Factsheet for Bra039948.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38326	Canola	cytosol	98.08	98.08
AT3G22400.1	Thale cress	cytosol	92.11	92.21
Bra023829.1-P	Field mustard	cytosol	92.67	91.03
KRH35534	Soybean	cytosol	36.3	71.88
KRG91271	Soybean	cytosol	66.52	68.76
VIT_05s0020g03170.t01	Wine grape	cytosol	66.18	67.01
PGSC0003DMT400081370	Potato	cytosol	65.84	66.59
Solyc09g075860.2.1	Tomato	cytosol, nucleus	65.16	65.91
GSMUA_Achr1P22970_001	Banana	cytosol	61.56	64.54
Solyc09g075870.1.1	Tomato	cytosol	61.89	64.29
KRG88464	Soybean	cytosol	32.81	63.82
Bra021322.1-P	Field mustard	cytosol	61.33	63.48
TraesCS4A01G275800.1	Wheat	cytosol	16.91	62.76
TraesCS4A01G359800.1	Wheat	cytosol	36.75	61.39
Os03t0700400-00	Rice	cytosol, plasma membrane	8.68	61.11
GSMUA_AchrUn_...	Banana	cytosol	53.78	60.84
GSMUA_Achr1P24370_001	Banana	cytosol	57.16	59.86
GSMUA_AchrUn_...	Banana	cytosol	57.16	59.3
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	57.95	58.61
TraesCS6D01G122000.1	Wheat	cytosol	20.41	58.39
EER93611	Sorghum	cytosol	57.38	57.32
Os03t0699700-01	Rice	cytosol, plastid	55.58	57.13
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	56.93	56.93
TraesCS4B01G037800.1	Wheat	cytosol	56.26	56.83
Zm00001d033624_P001	Maize	cytosol	56.71	56.71
TraesCS4A01G275900.1	Wheat	cytosol, unclear	55.92	56.49
EER93612	Sorghum	cytosol	55.13	56.47
TraesCS4D01G035100.1	Wheat	cytosol	55.69	56.26
GSMUA_Achr6P25090_001	Banana	cytosol	53.1	56.21
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	55.47	56.04
GSMUA_Achr6P25110_001	Banana	cytosol	50.06	55.92
Zm00001d033623_P003	Maize	cytosol	54.57	55.82
Os03t0738600-01	Rice	plasma membrane, plastid	54.68	55.75
TraesCS5A01G378800.2	Wheat	cytosol	48.82	55.66
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	53.89	55.32
TraesCS5B01G382300.1	Wheat	cytosol, unclear	53.89	55.32
GSMUA_Achr9P19250_001	Banana	plasma membrane	59.3	55.31
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	53.78	55.21
TraesCS5A01G378700.1	Wheat	cytosol	53.66	55.09
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	53.44	55.05
KXG37783	Sorghum	cytosol	55.13	54.76
TraesCS4B01G037700.3	Wheat	cytosol, golgi	53.1	54.7
TraesCS3B01G602500.1	Wheat	cytosol	54.23	54.6
TraesCS5B01G382400.1	Wheat	cytosol, golgi	52.54	54.44
TraesCS4D01G035200.1	Wheat	cytosol	50.85	54.4
HORVU5Hr1G093770.1	Barley	cytosol	52.54	54.0
EES04025	Sorghum	cytosol	52.65	53.8
TraesCS3B01G605700.1	Wheat	cytosol	53.55	53.67
TraesCS5B01G382600.1	Wheat	cytosol	52.09	53.66
TraesCS5A01G378900.1	Wheat	cytosol	52.2	53.59
EES04028	Sorghum	cytosol	52.65	53.49
Zm00001d042541_P002	Maize	cytosol	52.99	53.17
Zm00001d042540_P008	Maize	cytosol	52.65	52.35
TraesCS6B01G160400.1	Wheat	mitochondrion	51.3	52.12
TraesCS6A01G132500.1	Wheat	mitochondrion	51.3	52.12
TraesCS6A01G132200.1	Wheat	mitochondrion	51.3	52.12
TraesCS5A01G379000.1	Wheat	nucleus, unclear	45.1	51.95
TraesCS5D01G388800.1	Wheat	cytosol	52.31	51.73
TraesCS5D01G513100.1	Wheat	cytosol	50.28	51.38
GSMUA_Achr6P25080_001	Banana	cytosol	44.64	51.1
Os11t0575600-01	Rice	mitochondrion	49.61	50.69
HORVU5Hr1G117110.1	Barley	cytosol	50.62	50.62
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	27.85	50.61
TraesCS6B01G395700.1	Wheat	cytosol	45.43	49.63
TraesCS6D01G121900.1	Wheat	mitochondrion	22.32	44.3
Bra016602.1-P	Field mustard	cytosol	42.05	40.59
Bra030988.1-P	Field mustard	cytosol, mitochondrion, plastid	41.94	40.48
Bra008037.1-P	Field mustard	plastid	40.92	39.5
Bra004060.1-P	Field mustard	plastid	39.35	38.82
Bra004059.1-P	Field mustard	plastid	37.88	38.8
Bra004057.1-P	Field mustard	cytosol	38.56	38.38
Bra003526.1-P	Field mustard	plastid	38.78	38.05
Bra004081.1-P	Field mustard	plastid	38.67	37.36
Bra022535.1-P	Field mustard	plastid	33.93	37.11
Bra033991.1-P	Field mustard	plastid	37.88	36.8
Bra004058.1-P	Field mustard	plastid	39.23	32.89
GSMUA_Achr6P25100_001	Banana	cytosol	44.42	3.28

