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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH47064 Soybean endoplasmic reticulum 61.82 94.04
KRH47067 Soybean endoplasmic reticulum 77.05 77.31
KRH47066 Soybean endoplasmic reticulum, nucleus 75.43 76.14
KRH47522 Soybean endoplasmic reticulum, nucleus 73.59 73.76
KRH44090 Soybean endoplasmic reticulum 72.32 72.91
KRH44093 Soybean endoplasmic reticulum 70.13 71.87
KRH47525 Soybean endoplasmic reticulum 71.51 71.43
KRH10050 Soybean endoplasmic reticulum 70.24 71.06
KRH23265 Soybean endoplasmic reticulum, nucleus 69.78 69.86
KRH23266 Soybean cytosol 65.97 69.25
KRH16725 Soybean cytosol 18.34 68.83
KRH47069 Soybean endoplasmic reticulum 36.1 68.79
KRH44095 Soybean endoplasmic reticulum 68.28 68.36
KRH44097 Soybean cytosol, endoplasmic reticulum 68.28 68.2
KRH10051 Soybean endoplasmic reticulum, nucleus 66.67 67.52
KRH62399 Soybean cytosol, endoplasmic reticulum 18.34 67.37
KRH23268 Soybean endoplasmic reticulum 65.63 66.71
KRH10053 Soybean endoplasmic reticulum 65.28 66.35
KRH23269 Soybean endoplasmic reticulum 62.51 65.94
KRH57987 Soybean cytosol 19.03 63.95
KRH62403 Soybean cytosol, endoplasmic reticulum 16.72 63.88
KRH44092 Soybean nucleus 62.28 63.01
TraesCS4A01G275800.1 Wheat cytosol 17.3 62.76
KRH35534 Soybean cytosol 31.83 61.61
KRH68548 Soybean cytosol 58.94 59.56
TraesCS4A01G359800.1 Wheat cytosol 36.22 59.13
KRH13357 Soybean endoplasmic reticulum 16.38 58.68
TraesCS6D01G122000.1 Wheat cytosol 20.88 58.39
KRH33939 Soybean cytosol, endoplasmic reticulum 57.67 57.8
GSMUA_Achr1P22970_001 Banana cytosol 55.25 56.62
GSMUA_AchrUn_... Banana cytosol 50.98 56.38
Os03t0700400-00 Rice cytosol, plasma membrane 8.19 56.35
GSMUA_AchrUn_... Banana cytosol 55.48 56.26
GSMUA_Achr1P24370_001 Banana cytosol 53.86 55.14
KRG91271 Soybean cytosol 54.56 55.13
Os03t0699700-01 Rice cytosol, plastid 54.79 55.04
Os03t0700700-01 Rice cytosol, plasma membrane, plastid 55.48 54.85
GSMUA_Achr6P25110_001 Banana cytosol 50.06 54.66
GSMUA_Achr6P25090_001 Banana cytosol 52.71 54.53
TraesCS4B01G037900.1 Wheat cytosol, golgi, nucleus, plastid, unclear 53.52 53.89
Zm00001d033623_P003 Maize cytosol 53.63 53.63
TraesCS5A01G378800.2 Wheat cytosol 47.98 53.47
EER93612 Sorghum cytosol 53.4 53.46
TraesCS4D01G035200.1 Wheat cytosol 51.1 53.44
TraesCS4B01G037700.3 Wheat cytosol, golgi 52.94 53.31
HORVU4Hr1G005920.1 Barley cytosol, plasma membrane 53.98 53.3
Zm00001d013493_P001 Maize cytosol, extracellular, mitochondrion 54.44 53.21
TraesCS4B01G037800.1 Wheat cytosol 53.86 53.19
EER93611 Sorghum cytosol 54.44 53.15
TraesCS4A01G275900.1 Wheat cytosol, unclear 53.75 53.08
TraesCS4D01G035100.1 Wheat cytosol 53.75 53.08
HORVU5Hr1G093700.3 Barley cytosol, plasma membrane 52.36 52.55
Os03t0738600-01 Rice plasma membrane, plastid 52.71 52.53
KXG37783 Sorghum cytosol 54.09 52.52
HORVU5Hr1G093770.1 Barley cytosol 52.25 52.49
TraesCS5B01G382400.1 Wheat cytosol, golgi 51.79 52.45
TraesCS5B01G382300.1 Wheat cytosol, unclear 52.13 52.31
TraesCS5B01G382600.1 Wheat cytosol 51.9 52.26
TraesCS5A01G378700.1 Wheat cytosol 52.02 52.2
Zm00001d033624_P001 Maize cytosol 53.29 52.09
TraesCS5D01G388700.1 Wheat cytosol, golgi, unclear 51.79 51.97
EES04025 Sorghum cytosol 51.9 51.84
TraesCS5A01G378900.1 Wheat cytosol 51.44 51.62
EES04028 Sorghum cytosol 51.79 51.43
TraesCS3B01G605700.1 Wheat cytosol 52.36 51.3
TraesCS6B01G160400.1 Wheat mitochondrion 51.56 51.2
TraesCS3B01G602500.1 Wheat cytosol 52.02 51.19
TraesCS6A01G132200.1 Wheat mitochondrion 51.44 51.09
TraesCS6A01G132500.1 Wheat mitochondrion 51.44 51.09
GSMUA_Achr9P19250_001 Banana plasma membrane 55.71 50.79
