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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 3
  • plastid 3
  • mitochondrion 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:cytosol
ChloroP:plastid
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG98502
KRG98507
KRH46360
KRH46364

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G17420.1 KRG98502 AT4G26630.1 25387881
AT1G17420.1 KRG98507 AT4G26630.1 25387881
AT1G17420.1 KRH46360 AT4G26630.1 25387881
AT1G17420.1 KRH46364 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH30640 Soybean cytosol 19.69 94.65
KRH69027 Soybean plastid 93.55 93.34
KRH06197 Soybean nucleus 78.98 77.01
KRH47615 Soybean nucleus 79.2 76.81
Solyc03g122340.2.1 Tomato cytosol 72.97 72.25
PGSC0003DMT400058933 Potato plastid 73.19 71.99
VIT_09s0002g01080.t01 Wine grape cytosol 72.53 70.33
CDX81825 Canola cytosol 69.74 68.23
AT1G17420.1 Thale cress cytosol, plastid 69.74 68.23
AT1G72520.1 Thale cress plastid 69.74 67.71
Bra030988.1-P Field mustard cytosol, mitochondrion, plastid 69.08 67.57
CDY64617 Canola cytosol 69.08 67.57
CDY21750 Canola cytosol, mitochondrion, plastid 69.08 67.57
CDX96769 Canola cytosol 68.85 67.36
Bra016602.1-P Field mustard cytosol 68.85 67.36
Bra008037.1-P Field mustard plastid 68.41 66.92
CDX82146 Canola plastid 63.18 66.82
CDY49853 Canola plastid 68.3 66.81
HORVU5Hr1G055110.2 Barley mitochondrion 25.7 65.44
GSMUA_Achr9P16020_001 Banana plastid 60.85 62.44
GSMUA_Achr8P22700_001 Banana plastid 58.51 62.03
GSMUA_Achr10P... Banana cytosol 60.51 61.82
GSMUA_Achr3P07870_001 Banana plastid 60.4 61.77
Os04t0447100-01 Rice cytosol 54.39 61.43
Os03t0179900-01 Rice plastid 62.4 61.11
EER95400 Sorghum mitochondrion 61.96 60.28
TraesCS4B01G295200.1 Wheat plastid 60.96 59.37
HORVU4Hr1G076570.6 Barley cytosol, plastid 60.4 59.28
TraesCS4D01G294100.1 Wheat plastid 60.4 58.89
TraesCS4A01G009400.1 Wheat plastid 60.29 58.72
TraesCS2B01G333600.1 Wheat plastid 58.73 57.58
TraesCS2D01G313400.1 Wheat plastid 58.18 57.47
EES10882 Sorghum plastid 59.07 57.47
Zm00001d027893_P001 Maize plastid 61.4 57.02
KRH10882 Soybean cytosol 27.36 56.68
TraesCS2A01G315100.2 Wheat plastid 58.51 55.96
Zm00001d003533_P001 Maize plastid 58.4 55.79
Zm00001d025524_P001 Maize plastid 57.62 55.76
KRH21441 Soybean cytosol 52.84 52.2
KRH50048 Soybean cytosol 52.5 51.87
KRH42646 Soybean plastid 52.39 51.14
KRH35534 Soybean cytosol 22.69 45.54
KRH44093 Soybean endoplasmic reticulum 42.16 44.8
KRG89889 Soybean cytosol, plastid 42.83 44.77
KRH16725 Soybean cytosol 11.46 44.59
