Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G528500.1 | Wheat | mitochondrion, plastid | 94.71 | 94.71 |
| TraesCS2A01G525500.1 | Wheat | plastid | 92.88 | 92.88 |
| HORVU2Hr1G115960.1 | Barley | plastid | 90.83 | 91.03 |
| HORVU2Hr1G115980.2 | Barley | plastid | 84.57 | 88.89 |
| KXG27309 | Sorghum | mitochondrion, plastid | 59.76 | 61.08 |
| Zm00001d002000_P003 | Maize | cytosol, mitochondrion, plastid | 59.22 | 60.73 |
| TraesCS5B01G382600.1 | Wheat | cytosol | 37.97 | 40.88 |
| TraesCS4B01G037800.1 | Wheat | cytosol | 38.62 | 40.77 |
| TraesCS5B01G382400.1 | Wheat | cytosol, golgi | 37.54 | 40.65 |
| TraesCS4B01G037700.3 | Wheat | cytosol, golgi | 37.65 | 40.53 |
| TraesCS5B01G382300.1 | Wheat | cytosol, unclear | 37.76 | 40.51 |
| TraesCS4B01G037900.1 | Wheat | cytosol, golgi, nucleus, plastid, unclear | 37.54 | 40.42 |
| TraesCS6B01G160400.1 | Wheat | mitochondrion | 37.54 | 39.86 |
| TraesCS3B01G602500.1 | Wheat | cytosol | 37.0 | 38.93 |
| TraesCS3B01G605700.1 | Wheat | cytosol | 37.11 | 38.87 |
| TraesCS6B01G395700.1 | Wheat | cytosol | 33.23 | 37.93 |
| TraesCS1B01G226400.1 | Wheat | cytosol | 34.52 | 37.91 |
| TraesCS2B01G333600.1 | Wheat | plastid | 35.17 | 35.55 |
| TraesCS6B01G014400.1 | Wheat | cytosol | 22.98 | 35.44 |
| TraesCS4B01G295200.1 | Wheat | plastid | 35.06 | 35.21 |
| TraesCS6B01G193400.1 | Wheat | plastid | 33.44 | 34.41 |
| TraesCS5B01G006500.1 | Wheat | plastid | 33.66 | 33.62 |
| TraesCS7B01G145200.1 | Wheat | plastid | 32.47 | 32.44 |
| TraesCS5B01G033000.1 | Wheat | plastid | 31.93 | 31.16 |
| KRH30640 | Soybean | cytosol | 6.15 | 30.48 |
Protein Annotations
| Gene3D:1.20.245.10 | Gene3D:2.60.60.20 | Gene3D:3.10.450.60 | Gene3D:4.10.375.10 | MapMan:50.1.12 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0016702 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR001024 | InterPro:IPR013819 | InterPro:LipOase |
| InterPro:LipOase_C | InterPro:LipOase_CS | InterPro:LipOase_C_sf | InterPro:LipOase_plant | PFAM:PF00305 | InterPro:PLAT/LH2_dom |
| InterPro:PLAT/LH2_dom_sf | PRINTS:PR00087 | PRINTS:PR00468 | ScanProsite:PS00081 | PFscan:PS51393 | PANTHER:PTHR11771 |
| PANTHER:PTHR11771:SF91 | SMART:SM00308 | SUPFAM:SSF48484 | SUPFAM:SSF49723 | EnsemblPlantsGene:TraesCS2B01G555400 | EnsemblPlants:TraesCS2B01G555400.2 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:750013760..750018433
