Factsheet for HORVU2Hr1G115960.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G555400.2	Wheat	mitochondrion, plastid	91.03	90.83
TraesCS2D01G528500.1	Wheat	mitochondrion, plastid	90.05	89.86
HORVU2Hr1G115980.2	Barley	plastid	85.62	89.8
TraesCS2A01G525500.1	Wheat	plastid	88.65	88.46
Zm00001d002000_P003	Maize	cytosol, mitochondrion, plastid	60.11	61.5
KXG27309	Sorghum	mitochondrion, plastid	59.89	61.08
HORVU3Hr1G047210.1	Barley	cytosol	10.49	44.7
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	38.49	40.55
HORVU5Hr1G093770.1	Barley	cytosol	37.62	40.32
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	37.08	39.7
HORVU1Hr1G054390.4	Barley	cytosol	35.24	38.63
HORVU5Hr1G055110.2	Barley	mitochondrion	14.7	38.53
HORVU5Hr1G117110.1	Barley	cytosol	36.86	38.44
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	19.78	37.5
HORVU4Hr1G076570.6	Barley	cytosol, plastid	34.81	35.15
HORVU7Hr1G050680.1	Barley	peroxisome	25.95	35.09
HORVU6Hr1G033600.1	Barley	plastid	33.62	34.71
HORVU6Hr1G000510.1	Barley	plastid	34.16	33.91
HORVU5Hr1G001180.1	Barley	plastid	33.51	33.3
HORVU7Hr1G006320.4	Barley	plastid	32.22	32.15
KRH30640	Soybean	cytosol	6.27	31.02

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.375.10	MapMan:50.1.12	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702
GO:GO:0031408	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G115960	EnsemblPlants:HORVU2Hr1G115960.1
InterPro:IPR001024	InterPro:IPR013819	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf
InterPro:LipOase_plant	UniProt:M0YNU2	PFAM:PF00305	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087
PRINTS:PR00468	ScanProsite:PS00081	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF91	SMART:SM00308
SUPFAM:SSF48484	SUPFAM:SSF49723	UniParc:UPI000294AC1A	SEG:seg	:	:

Description

Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:M0YNU2]

Coordinates

chrchr2H:+:736295880..736301045

Molecular Weight (calculated)

101967.0 Da

IEP (calculated)

6.827

GRAVY (calculated)

-0.422

Length

925 amino acids

Sequence
(BLAST)

001: MPMQIRHSPR PCASGPHAPS VTGTRAPGWT ATMLRPAGAL EHRDGPRPTL VSSAARSQLK ILHPNSGHGA TRATRAVAGS DVQTSPTATS ARVEGKLLLQ
101: SSDSPNSPLR LSLQLVSATV PGSDGRGVRG EAVALDAVIS KGETELDVEL LWDKALGAPG AVVVTNNSDF PVYLRLLSLS SPAVHFVCNG WVYPVDKHPY
201: RLFFTNDAYV KEKTPAALLK DREDELRLLR GEGLPTDKPL QKWERVYDYA LYNDLGNPDL RKDLARPVLG GSKEYPYPRR TRTSRPPSKA DPASETRAPL
301: EEGIYIPCDE RTGPVAAAPN LPKIDGHFGS LADVHGLFDS NAKPFAFPVP QVISANRTGW RTDEEFARQT LAGANPLSIE LVTEFPLTSK LDRAVYGDQD
401: SKITKEHIQK NLGNMTVAQA IEKKRLFALD HHDWVMPYLK RINELPGAEE KGEISQRKSY ATRTLFFLQD DSTLKPLAIE LSSPHPEDER LGATSTVYTP
501: PDELKAGAAA SNTFTAWELA KAHASSNDAC KNNYVLHWLG THATMEPVVI AANRQLSVLH PIHKLLKPHF RNTLDTNSTA RHIVIGAADQ RQNGGFYRNM
601: HEVNFFASKY GMEMSSKAYA SYNFTELAFP NELIKRGMVR RDPKKNEELE LPRKDEPNIW TAIWKWVTGL LFPSEPIKTG VARGDTKKHE ELELLIKDYP
701: YAVDGMEIWT AIKKWVTDYC AIYYADGDRA VAADSELQAW WSEVRNVGHG DLSDAPWWPA MDCVDDLVET CATIIWLGSA YHSAVSFGQY AYNGFVPNRP
801: TITSGEMPAD SGAVVTEAEF LGSITPRTET FALMALTMNP PVKPGEPLMG ERPDTERWTS EQRAAKALLE FNAKLDAVAE AVKKRNADTT LRNRNGPVEV
901: PYTLLTPRAD PTAPHVGGIP NSIAV

Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)

001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI

Arabidopsis Description

LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.