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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 4
  • mitochondrion 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH16725 Soybean cytosol 16.92 62.77
KRH44094 Soybean endoplasmic reticulum 63.01 62.28
KRH62399 Soybean cytosol, endoplasmic reticulum 16.92 61.44
KRH44093 Soybean endoplasmic reticulum 60.33 61.11
KRH47066 Soybean endoplasmic reticulum, nucleus 61.03 60.88
KRH47067 Soybean endoplasmic reticulum 61.38 60.88
KRH35534 Soybean cytosol 31.62 60.49
KRH23266 Soybean cytosol 57.99 60.17
KRH44090 Soybean endoplasmic reticulum 60.21 60.0
KRH10050 Soybean endoplasmic reticulum 59.74 59.74
KRH23265 Soybean endoplasmic reticulum, nucleus 60.21 59.58
TraesCS4A01G275800.1 Wheat cytosol 16.57 59.41
KRH47522 Soybean endoplasmic reticulum, nucleus 59.63 59.08
TraesCS6D01G122000.1 Wheat cytosol 21.35 59.03
KRH57987 Soybean cytosol 17.74 58.91
KRH62403 Soybean cytosol, endoplasmic reticulum 15.52 58.59
KRH44097 Soybean cytosol, endoplasmic reticulum 57.64 56.91
KRH47525 Soybean endoplasmic reticulum 57.41 56.68
KRH23268 Soybean endoplasmic reticulum 56.13 56.39
KRH10053 Soybean endoplasmic reticulum 55.78 56.04
KRH47069 Soybean endoplasmic reticulum 29.64 55.82
KRH44095 Soybean endoplasmic reticulum 56.36 55.77
KRH10051 Soybean endoplasmic reticulum, nucleus 55.54 55.61
TraesCS4A01G359800.1 Wheat cytosol 34.42 55.56
KRH47064 Soybean endoplasmic reticulum 36.52 54.91
KRH23269 Soybean endoplasmic reticulum 52.28 54.5
KRH68548 Soybean cytosol 53.09 53.03
KRH13357 Soybean endoplasmic reticulum 14.82 52.48
GSMUA_AchrUn_... Banana cytosol 47.37 51.79
GSMUA_Achr1P24370_001 Banana cytosol 50.99 51.59
GSMUA_AchrUn_... Banana cytosol 51.46 51.58
KRH33939 Soybean cytosol, endoplasmic reticulum 52.04 51.56
GSMUA_Achr1P22970_001 Banana cytosol 50.17 50.83
KRG91271 Soybean cytosol 50.41 50.35
TraesCS5A01G378800.2 Wheat cytosol 45.62 50.26
GSMUA_Achr6P25110_001 Banana cytosol 46.44 50.13
GSMUA_Achr6P25090_001 Banana cytosol 48.89 50.0
Os03t0699700-01 Rice cytosol, plastid 49.59 49.25
Os03t0700700-01 Rice cytosol, plasma membrane, plastid 50.29 49.14
EER93612 Sorghum cytosol 49.47 48.96
Zm00001d033623_P003 Maize cytosol 49.24 48.67
TraesCS4B01G037900.1 Wheat cytosol, golgi, nucleus, plastid, unclear 48.66 48.43
Os03t0700400-00 Rice cytosol, plasma membrane 7.12 48.41
HORVU5Hr1G093700.3 Barley cytosol, plasma membrane 48.77 48.38
TraesCS5A01G378700.1 Wheat cytosol 48.66 48.26
TraesCS5B01G382300.1 Wheat cytosol, unclear 48.66 48.26
Os03t0738600-01 Rice plasma membrane, plastid 48.89 48.16
TraesCS5D01G388700.1 Wheat cytosol, golgi, unclear 48.54 48.15
TraesCS6A01G132200.1 Wheat mitochondrion 49.01 48.11
TraesCS6A01G132500.1 Wheat mitochondrion 49.01 48.11
TraesCS6B01G160400.1 Wheat mitochondrion 49.01 48.11
EER93611 Sorghum cytosol 49.83 48.09
TraesCS4B01G037700.3 Wheat cytosol, golgi 48.31 48.08
TraesCS5B01G382600.1 Wheat cytosol 48.19 47.97
EES04025 Sorghum cytosol 48.54 47.93
HORVU5Hr1G093770.1 Barley cytosol 48.19 47.86
HORVU5Hr1G054200.1 Barley cytosol, mitochondrion 27.19 47.75
TraesCS5B01G382400.1 Wheat cytosol, golgi 47.61 47.66
TraesCS4D01G035200.1 Wheat cytosol 46.09 47.65
TraesCS4A01G275900.1 Wheat cytosol, unclear 48.66 47.49
KXG37783 Sorghum cytosol 49.47 47.48
TraesCS5A01G378900.1 Wheat cytosol 47.84 47.45
Zm00001d013493_P001 Maize cytosol, extracellular, mitochondrion 49.01 47.35
TraesCS4B01G037800.1 Wheat cytosol 48.42 47.27
TraesCS4D01G035100.1 Wheat cytosol 48.42 47.27
HORVU4Hr1G005920.1 Barley cytosol, plasma membrane 48.31 47.15
TraesCS5D01G513100.1 Wheat cytosol 47.61 47.0
Zm00001d033624_P001 Maize cytosol 48.54 46.9
EES04028 Sorghum cytosol 47.72 46.85
