Factsheet for HORVU2Hr1G115980.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G115960.1	Barley	plastid	89.8	85.62
TraesCS2D01G528500.1	Wheat	mitochondrion, plastid	89.12	84.79
TraesCS2B01G555400.2	Wheat	mitochondrion, plastid	88.89	84.57
TraesCS2A01G525500.1	Wheat	plastid	87.76	83.5
KXG27309	Sorghum	mitochondrion, plastid	62.7	60.97
Zm00001d002000_P003	Maize	cytosol, mitochondrion, plastid	62.47	60.95
HORVU3Hr1G047210.1	Barley	cytosol	10.88	44.24
HORVU5Hr1G093770.1	Barley	cytosol	40.02	40.9
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	39.34	40.16
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	39.91	40.09
HORVU5Hr1G055110.2	Barley	mitochondrion	15.99	39.94
HORVU5Hr1G117110.1	Barley	cytosol	39.34	39.12
HORVU1Hr1G054390.4	Barley	cytosol	37.07	38.74
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	20.98	37.91
HORVU7Hr1G050680.1	Barley	peroxisome	27.78	35.82
HORVU6Hr1G033600.1	Barley	plastid	35.49	34.93
HORVU4Hr1G076570.6	Barley	cytosol, plastid	36.05	34.72
HORVU6Hr1G000510.1	Barley	plastid	35.49	33.58
HORVU5Hr1G001180.1	Barley	plastid	34.81	32.98
HORVU7Hr1G006320.4	Barley	plastid	33.45	31.82
KRH30640	Soybean	cytosol	6.35	29.95

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.375.10	MapMan:50.1.12	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408
GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G115980	EnsemblPlants:HORVU2Hr1G115980.2	InterPro:IPR001024
InterPro:IPR013819	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_plant
UniProt:M0YR24	PFAM:PF00305	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468
ScanProsite:PS00081	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF91	SMART:SM00308	SUPFAM:SSF48484
SUPFAM:SSF49723	UniParc:UPI0002963C1F	SEG:seg	:	:	:

Description

Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:M0YR24]

Coordinates

chrchr2H:+:736366270..736370487

Molecular Weight (calculated)

97301.9 Da

IEP (calculated)

6.246

GRAVY (calculated)

-0.427

Length

882 amino acids

Sequence
(BLAST)

001: MPMQIHYSPR PCARGPHAPS ATATGAPPGW TTTVLRPAGA LERRDGRRPM LVPSAARSQL KILHPNTSHS HGATTATRAV AGSDVQTSPT ATSSRVQGKL
101: LLQSSDSPNS PLRLSLQLVS ATVPGSDGRG VRGEVAALDA VISSGETELD VELLWDEALG APGALLVTNN SDFPVYLQLL SLSSPDVHFL CNGWVYPVDK
201: HPYRLFFTND AYVKEKTPAA LLKDREDELR LLRGEGLPAD KPLQKWERVY DYALYNDLGN PDLRKDLARP VLGGSKEYPY PRRTRTSRPP SKADPASETR
301: ASMEEAIYIP CDERTGPVAS LPIFPKLDGH FGSLADVHGL FDTNAKPFPF PVPQVISANR TGWRTDEEFA RQTLAGANPL SIELVTEFPL TSKLDRAVYG
401: DQDSKITKEH IQKNLGNMNV EQAIEAGRLY TVDHHDWVMP YLKRINELPG TDEKGEISQR KSYATRTLLF LQDDSTLKPL AIELSSPHPE DERLGATSTV
501: YTPSDELKAG GDTFTTWELA KAHVASNDTC KNNYVLHWLR THATMEPVVI AANRQLSVLH PIHRLLKPHF RNTLNTNSTA RHIAIGAGDQ RQSGDLFRNM
601: HEVNYFSGKY GMEMSSKAYS SYNFTQLAFP NELVKRGMAR GDPKYPEELE LLIKDYPYAV DGLEIWTAIK KWVTDYCMIY YADGDSAVAG DSELQAWWSE
701: VRDVGHGDLS DAPWWPAMDC LDDLVETCAT IIWLGSAYHS AVSFGQYAYN GFVPNRPTIT SREMPADAGA VVTEAEFLGS ITPRTEAFGI MALTMKPPVK
801: PGEPLMGERP DTERWTNEQR AAKALLEFNA KLDAVAEAVK KRNADTTLRN RNGPVEVPYT LLAPRADPTA PHVGGIPNSI AV

Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)

001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI

Arabidopsis Description

LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.