CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033624_P001	Maize	cytosol	93.81	93.91
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	93.36	93.46
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	78.94	79.93
KXG37783	Sorghum	cytosol	79.84	79.4
TraesCS4B01G037800.1	Wheat	cytosol	74.77	75.63
TraesCS4D01G035100.1	Wheat	cytosol	74.66	75.51
TraesCS4A01G275900.1	Wheat	cytosol, unclear	74.55	75.4
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	74.44	75.28
TraesCS3B01G602500.1	Wheat	cytosol	69.37	69.92
TraesCS3B01G605700.1	Wheat	cytosol	68.58	68.81
KRH35534	Soybean	cytosol	34.46	68.3
EER93612	Sorghum	cytosol	65.99	67.67
GSMUA_Achr1P22970_001	Banana	cytosol	64.08	67.26
CDY70916	Canola	cytosol	37.84	66.67
PGSC0003DMT400063654	Potato	cytosol	36.26	65.58
EES04025	Sorghum	cytosol	63.85	65.32
VIT_14s0128g00780.t01	Wine grape	cytosol	60.92	62.98
EES04028	Sorghum	cytosol	61.71	62.77
VIT_14s0128g00790.t01	Wine grape	cytosol	60.25	61.56
PGSC0003DMT400028158	Potato	cytosol	59.57	61.37
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	59.46	61.32
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	59.23	61.02
Bra021322.1-P	Field mustard	cytosol	58.67	60.79
AT1G55020.1	Thale cress	cytosol	58.22	60.19
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	58.11	60.0
KRG91271	Soybean	cytosol	57.88	59.91
PGSC0003DMT400063446	Potato	cytosol	53.94	59.58
KRH68548	Soybean	cytosol	57.43	59.44
PGSC0003DMT400054145	Potato	cytosol	57.43	59.44
KRH62399	Soybean	cytosol, endoplasmic reticulum	15.77	59.32
Solyc09g075860.2.1	Tomato	cytosol, nucleus	58.22	58.95
PGSC0003DMT400081370	Potato	cytosol	58.22	58.95
Solyc01g099180.2.1	Tomato	cytosol	56.31	58.55
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	56.53	58.51
KRH16725	Soybean	cytosol	15.2	58.44
PGSC0003DMT400063461	Potato	cytosol	45.38	58.07
Solyc01g099200.2.1	Tomato	cytosol, plastid	54.84	57.91
VIT_05s0020g03170.t01	Wine grape	cytosol	57.09	57.88
PGSC0003DMT400063452	Potato	cytosol	51.8	57.57
KRH33939	Soybean	cytosol, endoplasmic reticulum	55.97	57.46
Bra039948.1-P	Field mustard	cytosol	57.32	57.38
VIT_06s0004g01580.t01	Wine grape	cytosol	21.62	57.31
PGSC0003DMT400063469	Potato	cytosol	54.39	57.3
KRH62403	Soybean	cytosol, endoplasmic reticulum	14.64	57.27
Solyc09g075870.1.1	Tomato	cytosol	54.84	57.03
KRH10050	Soybean	endoplasmic reticulum	54.95	56.94
CDY38326	Canola	cytosol	56.87	56.93
CDY46325	Canola	cytosol	56.31	56.69
AT3G22400.1	Thale cress	cytosol	56.53	56.66
KRH23265	Soybean	endoplasmic reticulum, nucleus	55.07	56.47
Solyc01g099210.2.1	Tomato	cytosol	54.84	56.43
PGSC0003DMT400063477	Potato	cytosol	54.17	56.19
KRH44090	Soybean	endoplasmic reticulum	54.39	56.16
KRH47522	Soybean	endoplasmic reticulum, nucleus	54.62	56.07
Bra023829.1-P	Field mustard	cytosol	56.76	55.81
KRH23266	Soybean	cytosol	51.8	55.69
KRH44093	Soybean	endoplasmic reticulum	52.93	55.56
KRH44095	Soybean	endoplasmic reticulum	54.05	55.43
KRH57987	Soybean	cytosol	16.1	55.43
CDY64191	Canola	cytosol	56.53	55.35
KRH47066	Soybean	endoplasmic reticulum, nucleus	53.49	55.3
KRH10051	Soybean	endoplasmic reticulum, nucleus	53.27	55.26
KRH10053	Soybean	endoplasmic reticulum	53.04	55.22
KRH47525	Soybean	endoplasmic reticulum	53.94	55.18
KRH44097	Soybean	cytosol, endoplasmic reticulum	53.38	54.61
KRH44094	Soybean	endoplasmic reticulum	53.15	54.44
KRH23268	Soybean	endoplasmic reticulum	52.25	54.4
KRH47067	Soybean	endoplasmic reticulum	52.59	54.05
KRH23269	Soybean	endoplasmic reticulum	49.44	53.41
KRH47069	Soybean	endoplasmic reticulum	25.9	50.55
KRG88464	Soybean	cytosol	25.9	50.44
KRH13357	Soybean	endoplasmic reticulum	13.63	50.0
KRH47064	Soybean	endoplasmic reticulum	32.09	50.0
KRH44092	Soybean	nucleus	48.09	49.83
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	27.03	46.97
KXG24148	Sorghum	cytosol	44.14	45.74
Solyc01g099150.2.1	Tomato	nucleus	43.58	44.9
CDY43490	Canola	cytosol, plasma membrane	58.67	43.31
KXG23911	Sorghum	cytosol, plastid	25.68	41.83
OQU80925	Sorghum	cytosol	40.2	41.27
KXG27309	Sorghum	mitochondrion, plastid	41.33	40.46
EES10882	Sorghum	plastid	41.22	39.61
EER95400	Sorghum	mitochondrion	40.65	39.07
KXG29701	Sorghum	plastid	40.2	38.93

