Factsheet for Zm00001d033623_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93612	Sorghum	cytosol	94.12	94.23
Os03t0700400-00	Rice	cytosol, plasma membrane	13.15	90.48
TraesCS4A01G275800.1	Wheat	cytosol	23.64	85.77
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	84.2	84.79
TraesCS4B01G037700.3	Wheat	cytosol, golgi	83.62	84.2
TraesCS4D01G035200.1	Wheat	cytosol	80.51	84.2
Zm00001d042541_P002	Maize	cytosol	75.78	74.32
Zm00001d042540_P008	Maize	cytosol	73.59	71.52
Zm00001d033624_P001	Maize	cytosol	67.94	66.4
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	67.36	65.84
KRH35534	Soybean	cytosol	33.22	64.29
CDY70916	Canola	cytosol	37.02	63.69
GSMUA_Achr1P22970_001	Banana	cytosol	62.05	63.59
KRH16725	Soybean	cytosol	16.49	61.9
PGSC0003DMT400063654	Potato	cytosol	34.72	61.3
VIT_14s0128g00780.t01	Wine grape	cytosol	60.55	61.12
KRH62399	Soybean	cytosol, endoplasmic reticulum	16.61	61.02
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	60.44	60.86
PGSC0003DMT400028158	Potato	cytosol	60.32	60.67
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	60.32	60.67
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	59.52	60.0
KRH62403	Soybean	cytosol, endoplasmic reticulum	15.69	59.91
PGSC0003DMT400054145	Potato	cytosol	59.28	59.91
VIT_14s0128g00790.t01	Wine grape	cytosol	59.98	59.84
KRH57987	Soybean	cytosol	17.76	59.69
Bra021322.1-P	Field mustard	cytosol	58.71	59.39
PGSC0003DMT400081370	Potato	cytosol	59.17	58.49
PGSC0003DMT400063446	Potato	cytosol	54.21	58.46
Solyc09g075860.2.1	Tomato	cytosol, nucleus	59.05	58.38
KRG91271	Soybean	cytosol	57.67	58.28
VIT_05s0020g03170.t01	Wine grape	cytosol	58.82	58.22
AT1G55020.1	Thale cress	cytosol	57.67	58.21
KRH68548	Soybean	cytosol	57.44	58.04
PGSC0003DMT400063477	Potato	cytosol	57.09	57.83
KRH33939	Soybean	cytosol, endoplasmic reticulum	57.67	57.8
Solyc01g099180.2.1	Tomato	cytosol	56.86	57.73
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	56.98	57.58
Solyc01g099210.2.1	Tomato	cytosol	57.21	57.47
Solyc01g099200.2.1	Tomato	cytosol, plastid	55.71	57.43
PGSC0003DMT400063469	Potato	cytosol	55.36	56.94
PGSC0003DMT400063461	Potato	cytosol	45.44	56.77
KRH10050	Soybean	endoplasmic reticulum	55.59	56.24
KRH23265	Soybean	endoplasmic reticulum, nucleus	55.94	56.0
PGSC0003DMT400063452	Potato	cytosol	51.56	55.94
Solyc09g075870.1.1	Tomato	cytosol	55.02	55.85
KRH23266	Soybean	cytosol	53.17	55.81
KRH44093	Soybean	endoplasmic reticulum	54.44	55.79
KRH10051	Soybean	endoplasmic reticulum, nucleus	54.79	55.49
KRH44095	Soybean	endoplasmic reticulum	55.25	55.31
KRH47066	Soybean	endoplasmic reticulum, nucleus	54.67	55.18
CDY46325	Canola	cytosol	56.06	55.1
AT3G22400.1	Thale cress	cytosol	56.29	55.08
KRH44090	Soybean	endoplasmic reticulum	54.56	55.0
KRH47067	Soybean	endoplasmic reticulum	54.56	54.75
KRH44097	Soybean	cytosol, endoplasmic reticulum	54.79	54.72
KRH10053	Soybean	endoplasmic reticulum	53.75	54.63
CDY38326	Canola	cytosol	55.82	54.57
Bra039948.1-P	Field mustard	cytosol	55.82	54.57
KRH13357	Soybean	endoplasmic reticulum	15.22	54.55
KRH23268	Soybean	endoplasmic reticulum	53.52	54.4
KRH23269	Soybean	endoplasmic reticulum	51.44	54.26
KRH47522	Soybean	endoplasmic reticulum, nucleus	53.98	54.1
VIT_06s0004g01580.t01	Wine grape	cytosol	20.88	54.03
Bra023829.1-P	Field mustard	cytosol	56.17	53.93
KRH44094	Soybean	endoplasmic reticulum	53.63	53.63
CDY64191	Canola	cytosol	56.06	53.58
KRH47525	Soybean	endoplasmic reticulum	53.63	53.57
KRH47069	Soybean	endoplasmic reticulum	27.34	52.09
KRG88464	Soybean	cytosol	26.41	50.22
KRH47064	Soybean	endoplasmic reticulum	32.64	49.65
KRH44092	Soybean	nucleus	48.67	49.24
Zm00001d041204_P001	Maize	cytosol	46.02	46.94
Solyc01g099150.2.1	Tomato	nucleus	43.6	43.85
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	25.61	43.44
CDY43490	Canola	cytosol, plasma membrane	58.59	42.23
Zm00001d002000_P003	Maize	cytosol, mitochondrion, plastid	41.87	40.15
Zm00001d053675_P001	Maize	plastid	41.41	39.67
Zm00001d003533_P001	Maize	plastid	42.56	39.21
Zm00001d025524_P001	Maize	plastid	41.98	39.18
Zm00001d015852_P004	Maize	plastid	40.83	38.86
Zm00001d027893_P001	Maize	plastid	42.33	37.91
Zm00001d031449_P001	Maize	mitochondrion	41.29	37.45