TraesCS5D01G513100.1 Wheat cytosol 50.75 50.69
HORVU5Hr1G054200.1 Barley cytosol, mitochondrion 28.37 50.41
Zm00001d042541_P002 Maize cytosol 51.21 50.23
TraesCS5D01G388800.1 Wheat cytosol 51.9 50.17
TraesCS5A01G379000.1 Wheat nucleus, unclear 44.52 50.13
Zm00001d042540_P008 Maize cytosol 51.33 49.89
HORVU5Hr1G117110.1 Barley cytosol 50.98 49.83
Os11t0575600-01 Rice mitochondrion 48.44 48.39
KRG88464 Soybean cytosol 25.37 48.25
GSMUA_Achr6P25080_001 Banana cytosol 42.79 47.87
TraesCS6B01G395700.1 Wheat cytosol 43.71 46.67
TraesCS6D01G121900.1 Wheat mitochondrion 22.49 43.62
KRG89883 Soybean cytosol, plastid 42.45 42.84
KRG89889 Soybean cytosol, plastid 42.1 42.44
KRH66214 Soybean cytosol 41.87 41.92
KRH69027 Soybean plastid 43.37 41.73
KRH10882 Soybean cytosol 20.88 41.71
KRH07345 Soybean cytosol, plastid 41.29 41.58
KRH06197 Soybean nucleus 44.06 41.43
KRH47615 Soybean nucleus 44.29 41.42
KRH29669 Soybean plastid 43.02 41.4
KRG97300 Soybean plastid 42.68 41.16
KRH42646 Soybean plastid 43.48 40.93
KRH17965 Soybean plastid 43.14 40.74
KRH29668 Soybean nucleus 42.56 40.73
KRG89888 Soybean nucleus 42.33 40.64
KRH18682 Soybean cytosol, mitochondrion 42.45 40.4
KRH24671 Soybean cytosol, plastid 42.45 40.26
KRH21441 Soybean cytosol 39.1 37.25
KRH50048 Soybean cytosol 38.75 36.92
KRH30640 Soybean cytosol 6.92 32.09
GSMUA_Achr6P25100_001 Banana cytosol 41.64 3.01
Protein Annotations
Gene3D:1.20.245.10EntrezGene:100815477Gene3D:2.60.60.20Gene3D:3.10.450.60Gene3D:4.10.372.10Gene3D:4.10.375.10
MapMan:50.1.12EMBL:ACUP02004908EnsemblPlantsGene:GLYMA_08G189500GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016491GO:GO:0016702GO:GO:0031408GO:GO:0046872GO:GO:0051213
GO:GO:0055114UniProt:I1KUQ3InterPro:IPR001024InterPro:IPR013819InterPro:IPR027433EnsemblPlants:KRH44094
ProteinID:KRH44094ProteinID:KRH44094.1InterPro:LipOaseInterPro:LipOase_CInterPro:LipOase_CSInterPro:LipOase_C_sf
InterPro:LipOase_Fe_BSInterPro:LipOase_plantInterPro:Lipoxygenase_dom_3PFAM:PF00305PFAM:PF01477InterPro:PLAT/LH2_dom
InterPro:PLAT/LH2_dom_sfPRINTS:PR00087PRINTS:PR00468ScanProsite:PS00081ScanProsite:PS00711PFscan:PS50095
PFscan:PS51393PANTHER:PTHR11771PANTHER:PTHR11771:SF48SMART:SM00308SUPFAM:SSF48484SUPFAM:SSF49723
UniParc:UPI00023389B4SEG:seg::::
Description
hypothetical protein
Coordinates
chr8:+:15205446..15211324
Molecular Weight (calculated)
97770.2 Da
IEP (calculated)
5.847
GRAVY (calculated)
-0.359
Length
867 amino acids
Sequence
(BLAST)
001: MLGLFDKSHK IKGTVVLMPK SVLDINDLNS VKNGGVGGVV SGIFGAVADV TGQIVDTATA IFSRNVSFKL ISATSTDAKG NGKVGNETFL EKHLPTLPTL
101: GDRRDAYDIH FEWDANFGIP GAFYIRNYTY DEFFLVSVTL EDIPNHGTIH FVCNSWVYNF KDYDKKDRIF FANKTYLPSA TPGPLVKYRE EELKILRGDG
201: TGERKEHERI YDYDVYNDLG NPDEDVKLAR PVLGGSSTYP YPRRVRTGRK ATKKDPKSER PASELYMPRD EKFGHLKSSD FLTYGIKSLS QKLLPSLENV
301: FDSDLTWNEF DSFEEVRDLY EGGIKVPTGV LSDISPIPIF KEIFRTDGES VLQFPPPHVV QVTKSAWMTD DEFAREMIAG VNPNVIRLLK EFPPQSKLDP
401: SLYGDQSSTI TKEHLEINMD GVTVEEALNG QRLFILDYQD AFMPYLTRIN ALPSAKAYAT RTILLLKDDG TLKPLAIELS KPHPSGDNLG AESKVVLPAD
501: QGVESTIWLL AKAHVIVNDS GYHQLMSHWL NTHAVTEPFI IATNRRLSVL HPIYKLLYPH YRDTININGL ARNALINAGG VIEESFLPGR YSIEMSSAVY
601: KNWVFTDQAL PVDLIKRGMA VEDPSSPHGL RLAVEDYPYA VDGLEIWDAI KSWVQEYVSL YYPTDLAIQQ DTELQAWWKE VVEKGHGDLK DKPWWPKMQT
701: RQELIQSCST IIWIASALHA AVNFGQYPYG GFILNRPTLS RRWIPEPGTK EYDEMVESPQ TAYLRTITPK RQTIIDLTVI EILSRHASDE IYLGERDNPN
801: WTSDSKALEA FKKFGSKLAE IEGKITARNK DSNKKNRYGP VQLPYTLLLP TSEEGLTFRG IPNSISI
Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)
001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
Arabidopsis Description
LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.