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
EntrezGene:8063420	UniProt:C5WNU8	EnsemblPlants:EER93611	ProteinID:EER93611	ProteinID:EER93611.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408
GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433
InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS	InterPro:LipOase_plant
InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087
PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771
PANTHER:PTHR11771:SF54	SMART:SM00308	EnsemblPlantsGene:SORBI_3001G125800	SUPFAM:SSF48484	SUPFAM:SSF49723	unigene:Sbi.2583
UniParc:UPI0001A82914	RefSeq:XP_002466613.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:9902653..9909771

Molecular Weight (calculated)

100486.0 Da

IEP (calculated)

6.723

GRAVY (calculated)

-0.447

Length

888 amino acids

Sequence
(BLAST)

001: MFWHGVADRL TGKNKEAWNE GKIRGTVKLV KKEVLDVGDF NASLLDGVHK ILGWDDGVAF QLVSATAADP SDGGRGKVGR AAHLEEAVVS LKSKVDGETV
101: FRVNFDWDES QGIPGAVRVR NLQHAEFFLK TLTLEGVPGR QGGTVVFVAN SWIYPHKLYS QERIFFANDT YLPNKMPAAL VPYRQDELKI LRGDDTPGPY
201: KEHDRVYRYD YYNDLGDPDK GEDNARPILG GSQHPYPRRC RTGRHPTEKD PNSESRLFLL NLNIYVPRDE RFGHLKMSDF LGYSLKAIVE AVLPTLGTFV
301: DDTPKEFDSF EDILGLYELG PEAPNNPLVA EVRKRIPSEF LRSILPNGSH DHPLKMPLPN IIKSDVLKKA PEFKFGWRTD EEFARETLAG VNPVIIKRLT
401: EFPAKSTLDP SQYGDHTSKI TEAHIQHNLE GLSVQNALKN NRLFILDHHD SFMPYLNKIN KLEGNFIYAS RTLLFLKDDG TLKPLAIELS LPHPDGLQHG
501: AVSKVYTPAH TGVEGHIWQL AKAYACVNDS AWHQLISHWL NTHAVIEPFA IATNRQLSVV HPVHKLLSPH YRDTLNINAL ARQTLINAGG IFERTVFPGK
601: YALEMSSDVY KSWNFNEQAL PADLVKRGVA VPDQSSPYGV RLLIKDYPYA VDGLVIWWAI ERWVKEYLDV YYSNDGEVQR DVELQAWWKE VREEAHGDLK
701: DRDWWPRMDT VQQLARSCTT IIWVASALHA AVNFGQYPYA GYLPNRPTVS RRPMPEPGSD EYKKLEAGQK EADKVFIRTI TSQFQTILGI SLIEILSKHS
801: SDEVYLGQRD EPERWTSDAK ALDAFKRFGS RLVEIENRIK TMNDNPTLKN RKGPVEMPYM LLYPNTSDVT GEKGEGLTAM GIPNSISI

Best Arabidopsis Sequence Match ( AT3G22400.1 )
(BLAST)

001: MIHTDIAEIL CVKPKTTKKT KTMEEDVKKT TTMKIEGEVV VMKKNLLDFK DVMASLLDRV NELLGRRVSL HLISSHQPDP ANEKRGRLGK AAHLEKWVTK
101: IKTSVTAEET AFGVTFDWDE SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS NKAYLPSETP ELIKELREEE
201: LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK
301: SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV
401: ISRLQEFPPK SCLDSAKYGN QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL QADGTLKPLA IELSLPHAQG
501: ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV
601: FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH
701: GDKRHESWWP SMQTRDDLIE TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT ITPQLQTLLG ISIIEILSMH
801: STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI

Arabidopsis Description

LOX5Linoleate 9S-lipoxygenase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.