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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH44094 Soybean endoplasmic reticulum 94.04 61.82
Os03t0700400-00 Rice cytosol, plasma membrane 12.28 55.56
KRH47069 Soybean endoplasmic reticulum 40.0 50.11
KRH47067 Soybean endoplasmic reticulum 75.09 49.54
KRH47522 Soybean endoplasmic reticulum, nucleus 72.98 48.09
KRH47066 Soybean endoplasmic reticulum, nucleus 71.58 47.5
KRG88464 Soybean cytosol 37.19 46.49
KRH44090 Soybean endoplasmic reticulum 68.07 45.12
KRH47525 Soybean endoplasmic reticulum 68.42 44.93
KRH10050 Soybean endoplasmic reticulum 67.54 44.92
KRH44093 Soybean endoplasmic reticulum 66.67 44.92
KRH23266 Soybean cytosol 63.68 43.95
KRH23269 Soybean endoplasmic reticulum 63.33 43.92
KRH44097 Soybean cytosol, endoplasmic reticulum 66.67 43.78
KRH23265 Soybean endoplasmic reticulum, nucleus 66.49 43.76
KRH44095 Soybean endoplasmic reticulum 66.49 43.76
TraesCS6D01G121900.1 Wheat mitochondrion 34.21 43.62
KRH10051 Soybean endoplasmic reticulum, nucleus 63.68 42.41
KRH10053 Soybean endoplasmic reticulum 61.75 41.27
KRH23268 Soybean endoplasmic reticulum 61.75 41.27
GSMUA_Achr6P25080_001 Banana cytosol 53.33 39.23
KRH68548 Soybean cytosol 55.61 36.95
KRH33939 Soybean cytosol, endoplasmic reticulum 55.79 36.76
KRH44092 Soybean nucleus 54.91 36.52
GSMUA_Achr1P22970_001 Banana cytosol 53.86 36.29
GSMUA_Achr6P25090_001 Banana cytosol 52.46 35.68
GSMUA_AchrUn_... Banana cytosol 52.81 35.2
GSMUA_AchrUn_... Banana cytosol 48.42 35.2
GSMUA_Achr6P25110_001 Banana cytosol 48.07 34.51
KRG91271 Soybean cytosol 51.58 34.27
GSMUA_Achr1P24370_001 Banana cytosol 50.7 34.12
Os03t0700700-01 Rice cytosol, plasma membrane, plastid 51.05 33.18
Zm00001d013493_P001 Maize cytosol, extracellular, mitochondrion 51.23 32.92
Os03t0699700-01 Rice cytosol, plastid 49.65 32.79
Zm00001d033623_P003 Maize cytosol 49.65 32.64
EER93612 Sorghum cytosol 49.3 32.45
TraesCS4B01G037800.1 Wheat cytosol 49.47 32.12
EER93611 Sorghum cytosol 50.0 32.09
KRH30640 Soybean cytosol 10.53 32.09
TraesCS4B01G037900.1 Wheat cytosol, golgi, nucleus, plastid, unclear 48.42 32.06
Zm00001d033624_P001 Maize cytosol 49.65 31.91
HORVU4Hr1G005920.1 Barley cytosol, plasma membrane 49.12 31.89
TraesCS4A01G275900.1 Wheat cytosol, unclear 49.12 31.89
TraesCS4B01G037700.3 Wheat cytosol, golgi 48.07 31.82
TraesCS4D01G035100.1 Wheat cytosol 48.95 31.78
Os03t0738600-01 Rice plasma membrane, plastid 48.42 31.72
KXG37783 Sorghum cytosol 49.65 31.69
GSMUA_Achr9P19250_001 Banana plasma membrane 52.46 31.44
HORVU5Hr1G093700.3 Barley cytosol, plasma membrane 47.54 31.37
HORVU5Hr1G093770.1 Barley cytosol 47.37 31.29
TraesCS4D01G035200.1 Wheat cytosol 45.44 31.24
TraesCS5A01G378700.1 Wheat cytosol 47.19 31.13
TraesCS5B01G382300.1 Wheat cytosol, unclear 47.19 31.13
TraesCS5B01G382600.1 Wheat cytosol 47.02 31.13
TraesCS5D01G388700.1 Wheat cytosol, golgi, unclear 47.02 31.02
EES04025 Sorghum cytosol 47.19 30.99
TraesCS5B01G382400.1 Wheat cytosol, golgi 46.49 30.96
TraesCS3B01G605700.1 Wheat cytosol 47.72 30.73
EES04028 Sorghum cytosol 47.02 30.7
TraesCS6B01G160400.1 Wheat mitochondrion 47.02 30.7
TraesCS5A01G378900.1 Wheat cytosol 46.49 30.67
TraesCS3B01G602500.1 Wheat cytosol 47.19 30.53
TraesCS6A01G132200.1 Wheat mitochondrion 46.67 30.47
TraesCS6A01G132500.1 Wheat mitochondrion 46.67 30.47
Zm00001d042541_P002 Maize cytosol 46.49 29.98
TraesCS5A01G378800.2 Wheat cytosol 40.88 29.95
