Factsheet for TraesCS3B01G602500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G605700.1	Wheat	cytosol	92.51	92.09
TraesCS4B01G037800.1	Wheat	cytosol	80.93	81.21
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	72.99	73.32
EER93611	Sorghum	cytosol	69.92	69.37
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	68.79	68.32
Zm00001d033624_P001	Maize	cytosol	68.33	67.87
KXG37783	Sorghum	cytosol	67.08	66.18
CDY70916	Canola	cytosol	36.66	64.09
KRH35534	Soybean	cytosol	32.58	64.06
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	62.54	64.0
TraesCS4B01G037700.3	Wheat	cytosol, golgi	62.43	63.88
GSMUA_Achr1P22970_001	Banana	cytosol	60.95	63.48
TraesCS5B01G382400.1	Wheat	cytosol, golgi	60.16	61.92
PGSC0003DMT400063654	Potato	cytosol	34.39	61.71
VIT_14s0128g00780.t01	Wine grape	cytosol	59.36	60.88
TraesCS5B01G382600.1	Wheat	cytosol	59.48	60.86
TraesCS5B01G382300.1	Wheat	cytosol, unclear	59.36	60.53
VIT_14s0128g00790.t01	Wine grape	cytosol	58.68	59.49
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	56.53	57.77
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	56.19	57.49
PGSC0003DMT400028158	Potato	cytosol	56.19	57.42
VIT_06s0004g01580.t01	Wine grape	cytosol	21.79	57.31
KRH68548	Soybean	cytosol	55.73	57.23
Solyc09g075860.2.1	Tomato	cytosol, nucleus	56.75	57.01
Bra021322.1-P	Field mustard	cytosol	55.39	56.94
PGSC0003DMT400081370	Potato	cytosol	56.64	56.9
TraesCS6B01G160400.1	Wheat	mitochondrion	56.3	56.82
KRG91271	Soybean	cytosol	55.28	56.76
AT1G55020.1	Thale cress	cytosol	55.28	56.69
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	55.28	56.63
Solyc01g099180.2.1	Tomato	cytosol	54.6	56.32
PGSC0003DMT400054145	Potato	cytosol	54.82	56.29
PGSC0003DMT400063446	Potato	cytosol	51.31	56.22
VIT_05s0020g03170.t01	Wine grape	cytosol	55.16	55.48
PGSC0003DMT400063461	Potato	cytosol	43.7	55.48
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	53.92	55.36
KRH62399	Soybean	cytosol, endoplasmic reticulum	14.76	55.08
KRH16725	Soybean	cytosol	14.42	54.98
Solyc09g075870.1.1	Tomato	cytosol	52.89	54.57
KRH33939	Soybean	cytosol, endoplasmic reticulum	53.35	54.34
PGSC0003DMT400063469	Potato	cytosol	51.99	54.33
PGSC0003DMT400063477	Potato	cytosol	52.78	54.32
Bra039948.1-P	Field mustard	cytosol	54.6	54.23
PGSC0003DMT400063452	Potato	cytosol	49.15	54.19
Solyc01g099200.2.1	Tomato	cytosol, plastid	51.65	54.1
CDY46325	Canola	cytosol	54.14	54.08
AT3G22400.1	Thale cress	cytosol	54.37	54.06
CDY38326	Canola	cytosol	54.37	54.0
Solyc01g099210.2.1	Tomato	cytosol	52.67	53.77
KRH57987	Soybean	cytosol	15.66	53.49
Bra023829.1-P	Field mustard	cytosol	54.82	53.49
CDY64191	Canola	cytosol	54.48	52.92
KRH10050	Soybean	endoplasmic reticulum	51.42	52.86
KRH44093	Soybean	endoplasmic reticulum	50.62	52.72
KRH23266	Soybean	cytosol	49.38	52.66
TraesCS6B01G395700.1	Wheat	cytosol	48.47	52.59
KRH23265	Soybean	endoplasmic reticulum, nucleus	51.53	52.42
KRH62403	Soybean	cytosol, endoplasmic reticulum	13.51	52.42
KRH44090	Soybean	endoplasmic reticulum	51.08	52.33
KRH44094	Soybean	endoplasmic reticulum	51.19	52.02
KRH10053	Soybean	endoplasmic reticulum	50.17	51.82
KRH10051	Soybean	endoplasmic reticulum, nucleus	50.28	51.75
KRH47522	Soybean	endoplasmic reticulum, nucleus	50.74	51.68
KRH47525	Soybean	endoplasmic reticulum	50.85	51.61
KRH44095	Soybean	endoplasmic reticulum	50.4	51.27
KRH23268	Soybean	endoplasmic reticulum	49.6	51.23
KRH47067	Soybean	endoplasmic reticulum	49.94	50.93
KRH47066	Soybean	endoplasmic reticulum, nucleus	49.6	50.87
KRH44097	Soybean	cytosol, endoplasmic reticulum	49.72	50.46
KRH23269	Soybean	endoplasmic reticulum	46.77	50.12
KRH13357	Soybean	endoplasmic reticulum	13.51	49.17
KRG88464	Soybean	cytosol	25.43	49.12
KRH47069	Soybean	endoplasmic reticulum	24.63	47.69
KRH47064	Soybean	endoplasmic reticulum	30.53	47.19
KRH44092	Soybean	nucleus	45.4	46.67
TraesCS1B01G226400.1	Wheat	cytosol	44.38	46.33
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	25.77	44.42
Solyc01g099150.2.1	Tomato	nucleus	41.2	42.11
CDY43490	Canola	cytosol, plasma membrane	55.51	40.65
TraesCS6B01G014400.1	Wheat	cytosol	26.33	38.6
TraesCS2B01G333600.1	Wheat	plastid	39.95	38.39
TraesCS4B01G295200.1	Wheat	plastid	39.95	38.14
TraesCS6B01G193400.1	Wheat	plastid	38.37	37.51
TraesCS2B01G555400.2	Wheat	mitochondrion, plastid	38.93	37.0
TraesCS7B01G145200.1	Wheat	plastid	38.93	36.96
TraesCS5B01G006500.1	Wheat	plastid	38.59	36.64
TraesCS5B01G033000.1	Wheat	plastid	37.12	34.42

