CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 1
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07345	Soybean	cytosol, plastid	94.0	94.54
PGSC0003DMT400074322	Potato	cytosol	33.26	65.16
Solyc09g055900.2.1	Tomato	cytosol	33.72	63.2
VIT_07s0141g00340.t01	Wine grape	cytosol, plastid	42.38	57.52
VIT_07s0289g00010.t01	Wine grape	cytosol	29.56	53.67
GSMUA_Achr2P05850_001	Banana	cytosol	50.81	53.46
KRH35534	Soybean	cytosol	27.25	52.68
TraesCS1B01G226400.1	Wheat	cytosol	48.96	50.24
TraesCS1D01G215800.2	Wheat	cytosol	49.08	50.24
TraesCS1A01G212900.1	Wheat	cytosol	48.85	50.12
HORVU1Hr1G054390.4	Barley	cytosol	48.38	49.64
Os05t0304600-01	Rice	plastid	47.81	48.88
KXG24148	Sorghum	cytosol	48.15	48.66
Zm00001d041204_P001	Maize	cytosol	47.23	48.12
KRH16725	Soybean	cytosol	12.7	47.62
KRH62399	Soybean	cytosol, endoplasmic reticulum	12.82	47.03
KXG23911	Sorghum	cytosol, plastid	29.21	46.42
KRH68548	Soybean	cytosol	45.38	45.8
KRH33939	Soybean	cytosol, endoplasmic reticulum	45.15	45.2
KRH57987	Soybean	cytosol	13.16	44.19
KRH10050	Soybean	endoplasmic reticulum	43.53	43.99
KRH44093	Soybean	endoplasmic reticulum	42.15	43.14
KRG91271	Soybean	cytosol	42.61	43.01
KRH10051	Soybean	endoplasmic reticulum, nucleus	42.49	42.99
KRH44095	Soybean	endoplasmic reticulum	42.84	42.84
KRH44090	Soybean	endoplasmic reticulum	42.38	42.67
KRH44097	Soybean	cytosol, endoplasmic reticulum	42.61	42.51
KRH47066	Soybean	endoplasmic reticulum, nucleus	42.03	42.37
KRH10053	Soybean	endoplasmic reticulum	41.69	42.32
Solyc09g055890.2.1	Tomato	cytosol	18.13	42.32
KRH47522	Soybean	endoplasmic reticulum, nucleus	42.26	42.31
KRH62403	Soybean	cytosol, endoplasmic reticulum	11.09	42.29
KRH23268	Soybean	endoplasmic reticulum	41.45	42.09
KRH44094	Soybean	endoplasmic reticulum	41.92	41.87
KRH23266	Soybean	cytosol	39.72	41.65
PGSC0003DMT400074324	Potato	cytosol	16.51	41.33
KRH13357	Soybean	endoplasmic reticulum	11.55	41.32
KRH47525	Soybean	endoplasmic reticulum	41.22	41.13
KRH23269	Soybean	endoplasmic reticulum	38.91	41.0
KRH47069	Soybean	endoplasmic reticulum	21.48	40.88
KRH47067	Soybean	endoplasmic reticulum	40.65	40.74
KRH23265	Soybean	endoplasmic reticulum, nucleus	39.95	39.95
KRH47064	Soybean	endoplasmic reticulum	26.21	39.82
KRH44092	Soybean	nucleus	38.68	39.09
KRH10882	Soybean	cytosol	19.4	38.71
KRH69027	Soybean	plastid	40.07	38.51
KRG97300	Soybean	plastid	39.49	38.04
KRG89883	Soybean	cytosol, plastid	37.53	37.83
KRH29668	Soybean	nucleus	38.34	36.64
KRH47615	Soybean	nucleus	39.15	36.57
KRH06197	Soybean	nucleus	38.91	36.55
KRH24671	Soybean	cytosol, plastid	38.57	36.54
KRH42646	Soybean	plastid	38.8	36.48
KRG89889	Soybean	cytosol, plastid	36.03	36.28
KRH21441	Soybean	cytosol	37.64	35.82
KRH17965	Soybean	plastid	37.64	35.51
KRG89888	Soybean	nucleus	36.61	35.11
KRH50048	Soybean	cytosol	36.61	34.84
KRH18682	Soybean	cytosol, mitochondrion	36.37	34.58
KRH29669	Soybean	plastid	35.68	34.3
KRG88464	Soybean	cytosol	18.01	34.21
KRH30640	Soybean	cytosol	6.12	28.34

Protein Annotations

Gene3D:1.20.245.10	EntrezGene:100797946	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10
MapMan:50.1.12	EMBL:ACUP02001923	ncoils:Coil	EnsemblPlantsGene:GLYMA_03G091000	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408	GO:GO:0046872
GO:GO:0051213	GO:GO:0055114	UniProt:I1JMA5	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433
EnsemblPlants:KRH66214	ProteinID:KRH66214	ProteinID:KRH66214.1	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS
InterPro:LipOase_C_sf	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom
InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	PFscan:PS50095	PFscan:PS51393
PANTHER:PTHR11771	PANTHER:PTHR11771:SF59	SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723	UniParc:UPI0002952EEC
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:27013300..27020898

Molecular Weight (calculated)

99486.6 Da

IEP (calculated)

9.045

GRAVY (calculated)

-0.470

Length

866 amino acids

Sequence
(BLAST)

001: MNINGMPKKA SSSVPKWHSS SVTTKMLNNF NPICQATQQS TLKGKFVITH NHSKSIPGKL ISVQIYSGTE VDPETGKGKL SEKACFKQGE SIKHSHDAQT
101: MIYKIKIHVD SHFGTPRAFV IQNQHKKKFF LQSASIETND RIIHFDCNSW IYPIKKTKSD RLFFSNRCCL PSHTPRALVE LRKEELDRLR GNGMGERKEW
201: DRIYDYDCYN DLGDPDKGPE HLRPVLGGSR LFPYPRRGRT GRKHSTAGPS CESRPQPINF DIHVPSDERF GPNKLKELKS NCVHAMVHFL SPKAELLPRR
301: NSANFQSFEE LLDMFSSNRN QKIEGWMRDN LKKLIPVEHL KEINHAMKEN RGQLAIPQII SENEWAWKDD MEFGRQMIAG THPTRIQCLT TFPPQNKFGI
401: QSSIKQSIIE QKLEGWTLSQ AMEHGRIFML DHHDFLIPYL NRINANGVCA YASRTLLFLR SDGMLKPLTI ELSLPGQSPH LEIHRVFLPA KQGTQAALWQ
501: LAKAHVLAND AVYHQLISHW LYTHAVVEPF IIATKRRLSV MHPIHRLLNP HFKDTMHINA LARLILINSG GIFERILFPG EICMQISCDL YKEWRFNEQG
601: LPADLLKRGM AVKDPDKNNP TRIQLLLLDY PYATDGLEIW VAIKEWVKDF CSFFYKDNEA IEGDVELQAW WSEIRTQGHG DKYNDIWWYQ MTTLSNLVES
701: LTTLIWIASA KHASLNYGQY AYNGFPPNRP MLCRKFVPLE GTVEFGEFLK DPDKFFLKML PDRFEMSLAA ALVDVLSRHT CDEVYLGCQQ SPGWIDNEVI
801: QNRFAEFKQE LKEIQTRIMQ RNRDPKLKNR RGPANIEYTL LYPDTSSSSA SASGITGRGI PNSISI

Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)

001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI

Arabidopsis Description

LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.