Molecular Weight (calculated)
101872.0 Da
IEP (calculated)
6.303
GRAVY (calculated)
-0.431
Length
927 amino acids
Sequence
(BLAST)
(BLAST)
001: MQMQIRHSSR PCARGPYAPS VTGTRAPGWT ATMLRPAGAL ERRDGQRPTL VPSAARSQLK ILHPSTSPSH GATTATRAVA GSDVQTTSTA TSARVQGKLL
101: LQSSDSPNSP LRLSLQLVSA TVPGSDGRGV RGEAAALDAV ISSGETELDV ELLWDEALGA PGAVLVTNNS DFPVYLQLLS LSSPAVNFVC NGWVYPVGKH
201: PYRLFFTNDA YVKEKTPPAL LKDREDELRL LRGEGSPADK PLQKWDRVYD YALYNDLGNP DLREDLARPV LGGSKEYPYP RRTRTSRPPS KADPASETRA
301: SLEEGIYIPC DERTGGVAAA PNLPKLDGHF GSLADVHGLF DSNAKPFPFP VPQVISANRT AWRTDEEFAR QTLAGANPLS IELVTALTLT SKLDRAVYGD
401: QDSKITKEHI EKNLGNMTVA QAIEKDRLYA VDHHDWVMPY LKRINQLPGA EEKGEISQRK SYATRTLFFL QDDSTLKPLA IELSSPHPKD ERLGATSTVY
501: TPPDELKAGD AASDTFTAWD LAKAHAASND ACKNNYVLHW LRTHATMEPV VLAANRQMSV LHPIHKLLKP HFRNTLDTNS TARHIVIGSG DERQGGAFYR
601: NMHEVNFFTG KYGMEMSSKA YASYNFTELA FPNELIKRGM VRRAPKKNEE VEQPRKDELN ILTAIWKWVT DLLFPNEHIK TGVARGDPKK AEELELLIKD
701: YPYAVDGLEI WTAIKEWVTD YCAIYYADGD GAVAGDSELQ AWWSEVRNVG HGDLRDAPWW PAMDSVDDLV ETCSTIIWLG SAYHSAVSFG QYAYNGFVPN
801: RPTITSGEMP ADAKAAVTEA EFLGSITPKT ETFGLMALTM NPPVKPGEPL MGERPDTEQW TSEQRAAKAL LEFNSKLDAI AEAVKKRNAD GALRNRNGPV
901: EVPYTLLAPR ADPTVPHVGG IPNSIAV
101: LQSSDSPNSP LRLSLQLVSA TVPGSDGRGV RGEAAALDAV ISSGETELDV ELLWDEALGA PGAVLVTNNS DFPVYLQLLS LSSPAVNFVC NGWVYPVGKH
201: PYRLFFTNDA YVKEKTPPAL LKDREDELRL LRGEGSPADK PLQKWDRVYD YALYNDLGNP DLREDLARPV LGGSKEYPYP RRTRTSRPPS KADPASETRA
301: SLEEGIYIPC DERTGGVAAA PNLPKLDGHF GSLADVHGLF DSNAKPFPFP VPQVISANRT AWRTDEEFAR QTLAGANPLS IELVTALTLT SKLDRAVYGD
401: QDSKITKEHI EKNLGNMTVA QAIEKDRLYA VDHHDWVMPY LKRINQLPGA EEKGEISQRK SYATRTLFFL QDDSTLKPLA IELSSPHPKD ERLGATSTVY
501: TPPDELKAGD AASDTFTAWD LAKAHAASND ACKNNYVLHW LRTHATMEPV VLAANRQMSV LHPIHKLLKP HFRNTLDTNS TARHIVIGSG DERQGGAFYR
601: NMHEVNFFTG KYGMEMSSKA YASYNFTELA FPNELIKRGM VRRAPKKNEE VEQPRKDELN ILTAIWKWVT DLLFPNEHIK TGVARGDPKK AEELELLIKD
701: YPYAVDGLEI WTAIKEWVTD YCAIYYADGD GAVAGDSELQ AWWSEVRNVG HGDLRDAPWW PAMDSVDDLV ETCSTIIWLG SAYHSAVSFG QYAYNGFVPN
801: RPTITSGEMP ADAKAAVTEA EFLGSITPKT ETFGLMALTM NPPVKPGEPL MGERPDTEQW TSEQRAAKAL LEFNSKLDAI AEAVKKRNAD GALRNRNGPV
901: EVPYTLLAPR ADPTVPHVGG IPNSIAV
001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
Arabidopsis Description
LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.