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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 6
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 endoplasmic reticulum: 23041469
endoplasmic reticulum: 27224218
nucleus: 27291164
endoplasmic reticulum: 28499913
mitochondrion: 28499913
nucleus: 28499913
msms PMID: 23041469 doi
S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27291164 doi
X Yin, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH16725 Soybean cytosol 20.42 75.76
KRH44097 Soybean cytosol, endoplasmic reticulum 75.73 74.77
KRH10051 Soybean endoplasmic reticulum, nucleus 74.68 74.77
KRH23265 Soybean endoplasmic reticulum, nucleus 75.5 74.71
KRH10053 Soybean endoplasmic reticulum 73.98 74.33
KRH44090 Soybean endoplasmic reticulum 74.45 74.19
KRH47069 Soybean endoplasmic reticulum 39.32 74.07
KRH23268 Soybean endoplasmic reticulum 73.51 73.86
KRH44095 Soybean endoplasmic reticulum 74.45 73.67
KRH23269 Soybean endoplasmic reticulum 69.78 72.75
KRH23266 Soybean cytosol 69.54 72.16
KRH62399 Soybean cytosol, endoplasmic reticulum 19.84 72.03
KRH44093 Soybean endoplasmic reticulum 70.95 71.87
KRH47522 Soybean endoplasmic reticulum, nucleus 72.46 71.79
KRH47066 Soybean endoplasmic reticulum, nucleus 70.83 70.66
KRH47067 Soybean endoplasmic reticulum 71.18 70.6
KRH44094 Soybean endoplasmic reticulum 71.06 70.24
KRH62403 Soybean cytosol, endoplasmic reticulum 18.44 69.6
KRH57987 Soybean cytosol 20.54 68.22
KRH47525 Soybean endoplasmic reticulum 68.84 67.97
KRH47064 Soybean endoplasmic reticulum 44.92 67.54
KRH35534 Soybean cytosol 33.96 64.96
KRH68548 Soybean cytosol 64.99 64.92
KRH13357 Soybean endoplasmic reticulum 17.85 63.22
KRH33939 Soybean cytosol, endoplasmic reticulum 61.96 61.39
TraesCS4A01G275800.1 Wheat cytosol 16.92 60.67
KRH44092 Soybean nucleus 59.74 59.74
GSMUA_Achr1P22970_001 Banana cytosol 58.93 59.69
Os03t0700400-00 Rice cytosol, plasma membrane 8.75 59.52
GSMUA_AchrUn_... Banana cytosol 54.03 59.06
GSMUA_AchrUn_... Banana cytosol 58.69 58.83
TraesCS4A01G359800.1 Wheat cytosol 36.41 58.76
KRG91271 Soybean cytosol 58.69 58.62
GSMUA_Achr1P24370_001 Banana cytosol 56.83 57.5
GSMUA_Achr6P25110_001 Banana cytosol 52.04 56.17
TraesCS6D01G122000.1 Wheat cytosol 20.3 56.13
Os03t0700700-01 Rice cytosol, plasma membrane, plastid 57.18 55.87
GSMUA_Achr6P25090_001 Banana cytosol 54.38 55.61
Zm00001d033623_P003 Maize cytosol 56.24 55.59
TraesCS5A01G378800.2 Wheat cytosol 50.41 55.53
Zm00001d013493_P001 Maize cytosol, extracellular, mitochondrion 57.06 55.13
TraesCS5B01G382600.1 Wheat cytosol 55.31 55.05