KRH24671 Soybean cytosol, plastid 45.05 44.31
KRH29669 Soybean plastid 44.38 44.28
KRH29668 Soybean nucleus 44.49 44.15
KRH62399 Soybean cytosol, endoplasmic reticulum 11.57 44.07
KRG89883 Soybean cytosol, plastid 41.82 43.77
KRH44090 Soybean endoplasmic reticulum 41.82 43.72
KRH23266 Soybean cytosol 40.04 43.58
KRG89888 Soybean nucleus 43.49 43.3
KRH68548 Soybean cytosol 41.27 43.24
KRH62403 Soybean cytosol, endoplasmic reticulum 10.9 43.17
KRH17965 Soybean plastid 44.05 43.14
KRH57987 Soybean cytosol 12.35 43.02
KRH44095 Soybean endoplasmic reticulum 41.38 42.96
KRH23265 Soybean endoplasmic reticulum, nucleus 41.38 42.96
KRH10050 Soybean endoplasmic reticulum 40.93 42.94
KRH33939 Soybean cytosol, endoplasmic reticulum 41.27 42.89
KRH47066 Soybean endoplasmic reticulum, nucleus 40.93 42.84
KRH47522 Soybean endoplasmic reticulum, nucleus 41.16 42.77
KRH10051 Soybean endoplasmic reticulum, nucleus 40.71 42.76
KRH44094 Soybean endoplasmic reticulum 41.16 42.68
KRH47525 Soybean endoplasmic reticulum 41.16 42.63
KRH47067 Soybean endoplasmic reticulum 40.93 42.59
KRH23268 Soybean endoplasmic reticulum 40.16 42.32
KRH44097 Soybean cytosol, endoplasmic reticulum 40.82 42.28
KRH18682 Soybean cytosol, mitochondrion 42.6 42.04
KRH23269 Soybean endoplasmic reticulum 38.38 41.97
KRH10053 Soybean endoplasmic reticulum 39.82 41.97
KRH47069 Soybean endoplasmic reticulum 20.91 41.32
KRH44092 Soybean nucleus 39.04 40.96
KRG91271 Soybean cytosol 38.93 40.79
KRH13357 Soybean endoplasmic reticulum 10.9 40.5
KRH07345 Soybean cytosol, plastid 38.04 39.72
KRH47064 Soybean endoplasmic reticulum 25.14 39.65
KRH66214 Soybean cytosol 38.04 39.49
KRG88464 Soybean cytosol 18.35 36.18
Protein Annotations
Gene3D:1.20.245.10EntrezGene:100811820MapMan:11.7.1.2Gene3D:2.60.60.20Gene3D:3.10.450.60Gene3D:4.10.372.10
Gene3D:4.10.375.10EMBL:ACUP02012183EnsemblPlantsGene:GLYMA_19G263300GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016491GO:GO:0016702GO:GO:0031408GO:GO:0046872GO:GO:0051213
GO:GO:0055114UniProt:I1NCU0InterPro:IPR001024InterPro:IPR013819InterPro:IPR027433EnsemblPlants:KRG97300
ProteinID:KRG97300ProteinID:KRG97300.1InterPro:LipOaseInterPro:LipOase_CInterPro:LipOase_CSInterPro:LipOase_C_sf
InterPro:LipOase_Fe_BSInterPro:LipOase_plantInterPro:Lipoxygenase_dom_3PFAM:PF00305PFAM:PF01477InterPro:PLAT/LH2_dom
InterPro:PLAT/LH2_dom_sfPRINTS:PR00087PRINTS:PR00468ScanProsite:PS00081ScanProsite:PS00711PFscan:PS50095
PFscan:PS51393PANTHER:PTHR11771PANTHER:PTHR11771:SF67SMART:SM00308SUPFAM:SSF48484SUPFAM:SSF49723
