CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35534	Soybean	cytosol	50.23	96.21
KRG88464	Soybean	cytosol	46.15	86.84
PGSC0003DMT400081370	Potato	cytosol	71.21	69.67
Solyc09g075860.2.1	Tomato	cytosol, nucleus	70.51	68.99
Bra039948.1-P	Field mustard	cytosol	68.76	66.52
CDY38326	Canola	cytosol	68.41	66.18
AT3G22400.1	Thale cress	cytosol	68.18	66.03
VIT_05s0020g03170.t01	Wine grape	cytosol	67.25	65.87
CDY46325	Canola	cytosol	67.48	65.65
Bra023829.1-P	Field mustard	cytosol	68.18	64.78
GSMUA_Achr1P22970_001	Banana	cytosol	63.64	64.54
KRH68548	Soybean	cytosol	64.45	64.45
Solyc09g075870.1.1	Tomato	cytosol	63.99	64.29
CDY64191	Canola	cytosol	67.95	64.28
KRH33939	Soybean	cytosol, endoplasmic reticulum	64.45	63.93
TraesCS4A01G275800.1	Wheat	cytosol	17.6	63.18
TraesCS6D01G122000.1	Wheat	cytosol	22.49	62.26
GSMUA_AchrUn_...	Banana	cytosol	56.53	61.86
GSMUA_AchrUn_...	Banana	cytosol	61.54	61.75
GSMUA_Achr1P24370_001	Banana	cytosol	60.84	61.63
TraesCS4A01G359800.1	Wheat	cytosol	36.95	59.7
KRH10050	Soybean	endoplasmic reticulum	58.62	58.69
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	59.79	58.49
TraesCS5A01G378800.2	Wheat	cytosol	53.03	58.48
GSMUA_Achr6P25110_001	Banana	cytosol	53.85	58.19
EER93611	Sorghum	cytosol	59.91	57.88
KRH44090	Soybean	endoplasmic reticulum	57.81	57.67
Zm00001d033623_P003	Maize	cytosol	58.28	57.67
GSMUA_Achr6P25090_001	Banana	cytosol	56.18	57.52
EER93612	Sorghum	cytosol	58.04	57.51
KRH44093	Soybean	endoplasmic reticulum	56.41	57.21
TraesCS4B01G037800.1	Wheat	cytosol	58.51	57.18
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	58.97	57.05
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	58.28	56.95
TraesCS4A01G275900.1	Wheat	cytosol, unclear	58.28	56.95
KRH23265	Soybean	endoplasmic reticulum, nucleus	57.46	56.93
TraesCS5B01G382400.1	Wheat	cytosol, golgi	56.64	56.78
TraesCS4D01G035100.1	Wheat	cytosol	58.04	56.72
Zm00001d033624_P001	Maize	cytosol	58.62	56.71
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	56.88	56.68
KRH44097	Soybean	cytosol, endoplasmic reticulum	56.99	56.34
KRH16725	Soybean	cytosol	15.15	56.28
KRH44095	Soybean	endoplasmic reticulum	56.76	56.24
TraesCS4B01G037700.3	Wheat	cytosol, golgi	56.41	56.21
Os03t0738600-01	Rice	plasma membrane, plastid	56.88	56.09
KRH23266	Soybean	cytosol	53.96	56.05
Os03t0699700-01	Rice	cytosol, plastid	56.29	55.97
TraesCS4D01G035200.1	Wheat	cytosol	53.96	55.85
KXG37783	Sorghum	cytosol	57.93	55.66
KRH47522	Soybean	endoplasmic reticulum, nucleus	56.06	55.61
TraesCS6B01G160400.1	Wheat	mitochondrion	56.53	55.56
KRH10051	Soybean	endoplasmic reticulum, nucleus	55.36	55.49
TraesCS5B01G382300.1	Wheat	cytosol, unclear	55.83	55.44
GSMUA_Achr9P19250_001	Banana	plasma membrane	61.42	55.42