EER93611 Sorghum cytosol 56.94 54.95
EES04025 Sorghum cytosol 55.66 54.95
Os03t0699700-01 Rice cytosol, plastid 55.31 54.92
EER93612 Sorghum cytosol 55.31 54.73
TraesCS5B01G382400.1 Wheat cytosol, golgi 54.49 54.56
HORVU5Hr1G093770.1 Barley cytosol 54.84 54.46
TraesCS4A01G275900.1 Wheat cytosol, unclear 55.66 54.33
TraesCS4B01G037800.1 Wheat cytosol 55.66 54.33
HORVU5Hr1G093700.3 Barley cytosol, plasma membrane 54.73 54.28
TraesCS5A01G378900.1 Wheat cytosol 54.73 54.28
TraesCS4D01G035100.1 Wheat cytosol 55.54 54.21
TraesCS4D01G035200.1 Wheat cytosol 52.39 54.16
TraesCS4B01G037900.1 Wheat cytosol, golgi, nucleus, plastid, unclear 54.38 54.12
HORVU4Hr1G005920.1 Barley cytosol, plasma membrane 55.43 54.1
TraesCS5A01G378700.1 Wheat cytosol 54.26 53.82
TraesCS5B01G382300.1 Wheat cytosol, unclear 54.26 53.82
Os03t0738600-01 Rice plasma membrane, plastid 54.49 53.68
Zm00001d033624_P001 Maize cytosol 55.54 53.66
TraesCS4B01G037700.3 Wheat cytosol, golgi 53.91 53.66
KXG37783 Sorghum cytosol 55.89 53.64
TraesCS5D01G388700.1 Wheat cytosol, golgi, unclear 54.03 53.59
Zm00001d042541_P002 Maize cytosol 55.19 53.51
TraesCS5A01G379000.1 Wheat nucleus, unclear 47.49 52.86
EES04028 Sorghum cytosol 53.79 52.81
GSMUA_Achr9P19250_001 Banana plasma membrane 58.58 52.79
TraesCS5D01G388800.1 Wheat cytosol 54.96 52.51
TraesCS6A01G132200.1 Wheat mitochondrion 52.74 51.78
TraesCS6A01G132500.1 Wheat mitochondrion 52.74 51.78
TraesCS6B01G160400.1 Wheat mitochondrion 52.74 51.78
Zm00001d042540_P008 Maize cytosol 53.79 51.68
TraesCS3B01G605700.1 Wheat cytosol 53.21 51.53
TraesCS3B01G602500.1 Wheat cytosol 52.86 51.42
KRG88464 Soybean cytosol 27.19 51.1
TraesCS5D01G513100.1 Wheat cytosol 51.46 50.81
HORVU5Hr1G117110.1 Barley cytosol 52.28 50.51
HORVU5Hr1G054200.1 Barley cytosol, mitochondrion 28.35 49.8
GSMUA_Achr6P25080_001 Banana cytosol 44.46 49.16
Os11t0575600-01 Rice mitochondrion 49.71 49.08
TraesCS6B01G395700.1 Wheat cytosol 44.57 47.04
TraesCS6D01G121900.1 Wheat mitochondrion 24.5 46.98
KRH07345 Soybean cytosol, plastid 43.76 43.55
KRH66214 Soybean cytosol 43.99 43.53
KRH10882 Soybean cytosol 21.24 41.94
KRG89883 Soybean cytosol, plastid 41.77 41.68
KRH69027 Soybean plastid 43.64 41.51
KRH42646 Soybean plastid 44.22 41.15
KRH06197 Soybean nucleus 44.22 41.11
KRH47615 Soybean nucleus 44.46 41.1
KRH29669 Soybean plastid 43.06 40.95
KRG97300 Soybean plastid 42.94 40.93
KRG89889 Soybean cytosol, plastid 40.96 40.81
KRH29668 Soybean nucleus 43.06 40.73
KRH17965 Soybean plastid 43.52 40.63
KRH24671 Soybean cytosol, plastid 42.71 40.04
KRG89888 Soybean nucleus 42.01 39.87
