Factsheet for GSMUA_Achr1P24370_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	87.6	94.64
GSMUA_AchrUn_...	Banana	cytosol	91.74	90.88
KRH35534	Soybean	cytosol	36.01	68.08
CDY70916	Canola	cytosol	40.38	67.86
GSMUA_Achr6P25110_001	Banana	cytosol	62.22	66.37
GSMUA_Achr6P25090_001	Banana	cytosol	65.53	66.23
PGSC0003DMT400063654	Potato	cytosol	37.9	65.38
VIT_14s0128g00780.t01	Wine grape	cytosol	66.0	65.08
GSMUA_Achr1P22970_001	Banana	cytosol	64.46	64.54
GSMUA_Achr9P19250_001	Banana	plasma membrane	72.14	64.25
VIT_14s0128g00790.t01	Wine grape	cytosol	65.88	64.21
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	63.16	62.06
PGSC0003DMT400028158	Potato	cytosol	63.05	61.95
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	62.81	61.86
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	62.69	61.67
PGSC0003DMT400054145	Potato	cytosol	62.46	61.66
KRH33939	Soybean	cytosol, endoplasmic reticulum	62.57	61.27
KRH68548	Soybean	cytosol	61.98	61.19
KRG91271	Soybean	cytosol	61.63	60.84
PGSC0003DMT400063446	Potato	cytosol	57.38	60.45
Solyc01g099180.2.1	Tomato	cytosol	60.8	60.3
Bra021322.1-P	Field mustard	cytosol	60.92	60.21
VIT_06s0004g01580.t01	Wine grape	cytosol	23.73	60.0
AT1G55020.1	Thale cress	cytosol	60.57	59.72
PGSC0003DMT400063469	Potato	cytosol	59.39	59.67
PGSC0003DMT400081370	Potato	cytosol	61.75	59.64
Solyc09g075860.2.1	Tomato	cytosol, nucleus	61.51	59.41
GSMUA_Achr6P25080_001	Banana	cytosol	54.31	59.35
KRH16725	Soybean	cytosol	16.17	59.31
Solyc01g099200.2.1	Tomato	cytosol, plastid	58.8	59.22
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	59.62	58.86
VIT_05s0020g03170.t01	Wine grape	cytosol	60.57	58.56
KRH62399	Soybean	cytosol, endoplasmic reticulum	16.29	58.47
PGSC0003DMT400063461	Potato	cytosol	47.58	58.07
PGSC0003DMT400063452	Potato	cytosol	54.66	57.95
AT3G22400.1	Thale cress	cytosol	60.21	57.56
CDY46325	Canola	cytosol	59.86	57.48
KRH57987	Soybean	cytosol	17.47	57.36
CDY38326	Canola	cytosol	59.98	57.27
KRH23266	Soybean	cytosol	55.84	57.26
PGSC0003DMT400063477	Potato	cytosol	57.85	57.24
Solyc01g099210.2.1	Tomato	cytosol	58.32	57.24
Bra039948.1-P	Field mustard	cytosol	59.86	57.16
KRH62403	Soybean	cytosol, endoplasmic reticulum	15.23	56.83
KRH10050	Soybean	endoplasmic reticulum	57.5	56.83
KRH44097	Soybean	cytosol, endoplasmic reticulum	57.73	56.34
Solyc09g075870.1.1	Tomato	cytosol	56.67	56.21
KRH44093	Soybean	endoplasmic reticulum	56.08	56.15
Bra023829.1-P	Field mustard	cytosol	59.86	56.15
KRH44095	Soybean	endoplasmic reticulum	57.38	56.12
CDY64191	Canola	cytosol	59.86	55.9
KRH10051	Soybean	endoplasmic reticulum, nucleus	56.32	55.72
KRH47522	Soybean	endoplasmic reticulum, nucleus	56.91	55.72
KRH10053	Soybean	endoplasmic reticulum	55.96	55.57
KRH44090	Soybean	endoplasmic reticulum	56.32	55.47
KRH23268	Soybean	endoplasmic reticulum	55.84	55.45
KRH23265	Soybean	endoplasmic reticulum, nucleus	56.67	55.43
KRH47525	Soybean	endoplasmic reticulum	56.67	55.3
KRH23269	Soybean	endoplasmic reticulum	52.89	54.5
KRH47066	Soybean	endoplasmic reticulum, nucleus	54.78	54.02
KRG88464	Soybean	cytosol	29.04	53.95
KRH47067	Soybean	endoplasmic reticulum	55.02	53.94
KRH44094	Soybean	endoplasmic reticulum	55.14	53.86
KRH47069	Soybean	endoplasmic reticulum	28.57	53.19
KRH44092	Soybean	nucleus	51.59	50.99
KRH47064	Soybean	endoplasmic reticulum	34.12	50.7
KRH13357	Soybean	endoplasmic reticulum	14.05	49.17
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	28.57	47.36
GSMUA_Achr2P05850_001	Banana	cytosol	45.93	47.27
Solyc01g099150.2.1	Tomato	nucleus	44.63	43.85
CDY43490	Canola	cytosol, plasma membrane	60.8	42.81
GSMUA_Achr8P22700_001	Banana	plastid	40.38	40.33
GSMUA_Achr3P11780_001	Banana	plastid	40.02	40.07
GSMUA_Achr9P16020_001	Banana	plastid	40.5	39.16
GSMUA_Achr3P07870_001	Banana	plastid	40.61	39.14
GSMUA_Achr9P12470_001	Banana	plastid	38.72	38.91
GSMUA_Achr10P...	Banana	cytosol	39.55	38.07
GSMUA_Achr6P28450_001	Banana	plastid	39.08	38.05
GSMUA_Achr6P25100_001	Banana	cytosol	53.25	3.75

