CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68548	Soybean	cytosol	76.53	77.16
VIT_14s0128g00780.t01	Wine grape	cytosol	72.95	73.46
VIT_14s0128g00790.t01	Wine grape	cytosol	72.25	71.92
PGSC0003DMT400028158	Potato	cytosol	69.83	70.07
VIT_06s0004g01580.t01	Wine grape	cytosol	26.94	69.55
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	68.9	69.22
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	68.67	68.91
PGSC0003DMT400063654	Potato	cytosol	38.84	68.43
Bra021322.1-P	Field mustard	cytosol	67.4	68.03
PGSC0003DMT400063446	Potato	cytosol	63.12	67.91
KRH35534	Soybean	cytosol	35.14	67.86
Solyc01g099180.2.1	Tomato	cytosol	66.71	67.56
AT1G55020.1	Thale cress	cytosol	67.05	67.52
PGSC0003DMT400054145	Potato	cytosol	66.71	67.25
PGSC0003DMT400063461	Potato	cytosol	53.87	67.15
CDY70916	Canola	cytosol	39.08	67.06
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	66.24	66.63
PGSC0003DMT400063452	Potato	cytosol	61.04	66.08
GSMUA_Achr1P22970_001	Banana	cytosol	64.28	65.72
PGSC0003DMT400063469	Potato	cytosol	63.81	65.48
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	64.86	65.38
Solyc01g099200.2.1	Tomato	cytosol, plastid	63.47	65.28
PGSC0003DMT400063477	Potato	cytosol	64.28	64.95
KRG91271	Soybean	cytosol	63.93	64.45
Solyc01g099210.2.1	Tomato	cytosol	64.28	64.43
GSMUA_AchrUn_...	Banana	cytosol	62.89	63.63
KRH16725	Soybean	cytosol	16.76	62.77
KRH62399	Soybean	cytosol, endoplasmic reticulum	17.11	62.71
GSMUA_Achr1P24370_001	Banana	cytosol	61.27	62.57
GSMUA_AchrUn_...	Banana	cytosol	56.3	62.12
KRH10050	Soybean	endoplasmic reticulum	61.39	61.96
Os03t0700400-00	Rice	cytosol, plasma membrane	9.02	61.9
KRH23265	Soybean	endoplasmic reticulum, nucleus	61.62	61.55
TraesCS4A01G275800.1	Wheat	cytosol	16.88	61.09
KRH44090	Soybean	endoplasmic reticulum	60.35	60.7
KRH44093	Soybean	endoplasmic reticulum	59.19	60.52
KRH57987	Soybean	cytosol	18.03	60.47
KRH23266	Soybean	cytosol	57.57	60.29
KRH44097	Soybean	cytosol, endoplasmic reticulum	60.35	60.14
KRH44095	Soybean	endoplasmic reticulum	60.0	59.93
KRG88464	Soybean	cytosol	31.45	59.65
GSMUA_Achr6P25110_001	Banana	cytosol	54.68	59.57
GSMUA_Achr6P25090_001	Banana	cytosol	57.57	59.43
KRH23268	Soybean	endoplasmic reticulum	58.5	59.32
KRH47522	Soybean	endoplasmic reticulum, nucleus	59.08	59.08
KRH62403	Soybean	cytosol, endoplasmic reticulum	15.49	59.03
GSMUA_Achr9P19250_001	Banana	plasma membrane	64.74	58.89
KRH10053	Soybean	endoplasmic reticulum	57.8	58.62
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	59.31	58.49
KRH10051	Soybean	endoplasmic reticulum, nucleus	57.8	58.41
TraesCS6D01G122000.1	Wheat	cytosol	20.92	58.39
KRH47066	Soybean	endoplasmic reticulum, nucleus	57.8	58.21
KRH47525	Soybean	endoplasmic reticulum	58.15	57.95
KRH44094	Soybean	endoplasmic reticulum	57.8	57.67
Zm00001d033623_P003	Maize	cytosol	57.8	57.67
KRH47067	Soybean	endoplasmic reticulum	57.57	57.64
TraesCS4A01G359800.1	Wheat	cytosol	35.03	57.06
EER93612	Sorghum	cytosol	57.11	57.04
Os03t0738600-01	Rice	plasma membrane, plastid	57.23	56.9
KRH23269	Soybean	endoplasmic reticulum	53.99	56.81
KRH47069	Soybean	endoplasmic reticulum	29.6	56.26
