CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62403	Soybean	cytosol, endoplasmic reticulum	78.81	81.94
KRH16725	Soybean	cytosol	78.39	80.09
KRH57987	Soybean	cytosol	83.05	75.97
KRH13357	Soybean	endoplasmic reticulum	57.2	55.79
TraesCS4A01G275800.1	Wheat	cytosol	47.46	46.86
TraesCS6D01G122000.1	Wheat	cytosol	55.08	41.94
KRH35534	Soybean	cytosol	54.66	28.79
TraesCS4A01G359800.1	Wheat	cytosol	58.05	25.8
KRH10053	Soybean	endoplasmic reticulum	93.22	25.79
KRH23268	Soybean	endoplasmic reticulum	91.95	25.44
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	51.69	25.0
KRH10051	Soybean	endoplasmic reticulum, nucleus	87.71	24.18
KRH23269	Soybean	endoplasmic reticulum	75.0	21.53
KRH44097	Soybean	cytosol, endoplasmic reticulum	75.42	20.51
KRH44095	Soybean	endoplasmic reticulum	73.73	20.09
KRH10050	Soybean	endoplasmic reticulum	72.03	19.84
KRH23265	Soybean	endoplasmic reticulum, nucleus	67.37	18.36
KRH44094	Soybean	endoplasmic reticulum	67.37	18.34
KRH23266	Soybean	cytosol	63.98	18.28
TraesCS5A01G379000.1	Wheat	nucleus, unclear	59.32	18.18
KRH44090	Soybean	endoplasmic reticulum	66.1	18.14
KRH47067	Soybean	endoplasmic reticulum	66.1	18.06
KRH47069	Soybean	endoplasmic reticulum	34.32	17.8
KRH47525	Soybean	endoplasmic reticulum	64.83	17.63
KRH44093	Soybean	endoplasmic reticulum	63.14	17.61
KRH47066	Soybean	endoplasmic reticulum, nucleus	63.98	17.58
TraesCS5A01G378800.2	Wheat	cytosol	57.63	17.48
KRH47522	Soybean	endoplasmic reticulum, nucleus	63.98	17.46
KRH33939	Soybean	cytosol, endoplasmic reticulum	62.71	17.11
KRH68548	Soybean	cytosol	61.86	17.02
KRH44092	Soybean	nucleus	61.44	16.92
GSMUA_AchrUn_...	Banana	cytosol	60.59	16.73
Zm00001d033623_P003	Maize	cytosol	61.02	16.61
Os03t0699700-01	Rice	cytosol, plastid	60.59	16.57
TraesCS5B01G382600.1	Wheat	cytosol	60.17	16.49
EER93612	Sorghum	cytosol	60.17	16.4
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	59.75	16.32
GSMUA_Achr1P24370_001	Banana	cytosol	58.47	16.29
TraesCS4D01G035200.1	Wheat	cytosol	57.2	16.28
EES04025	Sorghum	cytosol	59.75	16.24
TraesCS5A01G378900.1	Wheat	cytosol	59.32	16.2
KRH10882	Soybean	cytosol	29.66	16.13
HORVU5Hr1G093770.1	Barley	cytosol	58.9	16.11
TraesCS5B01G382300.1	Wheat	cytosol, unclear	58.9	16.09
TraesCS5B01G382400.1	Wheat	cytosol, golgi	58.05	16.0
TraesCS5A01G378700.1	Wheat	cytosol	58.47	15.97
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	59.32	15.96
GSMUA_AchrUn_...	Banana	cytosol	52.97	15.94
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	59.75	15.9
Os03t0738600-01	Rice	plasma membrane, plastid	58.47	15.86
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	58.05	15.86
TraesCS4A01G275900.1	Wheat	cytosol, unclear	58.9	15.83
TraesCS4D01G035100.1	Wheat	cytosol	58.9	15.83
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	57.63	15.8
TraesCS5D01G513100.1	Wheat	cytosol	58.05	15.78
EER93611	Sorghum	cytosol	59.32	15.77
Zm00001d042541_P002	Maize	cytosol	58.9	15.72
TraesCS5D01G388800.1	Wheat	cytosol	59.75	15.72
TraesCS4B01G037800.1	Wheat	cytosol	58.47	15.72
TraesCS4B01G037700.3	Wheat	cytosol, golgi	57.2	15.68