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
EntrezGene:542495	UniProt:A0A1D6L0J1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016702	GO:GO:0046872	GO:GO:0051213
GO:GO:0055114	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C
InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	ProteinID:ONM08081.1	PFAM:PF00305
PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00711
PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF49	SMART:SM00308	SUPFAM:SSF48484
SUPFAM:SSF49723	UniParc:UPI00084506B7	EnsemblPlantsGene:Zm00001d033623	EnsemblPlants:Zm00001d033623_P003	EnsemblPlants:Zm00001d033623_T003	SEG:seg

Description

lipoxygenase3Lipoxygenase

Coordinates

chr1:+:269047817..269052795

Molecular Weight (calculated)

96739.8 Da

IEP (calculated)

6.064

GRAVY (calculated)

-0.321

Length

867 amino acids

Sequence
(BLAST)

001: MLSGIIDGLT GANKHARLKG TVVLMRKNVL DLNDFGATVV DSISEFLGKG VTCQLISSTL VDANNGNRGR VGAEANLEQW LTSLPSLTTG ESKFGVTFDW
101: EVEKLGVPGA VVVKNNHAAE FFLKTITLDD VPGRGAVTFV ANSWVYPAGK YRYNRVFFSN DTYLPSQMPA ALKPYRDDEL RNLRGDDQQG PYQEHDRVYR
201: YDVYNDLGEP DGGNPRPILG GSADHPYPRR CRTGRKPTKT DPNSESRLSL VEQIYVPRDE RFGHLKMSDF LGYSIKAITQ GIIPAVRTYV DTTPGEFDSF
301: QDIINLYEGG IKLPKIQALE DMRKLFPLQL VKDLLPAGGD YLLKLPIPQI IQGTSQDKNA WRTDEEFARE VLAGVNPMVI TRLTEFPPKS TLDPSKYGDH
401: TSTITAEHIE KNLEGLTVQQ ALDGNRLYIL DHHDRFMPFL IDVNNLEGNF IYATRTLFFL RGDGRLAPLA IELSEPYIDG DLTVAKSKVY TPASSGVEAW
501: VWQLAKAYVA VNDSGWHQLV SHWLNTHAVM EPFVIATNRQ LSVTHPVHKL LSSHFRDTMT INALARQTLI NGGGIFEMTV FPGKYALGMS SVVYKSWNFT
601: EQGLPADLVK RGVAVADPSS PYKVRLLIED YPYASDGLAI WHAIEQWVGE YLAIYYPDDG ALRGDEELQA WWKEVREVGH GDHKDAPWWP KMQAVSELAS
701: ACTTIIWIAS ALHAAVNFGQ YPYAGYLPNR PTVSRRRMPE PGSKEYEELE RDPERGFIHT ITSQIQTIIG ISLIEILSKH SSDEVYLGQR DTPEWTSDAR
801: ALAAFKRFSD ALVKIEGKVV GENRDPQLRN RNGPAEFPYM LLYPNTSDHS GAAAGLTAKG IPNSISI

Best Arabidopsis Sequence Match ( AT1G55020.1 )
(BLAST)

001: MFGELRDLLT GGGNETTTKK VKGTVVLMKK NVLDFNDFNA SFLDRLHEFL GNKITLRLVS SDVTDSENGS KGKLGKAAHL EDWITTITSL TAGESAFKVT
101: FDYETDFGYP GAFLIRNSHF SEFLLKSLTL EDVPGHGRVH YICNSWIYPA KHYTTDRVFF SNKTYLPHET PATLLKYREE ELVSLRGTGE GELKEWDRVY
201: DYAYYNDLGV PPKNPRPVLG GTQEYPYPRR GRTGRKPTKE DPQTESRLPI TSSLDIYVPR DERFGHLKMS DFLAYALKAI AQFIQPALEA VFDDTPKEFD
301: SFEDVLKIYE EGIDLPNQAL IDSIVKNIPL EMLKEIFRTD GQKFLKFPVP QVIKEDKTAW RTDEEFAREM LAGLNPVVIQ LLKEFPPKSK LDSESYGNQN
401: STITKSHIEH NLDGLTVEEA LEKERLFILD HHDTLMPYLG RVNTTTTKTY ASRTLLFLKD DGTLKPLVIE LSLPHPNGDK FGAVSEVYTP GEGVYDSLWQ
501: LAKAFVGVND SGNHQLISHW MQTHASIEPF VIATNRQLSV LHPVFKLLEP HFRDTMNINA LARQILINGG GIFEITVFPS KYAMEMSSFI YKNHWTFPDQ
601: ALPAELKKRG MAVEDPEAPH GLRLRIKDYP YAVDGLEVWY AIESWVRDYI FLFYKIEEDI QTDTELQAWW KEVREEGHGD KKSEPWWPKM QTREELVESC
701: TIIIWVASAL HAAVNFGQYP VAGYLPNRPT ISRQYMPKEN TPEFEELEKN PDKVFLKTIT AQLQTLLGIS LIEILSTHSS DEVYLGQRDS KEWAAEKEAL
801: EAFEKFGEKV KEIEKNIDER NDDETLKNRT GLVKMPYTLL FPSSEGGVTG RGIPNSVSI

Arabidopsis Description

LOX1Linoleate 9S-lipoxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06327]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.