TraesCS4B01G037800.1	Wheat	cytosol	56.99	56.15
TraesCS4A01G275900.1	Wheat	cytosol, unclear	56.88	56.04
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	57.46	56.03
EER93611	Sorghum	cytosol	57.46	55.97
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	56.76	55.92
TraesCS4D01G035100.1	Wheat	cytosol	56.76	55.92
TraesCS5A01G378800.2	Wheat	cytosol	50.29	55.91
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	55.84	55.9
KRH47064	Soybean	endoplasmic reticulum	36.76	55.79
Zm00001d033624_P001	Maize	cytosol	56.88	55.47
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	55.03	55.28
TraesCS5B01G382400.1	Wheat	cytosol, golgi	54.68	55.26
Os03t0699700-01	Rice	cytosol, plastid	55.03	55.16
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	55.03	55.09
HORVU5Hr1G093770.1	Barley	cytosol	54.91	55.04
EES04028	Sorghum	cytosol	55.49	54.98
TraesCS4B01G037700.3	Wheat	cytosol, golgi	54.68	54.94
TraesCS5A01G378700.1	Wheat	cytosol	54.8	54.86
TraesCS5B01G382300.1	Wheat	cytosol, unclear	54.8	54.86
EES04025	Sorghum	cytosol	55.03	54.84
TraesCS5B01G382600.1	Wheat	cytosol	54.57	54.82
TraesCS4D01G035200.1	Wheat	cytosol	52.49	54.76
KXG37783	Sorghum	cytosol	56.42	54.65
TraesCS5A01G378900.1	Wheat	cytosol	54.34	54.4
Zm00001d042541_P002	Maize	cytosol	55.49	54.3
Zm00001d042540_P008	Maize	cytosol	55.84	54.15
TraesCS6A01G132200.1	Wheat	mitochondrion	54.45	53.95
TraesCS6A01G132500.1	Wheat	mitochondrion	54.45	53.95
TraesCS6B01G160400.1	Wheat	mitochondrion	54.45	53.95
KRH13357	Soybean	endoplasmic reticulum	15.03	53.72
TraesCS3B01G602500.1	Wheat	cytosol	54.34	53.35
GSMUA_Achr6P25080_001	Banana	cytosol	47.51	53.03
TraesCS3B01G605700.1	Wheat	cytosol	54.1	52.88
TraesCS5A01G379000.1	Wheat	nucleus, unclear	47.05	52.86
TraesCS5D01G388800.1	Wheat	cytosol	54.57	52.62
TraesCS5D01G513100.1	Wheat	cytosol	52.25	52.07
KRH44092	Soybean	nucleus	51.56	52.04
HORVU5Hr1G117110.1	Barley	cytosol	52.02	50.73
Os11t0575600-01	Rice	mitochondrion	50.64	50.46
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	29.25	49.51
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	27.86	49.39
TraesCS6B01G395700.1	Wheat	cytosol	46.01	49.01
Solyc01g099150.2.1	Tomato	nucleus	48.67	48.84
CDY43490	Canola	cytosol, plasma membrane	67.05	48.21
TraesCS6D01G121900.1	Wheat	mitochondrion	24.74	47.87
KRH07345	Soybean	cytosol, plastid	44.97	45.18
KRH66214	Soybean	cytosol	45.2	45.15
KRG89889	Soybean	cytosol, plastid	42.89	43.14
KRG89883	Soybean	cytosol, plastid	42.66	42.96
KRH47615	Soybean	nucleus	44.62	41.64
KRH06197	Soybean	nucleus	44.28	41.54
KRH69027	Soybean	plastid	43.12	41.4
KRH29668	Soybean	nucleus	43.35	41.39
KRH29669	Soybean	plastid	43.01	41.29
KRG97300	Soybean	plastid	42.89	41.27
KRH17965	Soybean	plastid	43.58	41.07
KRH10882	Soybean	cytosol	20.58	41.01
KRG89888	Soybean	nucleus	42.77	40.97
KRH42646	Soybean	plastid	42.89	40.28
KRH24671	Soybean	cytosol, plastid	42.54	40.26
KRH18682	Soybean	cytosol, mitochondrion	42.31	40.18
KRH21441	Soybean	cytosol	41.16	39.12
KRH30640	Soybean	cytosol	8.32	38.5
KRH50048	Soybean	cytosol	39.65	37.69
GSMUA_Achr6P25100_001	Banana	cytosol	46.01	3.31