TraesCS5D01G388800.1 Wheat cytosol 46.84 29.77
Zm00001d042540_P008 Maize cytosol 46.32 29.6
Os11t0575600-01 Rice mitochondrion 44.21 29.03
TraesCS5D01G513100.1 Wheat cytosol 44.21 29.03
HORVU5Hr1G117110.1 Barley cytosol 44.74 28.75
TraesCS6B01G395700.1 Wheat cytosol 39.12 27.46
TraesCS5A01G379000.1 Wheat nucleus, unclear 36.32 26.88
KRH07345 Soybean cytosol, plastid 40.0 26.48
KRH66214 Soybean cytosol 39.82 26.21
KRG89883 Soybean cytosol, plastid 38.42 25.49
KRH69027 Soybean plastid 40.0 25.31
KRG97300 Soybean plastid 39.65 25.14
KRH06197 Soybean nucleus 40.53 25.05
KRH18682 Soybean cytosol, mitochondrion 40.0 25.03
KRH47615 Soybean nucleus 40.7 25.03
KRG89889 Soybean cytosol, plastid 37.54 24.88
KRH29669 Soybean plastid 39.3 24.86
KRH29668 Soybean nucleus 39.3 24.72
KRH24671 Soybean cytosol, plastid 39.47 24.62
KRG89888 Soybean nucleus 38.95 24.58
KRH17965 Soybean plastid 39.3 24.4
KRH42646 Soybean plastid 38.95 24.1
TraesCS4A01G359800.1 Wheat cytosol 22.28 23.92
KRH50048 Soybean cytosol 35.09 21.98
KRH35534 Soybean cytosol 17.19 21.88
KRH21441 Soybean cytosol 34.91 21.87
KRH10882 Soybean cytosol 13.16 17.28
HORVU5Hr1G054200.1 Barley cytosol, mitochondrion 12.46 14.55
KRH13357 Soybean endoplasmic reticulum 4.04 9.5
KRH57987 Soybean cytosol 1.93 4.26
GSMUA_Achr6P25100_001 Banana cytosol 51.58 2.45
KRH16725 Soybean cytosol 0.88 2.16
KRH62403 Soybean cytosol, endoplasmic reticulum 0.53 1.32
KRH62399 Soybean cytosol, endoplasmic reticulum 0.53 1.27
TraesCS4A01G275800.1 Wheat cytosol 0.53 1.26
TraesCS6D01G122000.1 Wheat cytosol 0.53 0.97
Protein Annotations
Gene3D:1.20.245.10Gene3D:2.60.60.20Gene3D:3.10.450.60Gene3D:4.10.372.10Gene3D:4.10.375.10MapMan:50.1.12
EMBL:ACUP02004133EnsemblPlantsGene:GLYMA_07G006700GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016491GO:GO:0016702GO:GO:0031408GO:GO:0046872GO:GO:0051213GO:GO:0055114
InterPro:IPR001024InterPro:IPR013819InterPro:IPR027433UniProt:K7KYV6EnsemblPlants:KRH47064ProteinID:KRH47064
ProteinID:KRH47064.1InterPro:LipOaseInterPro:LipOase_CInterPro:LipOase_CSInterPro:LipOase_C_sfInterPro:LipOase_Fe_BS
InterPro:LipOase_plantInterPro:Lipoxygenase_dom_3PFAM:PF00305PFAM:PF01477InterPro:PLAT/LH2_domInterPro:PLAT/LH2_dom_sf
PRINTS:PR00087PRINTS:PR00468ScanProsite:PS00081ScanProsite:PS00711PFscan:PS50095PFscan:PS51393
PANTHER:PTHR11771PANTHER:PTHR11771:SF48SMART:SM00308SUPFAM:SSF48484SUPFAM:SSF49723UniParc:UPI000295B8B5
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:+:491733..496064
Molecular Weight (calculated)
63932.1 Da
IEP (calculated)
6.317
GRAVY (calculated)
-0.321
Length
570 amino acids
Sequence
(BLAST)
001: MLGLFDKSHK IKGTVVLMPK NVLDVNELNS VRSGGVGGVV SGLFGAVADV TGQVVDTATA ILSRNVSFKL ISATSTDAKG NGKVGKETYL EKHLPTLPTL
101: GDRRDAYGIH FEWDANFGIP GAIYIRNYTY DEFFLVSVTL EDIPNQGTIH FVCNSWVYNF KDYDKKDRIF FANKTYLPSA TPGPLVKYRE EELEILRGNG
201: TGERKEHERI YDYDVYNDLG NPDKDVKLAR PVLGGSSTYP YPRRVRTGRK ATKKDPKSER PASELYMPRD EKFGHLKSSD FLTYGIKSLS QTLLPSLENI
301: FDSDLTWNEF DSFEEVRDLY EGGIKVPTDV LSDISPIPVF KEIFRSDGES VLQFPPPHVV QVSKSAWMTD DEFAREMIAG VNPNVIRLLK EIPPQSKLDP
401: TLYGDQSSTI SKEHLEINMG GVTVEEALNG QRLFILDYHD AFMPYLTRIN ALPTAKAYAT RTILFLKDDG TLKPLAIELS KPHPSGDNLG AESKVVLPAD
501: QGVESTIWLL AKAHVIVNDS GYHQLMSHWL NTHAVTEPFI IATNRRFSVL HPINKLLYPH SRDTIQIIWT
Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)
001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
Arabidopsis Description
LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.