KRH18682 Soybean cytosol, mitochondrion 42.24 39.74
KRH21441 Soybean cytosol 40.37 38.02
KRH50048 Soybean cytosol 40.02 37.69
KRH30640 Soybean cytosol 7.7 35.29
GSMUA_Achr6P25100_001 Banana cytosol 43.29 3.09
Protein Annotations
Gene3D:1.20.245.10Gene3D:2.60.60.20Gene3D:3.10.450.60Gene3D:4.10.372.10Gene3D:4.10.375.10MapMan:50.1.12
EntrezGene:547869ProteinID:ABX60408.1EMBL:ACUP02009117ProteinID:ADG03096.1UniProt:B3TDK6EnsemblPlantsGene:GLYMA_15G026300
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006629GO:GO:0006631GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016491GO:GO:0016702GO:GO:0031408
GO:GO:0046872GO:GO:0051213GO:GO:0055114InterPro:IPR001024InterPro:IPR013819InterPro:IPR027433
EnsemblPlants:KRH10050ProteinID:KRH10050ProteinID:KRH10050.1InterPro:LipOaseInterPro:LipOase_CInterPro:LipOase_CS
InterPro:LipOase_C_sfInterPro:LipOase_Fe_BSInterPro:LipOase_plantInterPro:Lipoxygenase_dom_3PFAM:PF00305PFAM:PF01477
InterPro:PLAT/LH2_domInterPro:PLAT/LH2_dom_sfPRINTS:PR00087PRINTS:PR00468ScanProsite:PS00081ScanProsite:PS00711
PFscan:PS50095PFscan:PS51393PANTHER:PTHR11771PANTHER:PTHR11771:SF48SMART:SM00308SUPFAM:SSF48484
SUPFAM:SSF49723UniParc:UPI000178CA60SEG:seg:::
Description
hypothetical protein
Coordinates
chr15:+:2123754..2128104
Molecular Weight (calculated)
96773.4 Da
IEP (calculated)
6.550
GRAVY (calculated)
-0.346
Length
857 amino acids
Sequence
(BLAST)
001: MLGGLLHRGH KIKGTVVLMR KNVLDVNSVT SVGGIIGQGL DLVGSTLDTL TAFLGRSVSL QLISATKADA NGKGKLGKAT FLEGIITSLP TLGAGQSAFK
101: INFEWDDGSG IPGAFYIKNF MQTEFFLVSL TLEDIPNHGS IHFVCNSWIY NAKLFKSDRI FFANQTYLPS ETPAPLVKYR EEELHNLRGD GTGERKEWER
201: IYDYDVYNDL GDPDKGENHA RPVLGGNDTF PYPRRGRTGR KPTRKDPNSE SRSNDVYLPR DEAFGHLKSS DFLTYGLKSV SQNVLPLLQS AFDLNFTPRE
301: FDSFDEVHGL YSGGIKLPTD IISKISPLPV LKEIFRTDGE QALKFPPPKV IQVSKSAWMT DEEFAREMLA GVNPNLIRCL KDFPPRSKLD SQVYGDHTSQ
401: ITKEHLEPNL EGLTVDEAIQ NKRLFLLDHH DPIMPYLRRI NATSTKAYAT RTILFLKNDG TLRPLAIELS LPHPQGDQSG AFSQVFLPAD EGVESSIWLL
501: AKAYVVVNDS CYHQLVSHWL NTHAVVEPFI IATNRHLSVV HPIYKLLHPH YRDTMNINGL ARLSLVNDGG VIEQTFLWGR YSVEMSAVVY KDWVFTDQAL
601: PADLIKRGMA IEDPSCPHGI RLVIEDYPYA VDGLEIWDAI KTWVHEYVFL YYKSDDTLRE DPELQACWKE LVEVGHGDKK NEPWWPKMQT REELVEACAI
701: IIWTASALHA AVNFGQYPYG GLILNRPTLS RRFMPEKGSA EYEELRKNPQ KAYLKTITPK FQTLIDLSVI EILSRHASDE VYLGERDNPN WTSDTRALEA
801: FKRFGNKLAQ IENKLSERNN DEKLRNRCGP VQMPYTLLLP SSKEGLTFRG IPNSISI
Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)
001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
Arabidopsis Description
LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.