CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033623_P003	Maize	cytosol	94.23	94.12
Os03t0700400-00	Rice	cytosol, plasma membrane	12.59	86.51
TraesCS4A01G275800.1	Wheat	cytosol	23.79	86.19
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	83.49	83.97
TraesCS4B01G037700.3	Wheat	cytosol, golgi	82.91	83.39
TraesCS4D01G035200.1	Wheat	cytosol	79.21	82.75
EES04025	Sorghum	cytosol	74.6	74.42
EES04028	Sorghum	cytosol	73.56	72.97
EER93611	Sorghum	cytosol	67.67	65.99
KXG37783	Sorghum	cytosol	66.51	64.5
KRH35534	Soybean	cytosol	32.91	63.62
CDY70916	Canola	cytosol	36.95	63.49
GSMUA_Achr1P22970_001	Banana	cytosol	61.78	63.24
PGSC0003DMT400063654	Potato	cytosol	35.22	62.12
KRH16725	Soybean	cytosol	16.28	61.04
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	60.74	61.02
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	60.62	60.98
VIT_14s0128g00780.t01	Wine grape	cytosol	60.28	60.77
PGSC0003DMT400028158	Potato	cytosol	60.39	60.67
KRH62399	Soybean	cytosol, endoplasmic reticulum	16.4	60.17
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	59.58	60.0
PGSC0003DMT400054145	Potato	cytosol	59.35	59.91
VIT_14s0128g00790.t01	Wine grape	cytosol	59.82	59.61
Bra021322.1-P	Field mustard	cytosol	58.66	59.28
PGSC0003DMT400063446	Potato	cytosol	54.85	59.08
KRH62403	Soybean	cytosol, endoplasmic reticulum	15.47	59.03
VIT_05s0020g03170.t01	Wine grape	cytosol	59.35	58.68
PGSC0003DMT400081370	Potato	cytosol	59.35	58.61
Solyc09g075860.2.1	Tomato	cytosol, nucleus	59.24	58.49
KRH68548	Soybean	cytosol	57.62	58.16
AT1G55020.1	Thale cress	cytosol	57.62	58.09
KRG91271	Soybean	cytosol	57.51	58.04
Solyc01g099200.2.1	Tomato	cytosol, plastid	56.35	58.03
Solyc01g099180.2.1	Tomato	cytosol	57.16	57.96
KRH57987	Soybean	cytosol	17.21	57.75
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	57.16	57.69
PGSC0003DMT400063469	Potato	cytosol	56.12	57.65
PGSC0003DMT400063477	Potato	cytosol	56.47	57.13
KRH33939	Soybean	cytosol, endoplasmic reticulum	57.04	57.11
PGSC0003DMT400063461	Potato	cytosol	45.73	57.06
Solyc01g099210.2.1	Tomato	cytosol	56.47	56.66
Solyc09g075870.1.1	Tomato	cytosol	55.43	56.21
PGSC0003DMT400063452	Potato	cytosol	51.27	55.57
AT3G22400.1	Thale cress	cytosol	56.7	55.42
KRH47066	Soybean	endoplasmic reticulum, nucleus	54.97	55.41
KRH44093	Soybean	endoplasmic reticulum	54.04	55.32
KRH10050	Soybean	endoplasmic reticulum	54.73	55.31
KRH23266	Soybean	cytosol	52.66	55.21
Bra039948.1-P	Field mustard	cytosol	56.47	55.13
CDY38326	Canola	cytosol	56.47	55.13
KRH44090	Soybean	endoplasmic reticulum	54.73	55.12
CDY46325	Canola	cytosol	56.12	55.1
KRH23265	Soybean	endoplasmic reticulum, nucleus	55.08	55.08
KRH10051	Soybean	endoplasmic reticulum, nucleus	54.16	54.79
KRH47067	Soybean	endoplasmic reticulum	54.5	54.63
KRH44095	Soybean	endoplasmic reticulum	54.39	54.39
KRH47522	Soybean	endoplasmic reticulum, nucleus	54.27	54.34
KRH10053	Soybean	endoplasmic reticulum	53.35	54.16
VIT_06s0004g01580.t01	Wine grape	cytosol	20.9	54.03
Bra023829.1-P	Field mustard	cytosol	56.24	53.93
KRH44097	Soybean	cytosol, endoplasmic reticulum	54.04	53.92
CDY64191	Canola	cytosol	56.12	53.58
KRH23268	Soybean	endoplasmic reticulum	52.77	53.58
KRH23269	Soybean	endoplasmic reticulum	50.81	53.53
KRH44094	Soybean	endoplasmic reticulum	53.46	53.4
KRH47525	Soybean	endoplasmic reticulum	53.46	53.34
KRH13357	Soybean	endoplasmic reticulum	14.9	53.31
KRH47069	Soybean	endoplasmic reticulum	27.14	51.65
KRG88464	Soybean	cytosol	26.44	50.22
KRH44092	Soybean	nucleus	48.96	49.47
KRH47064	Soybean	endoplasmic reticulum	32.45	49.3
KXG24148	Sorghum	cytosol	45.5	45.97
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	25.87	43.84
Solyc01g099150.2.1	Tomato	nucleus	43.07	43.27
KXG23911	Sorghum	cytosol, plastid	27.14	43.12
CDY43490	Canola	cytosol, plasma membrane	58.55	42.14
OQU80925	Sorghum	cytosol	41.8	41.85
EES10882	Sorghum	plastid	42.73	40.04
EER95400	Sorghum	mitochondrion	42.38	39.72
KXG27309	Sorghum	mitochondrion, plastid	41.45	39.58
KXG29701	Sorghum	plastid	41.34	39.04