HORVU5Hr1G093770.1	Barley	cytosol	55.71	55.39
TraesCS6A01G132200.1	Wheat	mitochondrion	56.29	55.33
TraesCS6A01G132500.1	Wheat	mitochondrion	56.29	55.33
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	55.71	55.32
TraesCS5A01G378700.1	Wheat	cytosol	55.71	55.32
TraesCS3B01G602500.1	Wheat	cytosol	56.76	55.28
TraesCS5B01G382600.1	Wheat	cytosol	55.36	55.17
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	55.48	55.09
KRH62399	Soybean	cytosol, endoplasmic reticulum	15.15	55.08
KRH47066	Soybean	endoplasmic reticulum, nucleus	55.13	55.06
KRH23268	Soybean	endoplasmic reticulum	54.66	54.98
KRH47067	Soybean	endoplasmic reticulum	55.24	54.86
TraesCS5A01G378900.1	Wheat	cytosol	55.24	54.86
Os03t0700400-00	Rice	cytosol, plasma membrane	8.04	54.76
EES04025	Sorghum	cytosol	55.36	54.72
KRH10053	Soybean	endoplasmic reticulum	54.31	54.63
KRH47525	Soybean	endoplasmic reticulum	55.24	54.61
TraesCS3B01G605700.1	Wheat	cytosol	56.29	54.58
KRH44094	Soybean	endoplasmic reticulum	55.13	54.56
EES04028	Sorghum	cytosol	54.9	53.95
KRH23269	Soybean	endoplasmic reticulum	51.52	53.77
TraesCS5A01G379000.1	Wheat	nucleus, unclear	48.25	53.77
Zm00001d042541_P002	Maize	cytosol	55.13	53.51
KRH57987	Soybean	cytosol	16.08	53.49
TraesCS5D01G388800.1	Wheat	cytosol	55.59	53.18
KRH47069	Soybean	endoplasmic reticulum	28.09	52.97
KRH62403	Soybean	cytosol, endoplasmic reticulum	13.99	52.86
Zm00001d042540_P008	Maize	cytosol	54.9	52.8
TraesCS5D01G513100.1	Wheat	cytosol	53.03	52.42
KRH47064	Soybean	endoplasmic reticulum	34.27	51.58
Os11t0575600-01	Rice	mitochondrion	51.86	51.27
HORVU5Hr1G117110.1	Barley	cytosol	52.8	51.07
GSMUA_Achr6P25080_001	Banana	cytosol	46.04	50.97
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	28.79	50.61
KRH44092	Soybean	nucleus	50.35	50.41
TraesCS6B01G395700.1	Wheat	cytosol	46.74	49.38
TraesCS6D01G121900.1	Wheat	mitochondrion	24.94	47.87
KRH13357	Soybean	endoplasmic reticulum	13.05	46.28
KRH07345	Soybean	cytosol, plastid	43.01	42.86
KRH66214	Soybean	cytosol	43.01	42.61
KRG89889	Soybean	cytosol, plastid	42.42	42.33
KRG89883	Soybean	cytosol, plastid	41.96	41.91
KRH29669	Soybean	plastid	43.12	41.07
KRH29668	Soybean	nucleus	42.77	40.51
KRG89888	Soybean	nucleus	42.54	40.42
KRH17965	Soybean	plastid	43.01	40.2
KRH24671	Soybean	cytosol, plastid	42.66	40.04
KRH47615	Soybean	nucleus	43.12	39.91
KRH06197	Soybean	nucleus	42.77	39.8
KRH42646	Soybean	plastid	42.42	39.52
KRH18682	Soybean	cytosol, mitochondrion	41.96	39.52
KRH69027	Soybean	plastid	41.26	39.29
KRG97300	Soybean	plastid	40.79	38.93
KRH10882	Soybean	cytosol	19.58	38.71
KRH21441	Soybean	cytosol	40.79	38.46
KRH30640	Soybean	cytosol	7.93	36.36
KRH50048	Soybean	cytosol	37.88	35.71
GSMUA_Achr6P25100_001	Banana	cytosol	45.34	3.24