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016702	GO:GO:0046872	GO:GO:0055114	InterPro:IPR001024	InterPro:IPR013819
InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS
InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf
PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095	PFscan:PS51393
PANTHER:PTHR11771	PANTHER:PTHR11771:SF49	SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723	EnsemblPlantsGene:TraesCS3B01G602500
EnsemblPlants:TraesCS3B01G602500.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:822548132..822555214

Molecular Weight (calculated)

100097.0 Da

IEP (calculated)

6.519

GRAVY (calculated)

-0.392

Length

881 amino acids

Sequence
(BLAST)

001: MLRSTLPLHR VTAKNKEAWR KEASKKKVRI LGRAVLVKSD VLDLGDFHSS LLDGAQKLLD KDDGICFHLV SATLPDPSKG NRGWVGRPAH LQEMVVTNKS
101: TAAGESVFTV TFDSDESQGI PGAVIVRNSH RSEFLLKTLT IDSVPGKRTV VFVANSWIYP NDDRVFFAND TYLPSKMPAP LVQYRRNELI NLQGDGTERE
201: YKEHDRVYRY DYYNDLGEPG RGEMYARPIL GGSQELPYPR RGRTGRGPTK TDPRSESRIP QYKVMNIYVP RDERIGHLKL SDFLGYSLKA ITDAVLPIIR
301: TYVDSTPKEF DSFQDIYDLY DGLLKLPINQ HSKELKNKIP LHFIKSVLPS VGDDFLNLPL PHVIKSDPYA WKSDEEFARE MLAGMNPVCI RRLTEFPVKS
401: TLDPSVYGDQ SSTITEDQIQ QNLEGLTVTQ AMESNRLFIL DHHDNFMPFL DRINKLEGNF IYASRTLLFL KADGTLKPLA IELSLPHPDG LQHGAESRVY
501: VPADERVDGQ IWQLAKAYAC VNDSAWHQLI SHWLNTHAVM EPFVIATNRQ LSVVHPVHKL LSPHYRDTMN INAMARTVLI NAGGLFELTV FPGKYALEMS
601: SVVYKKWKLT EQGLPDDLVK RGMAVRDPSS PYGIRLLLKD YPYAVDGLAI WWAIQQWVKE YLGIYYPNDC VLQADKELKE WWKEVREVGH GDLKDEDWWP
701: KMETVEELAK TCITIIWVAS ALHASVNFGQ YQYAGYLPNR PTVSRQKMPV PGTEEYTQLE RGDEEADRVF IHTISQYLQS ILGLTLIQTL SKHSSDEVYL
801: GQRDTPEWTS DAKALELFER FGTQLVEIEE RITAMNKDPA LKNRNGPVNM PYMLLYPNTS DLTGDRACGL TGMGIPNSVS I

Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)

001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI

Arabidopsis Description

LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.