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702
GO:GO:0031408	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G24370_001	EnsemblPlants:GSMUA_Achr1P24370_001
EnsemblPlants:GSMUA_Achr1T24370_001	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C
InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	UniProt:M0S2P4	PFAM:PF00305
PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081
PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF53	SMART:SM00308	SUPFAM:SSF48484
SUPFAM:SSF49723	UniParc:UPI0002958294	SEG:seg	:	:	:

Description

Lipoxygenase A [Source:GMGC_GENE;Acc:GSMUA_Achr1G24370_001]

Coordinates

chr1:+:18779492..18782621

Molecular Weight (calculated)

95493.5 Da

IEP (calculated)

6.796

GRAVY (calculated)

-0.261

Length

847 amino acids

Sequence
(BLAST)

001: MASHIVGEKV SGSVVLIRKT GLCFNYCGGT VVDNVLGRCI SFQLVSATVG DANNGNRGVV GEEAYLEQNI TLLPSLAAGE TAYHVTFHCE EKNGIPGAVI
101: VKNNLSSEFF LKTLTIEDFR GKGRIHFVCN SWVYPAGKYK YDRVFFANTT YLPGDTPLPL KPYREEELWN LKGNNVAGQL QEWDRVYRYD YYNDLGSPDT
201: CQDLARPILG GTPEHPYPRR GRTGRPPTKT DPKSESRLPL LNLNIYVPRD EQFGHLKMAD FLMYALKGVV RVVLPVLQAI AGVIPIEFNS FEDVLKLYEG
301: GLPVPPNPLF EELRQLVPFE MIRELRRVQG GQGLLKLPRP HVIEVDKTAW RTDEEFTREM LAGLNPVVIR RLEEFPPTSK LDACKYGDHT STITAAHIEH
401: HLDGLTVQQA LEQNKLFILD HHDAYLPYLN RINALAVKVY ATRTLLYLRQ DSTLKPLAIE LSLPHQDGEQ HGAVSKVYTP AESGVEGSIW QLAKAYAAVT
501: DSAYHGLISH WLNTHAVMEP FVIATHRHLS VIHPIHKLLS PHYRDTMTIN ALARHALICA GGIFELTVFP GRYALELSST VYKSWNFREQ ALPADLIKRG
601: VAVKDRDDRL CLLIEDYPFA VDGLQIWHAI ETWVGEYCAT YYPTDDVVKA DAELQAWWKE VREVGHGDKK DEHWWPAMHT TSELIETCTI IIWIGSALHA
701: AINFGQYPYA GYLPNRPTMS RRFMPEPGTP EYEELKKNPD KVFLKTITSQ LLTVLGLNTI EILSNHASDE VYLGQRDTPE WTSDDRAVKA FERFGKRLKA
801: IEAEIMKKNE DPRLKNRNGP VKMPYTLLFP SSGVGITGKG IPNSISI

Best Arabidopsis Sequence Match ( AT3G22400.1 )
(BLAST)

001: MIHTDIAEIL CVKPKTTKKT KTMEEDVKKT TTMKIEGEVV VMKKNLLDFK DVMASLLDRV NELLGRRVSL HLISSHQPDP ANEKRGRLGK AAHLEKWVTK
101: IKTSVTAEET AFGVTFDWDE SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS NKAYLPSETP ELIKELREEE
201: LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK
301: SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV
401: ISRLQEFPPK SCLDSAKYGN QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL QADGTLKPLA IELSLPHAQG
501: ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV
601: FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH
701: GDKRHESWWP SMQTRDDLIE TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT ITPQLQTLLG ISIIEILSMH
801: STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI

Arabidopsis Description

LOX5Linoleate 9S-lipoxygenase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.