Protein Annotations

Gene3D:1.20.245.10	EntrezGene:100800451	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10
MapMan:50.1.12	EMBL:ACUP02012673	EnsemblPlantsGene:GLYMA_20G144600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408	GO:GO:0046872	GO:GO:0051213
GO:GO:0055114	UniProt:I1NGD0	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433	EnsemblPlants:KRG91271
ProteinID:KRG91271	ProteinID:KRG91271.1	ProteinID:KRG91272.1	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS
InterPro:LipOase_C_sf	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom
InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	PFscan:PS50095	PFscan:PS51393
PANTHER:PTHR11771	PANTHER:PTHR11771:SF53	SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723	UniParc:UPI000233DDB2
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:38313134..38321218

Molecular Weight (calculated)

97944.8 Da

IEP (calculated)

6.682

GRAVY (calculated)

-0.363

Length

858 amino acids

Sequence
(BLAST)

001: MEVNNQIVER SKRVKGRVVL MKKGVLDFHD IKANVLDRVH ELLGKGVSLQ LISATTPDPA KGLLRGKVAN LERWVSTITS LTSTTDTEFS VTFEWDESMG
101: VPGAFIIRNN HHSQFYLKTL TIEDIPGHDG PVNFVCNSWV YPAHRYAHDR VFFANKAYLP CHTPEPLRKF REQELKTLCG KGFGKLNEWD RVYDYAYYND
201: LGLPDDGPDY ARPVLGGSQF PYPRRGRTSR PHCKTDPKTE SRLHLLNLNV YVPRDEQFGH VKFSDFLAYS LKSVAQVLLP EIKSLCDKTI NEFDTFQDVL
301: DIYEGSIKLP SGPLTSKLRK LVPYELLREL IRNDGERFLK FPVPDVIKVS KTAWRTDEEF AREMLAGVNP VIIRRLQEFP PASKLDPSVY GDQTSSIRAT
401: HIENSLDGLT IDEAIQNMRL FILDHHDSLM PYISRINSTN TKTYASRTLL FLQDDGTLKP LAIELSLPHP QGEQHGAVSK VFTPAQEGVS ASVWQLAKAY
501: AAVNDSGYHQ LVSHWLYTHA VIEPFIIATN RQLSILHPIH KLLKPHFRDT MHINALARHT LINAGGVLEI TVFPGKFALE MSSVIYKSWV FTEQALPADL
601: LKRGMAIPDS SSRHGLRLVI EDYPFAVDGI EIWDAIETWV TEYCNFYYTS NDMVEEDSEL QSWWKEVRNE GHGDLKDRHW WPDMKTKEEL IHSCTIIIWL
701: ASAFHAAVNF GQYPFAGYLP NRPTVSRRFM PEQGTPEYEE LKSDPELAFL KTITAQFQTL VGVSLIEVLS RHSTEEVYLG QCENPEWTLD AEPLAAFERF
801: RQKLLEIENN IMERNKDKRF KNRNGPVKMP YTLLYPNTSD YSREGGLTGK GIPNSISI

Best Arabidopsis Sequence Match ( AT3G22400.1 )
(BLAST)

001: MIHTDIAEIL CVKPKTTKKT KTMEEDVKKT TTMKIEGEVV VMKKNLLDFK DVMASLLDRV NELLGRRVSL HLISSHQPDP ANEKRGRLGK AAHLEKWVTK
101: IKTSVTAEET AFGVTFDWDE SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS NKAYLPSETP ELIKELREEE
201: LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK
301: SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV
401: ISRLQEFPPK SCLDSAKYGN QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL QADGTLKPLA IELSLPHAQG
501: ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV
601: FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH
701: GDKRHESWWP SMQTRDDLIE TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT ITPQLQTLLG ISIIEILSMH
801: STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI

Arabidopsis Description

LOX5Linoleate 9S-lipoxygenase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.