CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97300	Soybean	plastid	94.65	19.69
KRH69027	Soybean	plastid	86.63	17.98
KRH06197	Soybean	nucleus	77.54	15.73
KRH47615	Soybean	nucleus	77.54	15.64
KRG88464	Soybean	cytosol	33.16	13.6
KRH47069	Soybean	endoplasmic reticulum	28.34	11.65
KRH47064	Soybean	endoplasmic reticulum	32.09	10.53
KRH42646	Soybean	plastid	49.2	9.99
KRH33939	Soybean	cytosol, endoplasmic reticulum	38.5	8.32
KRH24671	Soybean	cytosol, plastid	40.64	8.32
KRH29668	Soybean	nucleus	40.11	8.28
KRH29669	Soybean	plastid	39.57	8.21
KRH44095	Soybean	endoplasmic reticulum	37.97	8.2
KRH21441	Soybean	cytosol	39.04	8.02
KRH17965	Soybean	plastid	39.04	7.95
KRH44097	Soybean	cytosol, endoplasmic reticulum	36.9	7.95
KRH68548	Soybean	cytosol	36.36	7.93
KRG91271	Soybean	cytosol	36.36	7.93
KRH44093	Soybean	endoplasmic reticulum	35.29	7.8
KRG89889	Soybean	cytosol, plastid	35.83	7.79
KRH23269	Soybean	endoplasmic reticulum	34.22	7.79
KRH10050	Soybean	endoplasmic reticulum	35.29	7.7
KRH10051	Soybean	endoplasmic reticulum, nucleus	34.76	7.59
KRH47522	Soybean	endoplasmic reticulum, nucleus	34.76	7.51
KRH23268	Soybean	endoplasmic reticulum	34.22	7.5
KRH50048	Soybean	cytosol	36.36	7.47
KRG89883	Soybean	cytosol, plastid	33.69	7.33
KRH44090	Soybean	endoplasmic reticulum	33.69	7.33
KRG89888	Soybean	nucleus	35.29	7.31
KRH10053	Soybean	endoplasmic reticulum	33.16	7.27
KRH47525	Soybean	endoplasmic reticulum	33.69	7.26
KRH47066	Soybean	endoplasmic reticulum, nucleus	33.16	7.22
KRH18682	Soybean	cytosol, mitochondrion	34.76	7.14
KRH47067	Soybean	endoplasmic reticulum	32.09	6.94
KRH44094	Soybean	endoplasmic reticulum	32.09	6.92
KRH23266	Soybean	cytosol	29.95	6.78
KRH23265	Soybean	endoplasmic reticulum, nucleus	30.48	6.58
HORVU2Hr1G115980.2	Barley	plastid	29.95	6.35
KRH07345	Soybean	cytosol, plastid	28.88	6.27
HORVU2Hr1G115960.1	Barley	plastid	31.02	6.27
TraesCS2D01G528500.1	Wheat	mitochondrion, plastid	31.02	6.26
TraesCS2B01G555400.2	Wheat	mitochondrion, plastid	30.48	6.15
TraesCS2A01G525500.1	Wheat	plastid	30.48	6.15
TraesCS2D01G528400.1	Wheat	cytosol, mitochondrion	29.95	6.14
KRH66214	Soybean	cytosol	28.34	6.12
KRH44092	Soybean	nucleus	27.81	6.07
Zm00001d002000_P003	Maize	cytosol, mitochondrion, plastid	28.88	5.97
KXG27309	Sorghum	mitochondrion, plastid	28.34	5.84
KRH57987	Soybean	cytosol	1.6	1.16
KRH35534	Soybean	cytosol	2.67	1.12
KRH13357	Soybean	endoplasmic reticulum	1.07	0.83
KRH62403	Soybean	cytosol, endoplasmic reticulum	0.53	0.44
KRH62399	Soybean	cytosol, endoplasmic reticulum	0.0	0.0
KRH16725	Soybean	cytosol	0.0	0.0
KRH10882	Soybean	cytosol	0.0	0.0

Protein Annotations

EntrezGene:100817322	Gene3D:3.10.450.60	MapMan:35.1	Gene3D:4.10.372.10	UniProt:A0A0R0HJJ3	EMBL:ACUP02007051
EnsemblPlantsGene:GLYMA_11G197500	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016702	GO:GO:0046872	GO:GO:0055114	InterPro:IPR013819	InterPro:IPR027433
EnsemblPlants:KRH30640	ProteinID:KRH30640	ProteinID:KRH30640.1	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_C_sf
InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PRINTS:PR00468	PFscan:PS51393	PANTHER:PTHR11771
PANTHER:PTHR11771:SF67	SUPFAM:SSF48484	UniParc:UPI0003DE7842	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:27392424..27395148

Molecular Weight (calculated)

21337.8 Da

IEP (calculated)

6.022

GRAVY (calculated)

-0.317

Length

187 amino acids

Sequence
(BLAST)

001: MSVTDMHAES RVEMPLPMYV PRDEQFDESK LNTFLIKRLK AVVHNLIPGL KASLSANNHD FNRFSDIDDL YSDGLPLQDE ILKKIPLLQV LTKIQECSQG
101: LLKYDTPKII SKDKFSWLRD DEFSRQAIAG VNPVNIEGLK VFPLVSKLDP ETYDHQDSAL KKEHILGQLN GMTVQQAIVE NKLFMVK

Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)

001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI

Arabidopsis Description

LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.