Zm00001d042541_P002 Maize cytosol 48.19 46.72
GSMUA_Achr9P19250_001 Banana plasma membrane 51.34 46.27
TraesCS5A01G379000.1 Wheat nucleus, unclear 41.54 46.23
HORVU5Hr1G117110.1 Barley cytosol 47.84 46.22
Os11t0575600-01 Rice mitochondrion 46.67 46.08
TraesCS5D01G388800.1 Wheat cytosol 48.19 46.04
Zm00001d042540_P008 Maize cytosol 47.61 45.74
TraesCS3B01G605700.1 Wheat cytosol 47.14 45.65
TraesCS3B01G602500.1 Wheat cytosol 46.67 45.4
TraesCS6B01G395700.1 Wheat cytosol 40.14 42.36
GSMUA_Achr6P25080_001 Banana cytosol 38.27 42.32
KRG89889 Soybean cytosol, plastid 41.66 41.51
KRH10882 Soybean cytosol 20.89 41.24
KRG89883 Soybean cytosol, plastid 40.72 40.63
KRG88464 Soybean cytosol 21.24 39.91
KRG89888 Soybean nucleus 42.01 39.87
KRH29668 Soybean nucleus 41.77 39.51
KRH69027 Soybean plastid 41.31 39.29
KRH17965 Soybean plastid 42.01 39.22
KRH47615 Soybean nucleus 42.36 39.16
KRH06197 Soybean nucleus 42.01 39.05
KRG97300 Soybean plastid 40.96 39.04
KRH07345 Soybean cytosol, plastid 38.97 38.79
KRH66214 Soybean cytosol 39.09 38.68
KRH24671 Soybean cytosol, plastid 41.19 38.62
KRH42646 Soybean plastid 41.42 38.55
KRH18682 Soybean cytosol, mitochondrion 40.49 38.09
KRH29669 Soybean plastid 40.02 38.07
TraesCS6D01G121900.1 Wheat mitochondrion 19.72 37.81
KRH21441 Soybean cytosol 37.92 35.71
KRH50048 Soybean cytosol 37.57 35.38
KRH30640 Soybean cytosol 6.07 27.81
GSMUA_Achr6P25100_001 Banana cytosol 37.34 2.66
Protein Annotations
Gene3D:1.20.245.10Gene3D:2.60.60.20Gene3D:3.10.450.60Gene3D:4.10.372.10Gene3D:4.10.375.10MapMan:50.1.12
UniProt:A0A0R0IP85EMBL:ACUP02004908EnsemblPlantsGene:GLYMA_08G189300GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016491GO:GO:0016702GO:GO:0031408GO:GO:0046872GO:GO:0051213
GO:GO:0055114InterPro:IPR001024InterPro:IPR013819InterPro:IPR027433EnsemblPlants:KRH44092ProteinID:KRH44092
ProteinID:KRH44092.1InterPro:LipOaseInterPro:LipOase_CInterPro:LipOase_CSInterPro:LipOase_C_sfInterPro:LipOase_Fe_BS
InterPro:LipOase_plantInterPro:Lipoxygenase_dom_3PFAM:PF00305PFAM:PF01477InterPro:PLAT/LH2_domInterPro:PLAT/LH2_dom_sf
PRINTS:PR00087PRINTS:PR00468ScanProsite:PS00081ScanProsite:PS00711PFscan:PS51393PANTHER:PTHR11771
PANTHER:PTHR11771:SF48SMART:SM00308SUPFAM:SSF48484SUPFAM:SSF49723UniParc:UPI0006EDAA23SEG:seg
Description
hypothetical protein
Coordinates
chr8:+:15185102..15190287
Molecular Weight (calculated)
98690.6 Da
IEP (calculated)
6.546
GRAVY (calculated)
-0.487
Length
857 amino acids
Sequence
(BLAST)
001: MVKGKVVLIR KYVLQTISNA KELVGNGFNL IGSSVEYDIT KSVFFNLISR TKSSKDNYSK DGKEACLENN ASVLRSLGGK EEEFDIYFEW DATEMGIPGA
101: FYVKNHMKDE FFLVSMTLEY PLPTCDRHKD KNSIIHFLCN SWVHNHGCYK THHRIFFDNN PYLPGNQTPE ALRKYREEEL DNLRGDGTGE RKEWDRIYDY
201: DVYNDLGYLD SDEKDDHPIL GGTLYPYPRR VRTGRKLLND KNINGGKYEK PADNVIYVPR DENFSLEKTT DFLEFGKKSL SGKVEPLLLS LYLKLTPNEF
301: NGFEEVQRLY DQEGGIKLPI STTMGTENVL KFPTPHVIQA STFAWMTDEE FAREMIAGVN PNVIRLLKRE DLAPRRRLDC KCNHSTITKE KLEINMGGVT
401: VDEAFCNKRL FILDYYDAFM PYLRKINELD SAKAYATRTF LFLKDDGTLK PLAIELSKPH QCVYVLPHPP HMRPSPFLHY YFPSQVVLPA DKGDDGTIWL
501: LAKAYVVVND TNYHQLISHW LHTHAVMEPF SIATHRQLSV LHPIYKLLHP HFRDTININA LARQSLINAG SIIEQTFLPG KYSMEMSSAV YKNWVFTDQA
601: LPTDLIKRGL AVKDHTSPHG LRLMIKDYPY AVDGLEIWDA IKTWVQEYVN LYYSNDKAVE EDTELQAWWK EVVEKGHGDL KDNEWPKMKT CQELIDSCTI
701: IIWIGSALHA AVNFGQYPYG GYILNRPTQS RRLLPEPKTK EYDEMVKNPQ EAFLRTITPK FQTVIDLTVM EILSSHSSDE IYLGQRDTPN WTSDQNAKDV
801: FETFTKTLAE IEKKISERNN NQELKNRTGP AKFPYTVLLP TSEPGLTFRG IPNSVSI
Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)
001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
Arabidopsis Description
LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.