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
EnsemblPlantsGene:Bra039948	EnsemblPlants:Bra039948.1	EnsemblPlants:Bra039948.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408	GO:GO:0046872	GO:GO:0051213
GO:GO:0055114	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C
InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	UniProt:M4FFS4	PFAM:PF00305
PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081
PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF53	SMART:SM00308	SUPFAM:SSF48484
SUPFAM:SSF49723	UniParc:UPI0002547512	SEG:seg	:	:	:

Description

AT3G22400 (E=0.0) LOX5 | LOX5; electron carrier/ iron ion binding / lipoxygenase/ metal ion binding / oxidoreductase, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

Coordinates

chrA05:-:15486021..15491050

Molecular Weight (calculated)

101406.0 Da

IEP (calculated)

6.935

GRAVY (calculated)

-0.494

Length

887 amino acids

Sequence
(BLAST)

001: MIHTDIAEIL CVKPKTEKRT KTMEEDVKKK KNKKTMKIEG EVVVMKKNLL DFKDAMASFL DRVHELLGRR VSLHLVSSLQ PDPANEKRGR LGKAAHLEKW
101: VTKIKTSVTA EETAFAVTFD WDESMGPPAA FVIKNHHHSQ FYLKSLTLRN FPGGEGGPIH FVCNSWIYPS HRYRSDRVFF SNKAYLPNET PELLKELRKE
201: ELKNLRDNEK GGELKEWDRV YDYAYYNDLG VPDKGPDSAR PVLGGSPDFP YPRRGKTGRK PTKSDPKSES RLALLNLNIY VPRDERFSHV KFSDFLAYAL
301: KSVTQVLVPE IASVCDKTIN EFDSFEDVFH LYDGSIKLAN GHTISKLRDV IPWEMFRELV RNDGERFLKF PLPDVLKESR SAWRTDEEFA REMLAGLNPV
401: IISRLQEFPP KSNLDSTRYG NQHSSIREEH IKPHMNGLSV QEALGQNKLY ILDHHDALMP YLTRINSTNT KTYATRTLLL LQEDGTLKPL AIELSLPHAQ
501: GESHGAVSKI FTPAEKGVEG SVWQLAKAYA AVNDSGYHQL ISHWLKTHAV IEPFIIASNR QLSVVHPIYK LLHPHFRDTM NINALARHVL INSDGVLERT
601: VFPGRYAMEM SSSIYKNWVF TDQALPKDLL KRGVAVENPS SDNGVELLIE DYPFAVDGLE IWSAIKTWVR EYCTIYYKND KSVQNDTEIQ EWWNELRTKG
701: HGDLQHESWW PSMQTCDDLI EACTIIIWVA SALHAAVNFG QYPYAGFLPN RPTVSRRFMP EPGTEEYAEL EENEEVAFLK TITPQLQTLL GISIIEILSM
801: HSTDEIYLGQ RDSPNWTADD EPLEAFKRFG KSLELIENNI IRRNNDKKFK NRTGPVNIPY TLLYPNTTDY TREGGLTGKG IPNSVSI

Best Arabidopsis Sequence Match ( AT3G22400.1 )
(BLAST)

001: MIHTDIAEIL CVKPKTTKKT KTMEEDVKKT TTMKIEGEVV VMKKNLLDFK DVMASLLDRV NELLGRRVSL HLISSHQPDP ANEKRGRLGK AAHLEKWVTK
101: IKTSVTAEET AFGVTFDWDE SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS NKAYLPSETP ELIKELREEE
201: LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK
301: SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV
401: ISRLQEFPPK SCLDSAKYGN QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL QADGTLKPLA IELSLPHAQG
501: ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV
601: FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH
701: GDKRHESWWP SMQTRDDLIE TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT ITPQLQTLLG ISIIEILSMH
801: STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI

Arabidopsis Description

LOX5Linoleate 9S-lipoxygenase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.