Protein Annotations

Gene3D:1.20.245.10	EntrezGene:100802887	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10
MapMan:50.1.12	EMBL:ACUP02006566	EnsemblPlantsGene:GLYMA_10G153900	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408	GO:GO:0046872	GO:GO:0051213
GO:GO:0055114	UniProt:I1LBB9	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433	EnsemblPlants:KRH33939
ProteinID:KRH33939	ProteinID:KRH33939.1	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf
InterPro:LipOase_Fe_BS	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom
InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095
PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF53	SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723
UniParc:UPI000233CAC2	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:38898571..38904504

Molecular Weight (calculated)

98164.0 Da

IEP (calculated)

5.749

GRAVY (calculated)

-0.375

Length

865 amino acids

Sequence
(BLAST)

001: MFQNIMNAFT TTGDDDNGPG HRVKGTVVLM KKNVLDFNDF SASFLDRLHE FVGKRVSLQL VSSVNVDPGN GNGLKGKLGK PAYLEDWITT IAPLTAGEAA
101: FKVTFEWDEE IGTPGAFIIR NNHHSEFYLK SLTLEDVPGQ GVIRFICNSW VYPADKYEKD RIFFSNKTYL PSETPMPLLK YREEELENLR GNGKGQLQEW
201: DRVYDYALYN DLGNPDKGPQ HARPTLGGSK DYPYPRRGRT SRPPAKSDPK CESRLNIASS LDIYVPRDER FGHLKMADFL AYALKSIVQV LKPEFESLFD
301: STPNEFDKFE DVLKLYEGGI EVPEGILTEV RDNIPAEMLK EIFRSDGQRL LKFPVPQVIA VDKSAWQTDE EFGRELLAGI NPVVIRGLQE FPPASKLDPK
401: IYGNQTSTIT KEHIESNLEG FTVDEAIKER RLFILDLHDA LIPYVKRINS TSTKMYASRT ILFLQDSGTL KPLAIELSLP HPEGDQYGAI SKVYTPVEQG
501: IENSFWQLAK AYVVVADSGY HQLISHWLHT HAVIEPIILA TNRHLSVLHP IHKLLHPHFR DTMNINALGR QILINAGGAL ELTVCPSKYS MEFSSVLYKD
601: WVFPEQALPE DLVKRGVAVK DSTSPYGLRL LIEDYPFAVD GLEIWFAIKT WVKDYCSFYY KEDDTIKKDT ELQSWWKEIR EVGHGDKKDE PWWPKMQTCE
701: ELIQTCTIII WIASALHAAI NFGQYPYGGF PPSRPAISRR FMPEKGTPEY DELVANPDKA YLKTVTSQFL AVLGISLVEI LSKHSSDEVY LGQRDTPDWT
801: SDAEPLQAFE KFGKKLADIE ERILRMNSDE KFRNRYGPVK MPYTLLYPSS KGGLTGMGVP NSISI

Best Arabidopsis Sequence Match ( AT1G55020.1 )
(BLAST)

001: MFGELRDLLT GGGNETTTKK VKGTVVLMKK NVLDFNDFNA SFLDRLHEFL GNKITLRLVS SDVTDSENGS KGKLGKAAHL EDWITTITSL TAGESAFKVT
101: FDYETDFGYP GAFLIRNSHF SEFLLKSLTL EDVPGHGRVH YICNSWIYPA KHYTTDRVFF SNKTYLPHET PATLLKYREE ELVSLRGTGE GELKEWDRVY
201: DYAYYNDLGV PPKNPRPVLG GTQEYPYPRR GRTGRKPTKE DPQTESRLPI TSSLDIYVPR DERFGHLKMS DFLAYALKAI AQFIQPALEA VFDDTPKEFD
301: SFEDVLKIYE EGIDLPNQAL IDSIVKNIPL EMLKEIFRTD GQKFLKFPVP QVIKEDKTAW RTDEEFAREM LAGLNPVVIQ LLKEFPPKSK LDSESYGNQN
401: STITKSHIEH NLDGLTVEEA LEKERLFILD HHDTLMPYLG RVNTTTTKTY ASRTLLFLKD DGTLKPLVIE LSLPHPNGDK FGAVSEVYTP GEGVYDSLWQ
501: LAKAFVGVND SGNHQLISHW MQTHASIEPF VIATNRQLSV LHPVFKLLEP HFRDTMNINA LARQILINGG GIFEITVFPS KYAMEMSSFI YKNHWTFPDQ
601: ALPAELKKRG MAVEDPEAPH GLRLRIKDYP YAVDGLEVWY AIESWVRDYI FLFYKIEEDI QTDTELQAWW KEVREEGHGD KKSEPWWPKM QTREELVESC
701: TIIIWVASAL HAAVNFGQYP VAGYLPNRPT ISRQYMPKEN TPEFEELEKN PDKVFLKTIT AQLQTLLGIS LIEILSTHSS DEVYLGQRDS KEWAAEKEAL
801: EAFEKFGEKV KEIEKNIDER NDDETLKNRT GLVKMPYTLL FPSSEGGVTG RGIPNSVSI

Arabidopsis Description

LOX1Linoleate 9S-lipoxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06327]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.