UniParc:UPI000233F02ASEG:seg::::
Description
hypothetical protein
Coordinates
chr19:+:50591397..50596011
Molecular Weight (calculated)
101464.0 Da
IEP (calculated)
7.775
GRAVY (calculated)
-0.291
Length
899 amino acids
Sequence
(BLAST)
001: MAIAKQLMGF SSFVSASSKV FLHNKHGIFW VNPILLPLEN TRLRMGAKFP VAAISEDLIK TTLTVHAKKP LQFKVRAVVT VRNKIKEDFK ETMLKHLDAI
101: NDSIGTRNVV LELISTEIDP KTKSPKKSSK AALMDWSKKS NVKAERVNYT TEFIVDSNFG VPGAITVTNK HQREFFLESI TIEGFVSGAV HFPCKSWVQG
201: ERIFFSNKTY LPGDTPAGLR VLREKELINL RGDGKGVRTL SDRIYDFDTY NDLGNPDEGV ELTRPTLGGS QNHPYPRRCR TGRAPTDTDM HAESRVEMPL
301: PMYVPRDEQF DESKLNTFVI KRLKAVVHNL IPGLKASLSA NNHDFNRFSD IDDLYSDGLP LQDEILKKIP LLQVLTKIQE CSQGLLKYDT PKIISKDKFA
401: WLRDDEFARQ AIAGVNPVNI EGLKVFPPVS KLDPEIYGHQ DSALKEEHIL GQLNGMTVQQ AIVENKLFMV NYHDVYVPFL DGINALDGRK SYATRTIFFL
501: TPLGTLKPIA IELSLGPSSG WKRVVTPPVD ATTNWKWQLA KAHVCANDAG VHQLVNHWLR THACMEPFIL SAHRQLSAMH PVFKLLDPHM RYTLDINALA
601: RQKLINADGI IESCFTPGRY CMEISCGAYK NGWSFDMEGL PADLMRRGMA VPDPTQPNGV KLLIEDYPYA TDGLLIWSAI ENWVRTYVNH YYRHASLICN
701: DKELQAWYSE SINVGHADLR HQRCWPTLNN SEDLVSILTT LIWTVSAQHA AINFGQYPYG GYVPNRPPLM RRLIPFPEDE AEYANFLADP QKYFLNALPS
801: VLQATKYMSI VDILSTHSSD EEYLGERRHS SIWSGDADIT EAFCSFSAEI RRIEKEIERR NLDPSLRNRC GAGVLPYELL APTSRPGVTC RGIPNSVST
Best Arabidopsis Sequence Match ( AT1G72520.1 )
(BLAST)
001: MALANEIMGS RLIFERSSSL ASPFHSRFSI KKKTQRTQFS INPFDPRPMR AVNSSGVVAA ISEDLVKTLR ISTVGRKQEK EEEEEKSVKF KVRAVATVRN
101: KNKEDFKETL VKHLDAFTDK IGRNVVLELM STQVDPKTNE PKKSKAAVLK DWSKKSNSKA ERVHYTAEFT VDSAFGSPGA ITVTNKHQKE FFLESITIEG
201: FACGPVHFPC NSWVQSQKDH PSKRILFTNQ PYLPSETPSG LRTLREKELE NLRGNGKGER KLSDRIYDYD VYNDIGNPDI SRELARPTLG GREFPYPRRC
301: RTGRSSTDTD MMSERRVEKP LPMYVPRDEQ FEESKQNTFA ACRLKAVLHN LIPSLKASIL AEDFANFGEI DSLYKEGLLL KLGFQDDMFK KFPLPKIVTT
401: LQKSSEGLLR YDTPKIVSKD KYAWLRDDEF ARQAIAGINP VNIERVTSYP PVSNLDPEIY GPGLHSALTE DHIIGQLDGL TVQQALETNR LFMVDYHDIY
501: LPFLDRINAL DGRKAYATRT ILFLTRLGTL KPIAIELSLP SQSSSNQKSK RVVTPPVDAT SNWMWQLAKA HVGSNDAGVH QLVNHWLRTH ACLEPFILAA
601: HRQLSAMHPI FKLLDPHMRY TLEINAVARQ TLISADGVIE SCFTAGQYGL EISSAAYKNK WRFDMEGLPA DLIRRGMAVP DPTQPHGLKL LVEDYPYAND
701: GLLLWSAIQT WVRTYVERYY ANSNLIQTDT ELQAWYSESI NVGHADHRDA EWWPKLSTVE DLVSVITTII WLASAQHAAL NFGQYPYGGY VPNRPPLMRR
801: LIPDESDPEF TSFIEDPQKY FFSSMPSLLQ TTKFMAVVDT LSTHSPDEEY IGERQQPSIW TGDAEIVDAF YGFSAEIGRI EKEIDKRNRD PSRRNRCGAG
901: VLPYELMAPS SEPGVTCRGV PNSVSI
Arabidopsis Description
LOX4Lipoxygenase 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FNX8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.