Zm00001d033624_P001	Maize	cytosol	58.9	15.67
EES04028	Sorghum	cytosol	57.63	15.58
Zm00001d042540_P008	Maize	cytosol	58.47	15.47
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	57.2	15.38
GSMUA_Achr6P25110_001	Banana	cytosol	51.69	15.37
KXG37783	Sorghum	cytosol	58.05	15.34
KRG91271	Soybean	cytosol	55.08	15.15
GSMUA_Achr1P22970_001	Banana	cytosol	54.24	15.13
TraesCS6A01G132200.1	Wheat	mitochondrion	55.93	15.12
TraesCS6A01G132500.1	Wheat	mitochondrion	55.93	15.12
TraesCS6B01G160400.1	Wheat	mitochondrion	55.93	15.12
HORVU5Hr1G117110.1	Barley	cytosol	56.36	14.99
TraesCS3B01G605700.1	Wheat	cytosol	55.51	14.8
TraesCS3B01G602500.1	Wheat	cytosol	55.08	14.76
GSMUA_Achr6P25090_001	Banana	cytosol	50.42	14.2
GSMUA_Achr9P19250_001	Banana	plasma membrane	57.2	14.2
Os11t0575600-01	Rice	mitochondrion	50.85	13.82
TraesCS6B01G395700.1	Wheat	cytosol	46.61	13.55
KRH66214	Soybean	cytosol	47.03	12.82
KRH07345	Soybean	cytosol, plastid	46.19	12.66
KRH69027	Soybean	plastid	44.92	11.76
KRG89883	Soybean	cytosol, plastid	42.37	11.64
KRH42646	Soybean	plastid	45.34	11.62
KRG97300	Soybean	plastid	44.07	11.57
KRH29669	Soybean	plastid	43.22	11.32
KRH17965	Soybean	plastid	43.64	11.22
KRG89889	Soybean	cytosol, plastid	40.68	11.16
KRH29668	Soybean	nucleus	41.95	10.93
KRH21441	Soybean	cytosol	41.95	10.88
KRH18682	Soybean	cytosol, mitochondrion	41.95	10.87
KRH06197	Soybean	nucleus	42.37	10.85
KRH47615	Soybean	nucleus	42.37	10.79
KRG89888	Soybean	nucleus	40.68	10.63
KRH24671	Soybean	cytosol, plastid	41.1	10.61
KRH50048	Soybean	cytosol	39.83	10.33
GSMUA_Achr6P25080_001	Banana	cytosol	14.83	4.52
KRH47064	Soybean	endoplasmic reticulum	1.27	0.53
GSMUA_Achr6P25100_001	Banana	cytosol	15.25	0.3
KRG88464	Soybean	cytosol	0.42	0.22
KRH30640	Soybean	cytosol	0.0	0.0
Os03t0700400-00	Rice	cytosol, plasma membrane	0.0	0.0
TraesCS6D01G121900.1	Wheat	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.20.245.10	MapMan:50.1.12	UniProt:A0A0R0KHI0	EMBL:ACUP02002253	EnsemblPlantsGene:GLYMA_04G105500	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016702
GO:GO:0046872	GO:GO:0055114	InterPro:IPR013819	EnsemblPlants:KRH62399	ProteinID:KRH62399	ProteinID:KRH62399.1
InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_C_sf	PFAM:PF00305	PFscan:PS51393	PANTHER:PTHR11771
PANTHER:PTHR11771:SF48	SUPFAM:SSF48484	UniParc:UPI0006EDBCE1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:10440510..10445278

Molecular Weight (calculated)

27256.5 Da

IEP (calculated)

6.641

GRAVY (calculated)

-0.488

Length

236 amino acids

Sequence
(BLAST)

001: MHYLKQGVVV KDPSAPHGVR LLIKDYPYAS DGLEIWDAIK SWVEEYVSFY YKLDEELQKD PELQAWWKEL VEVGHGDLKD KPWWQKMQTR EELVEAYATL
101: IWIASALHVV VNFGQYPPYG GLILNRPTIS RRFMPEKGSP KYDALAKNHE KEFLKTITGK KETLIDLTII EILSRHASDE FYLGQRDGGD YWTSNAGPLK
201: TFKRNHYGPA KMPYTLLYPS SEEGLTFRGI PNSISI

Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)

001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI

Arabidopsis Description

LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.