSSAVY KNWNFTEQGL
601: PDDLIKRGIA IKDPSSPSKV KLLIKDYPYA TDGLAIWQAI EQWVTEYCAI YYPNDGVLQG DVELQAWWKE VREVGHGDLK DADWWPKMQS LPELTKACTT
701: IIWIASALHA AVNFGQYPYA GYLPNRPTIS RRPMPEPGSK EYTELDENPE KFFIRTITSQ FQTILGVSLI EILSKHSADE IYLGQRDTPE WTSDPKALEA
801: FKRFSRQLVE IESKVLNMNK DPLLKNRVGP ANFPYTLMFP NTSDNKGAAE GITARGIPNS ISI

Best Arabidopsis Sequence Match ( AT3G22400.1 )
(BLAST)

001: MIHTDIAEIL CVKPKTTKKT KTMEEDVKKT TTMKIEGEVV VMKKNLLDFK DVMASLLDRV NELLGRRVSL HLISSHQPDP ANEKRGRLGK AAHLEKWVTK
101: IKTSVTAEET AFGVTFDWDE SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS NKAYLPSETP ELIKELREEE
201: LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK
301: SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV
401: ISRLQEFPPK SCLDSAKYGN QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL QADGTLKPLA IELSLPHAQG
501: ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV
601: FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH
701: GDKRHESWWP SMQTRDDLIE TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT ITPQLQTLLG ISIIEILSMH
801: STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI

Arabidopsis Description

LOX5Linoleate 9S-lipoxygenase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.