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
EntrezGene:8064218	UniProt:C5WNU9	EnsemblPlants:EER93612	ProteinID:EER93612	ProteinID:EER93612.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408
GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433
InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS	InterPro:LipOase_plant
InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087
PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771
PANTHER:PTHR11771:SF49	SMART:SM00308	EnsemblPlantsGene:SORBI_3001G125900	SUPFAM:SSF48484	SUPFAM:SSF49723	unigene:Sbi.17242
UniParc:UPI0001A82915	RefSeq:XP_002466614.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:9916344..9921119

Molecular Weight (calculated)

96610.0 Da

IEP (calculated)

6.415

GRAVY (calculated)

-0.298

Length

866 amino acids

Sequence
(BLAST)

001: MLLGGIIDGL TGANKHARLK GTVVLMRKNV LDLNDLGATV IDGISEFLGK GVTCQLISST LVDANNGNRG RVGAEANLEQ WLTSLPSVTT GESKFGVTFD
101: WEVAKLGVPG AVIVKNNHTS EFFLKTITLD DVPGRGTVTF VANSWVYPVG KYRYSRVFFS NDTYLPSQMP PALKPYRDDE LRNLRGDDQQ GPYQEHDRVY
201: RYDVYNDLGE PDGGNPRPIL GGSADHPYPR RCRTGRKPTK TDPNSESRLS SLLEKIYVPR DERFGHLKMS DFLGHAIKAI AQGIIPAVRT YVDTSPKEFD
301: SFQDIINLYE GGIKLPKIQA LEDMRKLFPL QLVKDLLPAG GDYLLKLPIP EIIKESKDAW RTDEEFAREV LAGVNPVVIT RLTEFPPKST LDPSKYGDHT
401: STITAEHIEK NLEGLTVQQA LDGNRLYILD HHDRFMPFLI DVNNLEGNFI YATRALFFLR ADGRLAPLAI ELSEPYIDGG LTKAKSKVYT PASAGVEAWV
501: WQLAKAYVAV NDSGWHQLIS HWLNTHAVME PFVIATNRQL SVTHPVHKLL HPHFRDTMTI NALARQTLIN GGGIFELTVF PGKYALAMSS VVYKDWNFTE
601: QGLPADLVKR GVAVEDPSSP YKVRLLIQDY PYASDGLAIW HAIEQWVGEY LAIYYPDDAA LRGDEELQAW WKEVREVGHG DLKDAAWWPK MQAVSELASA
701: CTTIIWIASA LHAAVNFGQY PYAGYLPNRP TVSRRRMPEP GSKEYEELER YPERGFIHTI TSQIQTIIGI SLIEILSKHS SDEVYLGQRD TPEWTSDAKA
801: KAAFKRFSDA LVAIEGKVVG ENRDPQLKNR NGPAEFPYML LYPNTSDHSG AAAGLTAKGI PNSISI

Best Arabidopsis Sequence Match ( AT3G22400.1 )
(BLAST)

001: MIHTDIAEIL CVKPKTTKKT KTMEEDVKKT TTMKIEGEVV VMKKNLLDFK DVMASLLDRV NELLGRRVSL HLISSHQPDP ANEKRGRLGK AAHLEKWVTK
101: IKTSVTAEET AFGVTFDWDE SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS NKAYLPSETP ELIKELREEE
201: LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK
301: SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV
401: ISRLQEFPPK SCLDSAKYGN QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL QADGTLKPLA IELSLPHAQG
501: ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV
601: FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH
701: GDKRHESWWP SMQTRDDLIE TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT ITPQLQTLLG ISIIEILSMH
801: STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI

Arabidopsis Description

LOX5Linoleate 9S-lipoxygenase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.