Factsheet for Bra021322.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G55020.1	Thale cress	cytosol	92.65	92.43
VIT_14s0128g00780.t01	Wine grape	cytosol	74.21	74.04
VIT_14s0128g00790.t01	Wine grape	cytosol	72.93	71.92
KRH68548	Soybean	cytosol	71.18	71.1
CDY43490	Canola	cytosol, plasma membrane	99.65	70.99
VIT_06s0004g01580.t01	Wine grape	cytosol	27.54	70.45
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	70.13	69.72
PGSC0003DMT400028158	Potato	cytosol	70.01	69.61
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	69.78	69.45
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	68.14	67.91
PGSC0003DMT400063654	Potato	cytosol	38.74	67.62
KRH33939	Soybean	cytosol, endoplasmic reticulum	68.03	67.4
PGSC0003DMT400063446	Potato	cytosol	63.01	67.16
PGSC0003DMT400054145	Potato	cytosol	67.21	67.13
Solyc01g099180.2.1	Tomato	cytosol	65.11	65.34
GSMUA_Achr1P22970_001	Banana	cytosol	64.41	65.25
PGSC0003DMT400063461	Potato	cytosol	52.63	64.99
PGSC0003DMT400063452	Potato	cytosol	60.33	64.71
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	64.41	64.34
PGSC0003DMT400063469	Potato	cytosol	63.24	64.29
Solyc01g099200.2.1	Tomato	cytosol, plastid	63.01	64.21
GSMUA_AchrUn_...	Banana	cytosol	63.01	63.16
PGSC0003DMT400063477	Potato	cytosol	62.43	62.5
Solyc01g099210.2.1	Tomato	cytosol	62.89	62.46
Os03t0700400-00	Rice	cytosol, plasma membrane	9.1	61.9
GSMUA_AchrUn_...	Banana	cytosol	56.36	61.61
Bra039948.1-P	Field mustard	cytosol	63.48	61.33
GSMUA_Achr1P24370_001	Banana	cytosol	60.21	60.92
GSMUA_Achr6P25110_001	Banana	cytosol	56.24	60.71
Bra023829.1-P	Field mustard	cytosol	63.48	60.24
GSMUA_Achr6P25090_001	Banana	cytosol	58.81	60.14
TraesCS4A01G359800.1	Wheat	cytosol	36.99	59.7
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	60.91	59.52
Zm00001d033623_P003	Maize	cytosol	59.39	58.71
EER93611	Sorghum	cytosol	60.79	58.67
EER93612	Sorghum	cytosol	59.28	58.66
TraesCS4A01G275900.1	Wheat	cytosol, unclear	59.98	58.54
TraesCS4B01G037800.1	Wheat	cytosol	59.98	58.54
TraesCS4D01G035100.1	Wheat	cytosol	59.98	58.54
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	59.86	58.43
Zm00001d033624_P001	Maize	cytosol	60.44	58.4
GSMUA_Achr9P19250_001	Banana	plasma membrane	64.64	58.25
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	60.21	58.17
TraesCS4A01G275800.1	Wheat	cytosol	16.22	58.16
TraesCS6D01G122000.1	Wheat	cytosol	21.0	58.06
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	57.76	57.29
TraesCS5B01G382300.1	Wheat	cytosol, unclear	57.76	57.29
TraesCS4B01G037700.3	Wheat	cytosol, golgi	57.53	57.26
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	57.53	57.26
Os03t0699700-01	Rice	cytosol, plastid	57.64	57.24
Os03t0738600-01	Rice	plasma membrane, plastid	57.99	57.13
TraesCS5A01G378700.1	Wheat	cytosol	57.53	57.06
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	57.53	57.06
TraesCS5A01G378800.2	Wheat	cytosol	51.69	56.94
TraesCS4D01G035200.1	Wheat	cytosol	54.96	56.82
EES04025	Sorghum	cytosol	57.18	56.45
HORVU5Hr1G093770.1	Barley	cytosol	56.71	56.32
TraesCS5B01G382400.1	Wheat	cytosol, golgi	56.24	56.31
EES04028	Sorghum	cytosol	57.29	56.24
KXG37783	Sorghum	cytosol	58.58	56.22
TraesCS5B01G382600.1	Wheat	cytosol	55.89	55.63
Zm00001d042541_P002	Maize	cytosol	57.18	55.43
TraesCS3B01G602500.1	Wheat	cytosol	56.94	55.39
TraesCS5A01G378900.1	Wheat	cytosol	55.78	55.32
Zm00001d042540_P008	Maize	cytosol	57.29	55.04
TraesCS6B01G160400.1	Wheat	mitochondrion	55.43	54.41
TraesCS6A01G132500.1	Wheat	mitochondrion	55.43	54.41
TraesCS6A01G132200.1	Wheat	mitochondrion	55.43	54.41
TraesCS3B01G605700.1	Wheat	cytosol	55.89	54.12
GSMUA_Achr6P25080_001	Banana	cytosol	48.89	54.06
TraesCS5D01G388800.1	Wheat	cytosol	56.01	53.51
TraesCS5A01G379000.1	Wheat	nucleus, unclear	48.07	53.51
TraesCS5D01G513100.1	Wheat	cytosol	54.14	53.46
HORVU5Hr1G117110.1	Barley	cytosol	55.08	53.21
Os11t0575600-01	Rice	mitochondrion	52.16	51.5
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	29.17	51.23
TraesCS6B01G395700.1	Wheat	cytosol	47.84	50.49
TraesCS6D01G121900.1	Wheat	mitochondrion	25.44	48.77
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	29.05	48.73
Solyc01g099150.2.1	Tomato	nucleus	48.77	48.49
Bra004059.1-P	Field mustard	plastid	42.01	41.57
Bra004060.1-P	Field mustard	plastid	43.52	41.49
Bra004057.1-P	Field mustard	cytosol	42.82	41.19
Bra016602.1-P	Field mustard	cytosol	43.52	40.59
Bra003526.1-P	Field mustard	plastid	42.59	40.38
Bra030988.1-P	Field mustard	cytosol, mitochondrion, plastid	43.29	40.37
Bra022535.1-P	Field mustard	plastid	37.92	40.07
Bra008037.1-P	Field mustard	plastid	42.71	39.83
Bra004081.1-P	Field mustard	plastid	42.59	39.76
Bra033991.1-P	Field mustard	plastid	42.12	39.54
Bra004058.1-P	Field mustard	plastid	42.82	34.69
GSMUA_Achr6P25100_001	Banana	cytosol	47.61	3.4

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
EnsemblPlantsGene:Bra021322	EnsemblPlants:Bra021322.1	EnsemblPlants:Bra021322.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629
GO:GO:0006633	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009536
GO:GO:0009653	GO:GO:0009719	GO:GO:0009737	GO:GO:0009753	GO:GO:0009791	GO:GO:0009987
GO:GO:0010311	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408	GO:GO:0034440	GO:GO:0046872
GO:GO:0048364	GO:GO:0051213	GO:GO:0055114	GO:GO:1990136	InterPro:IPR001024	InterPro:IPR013819
InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS
InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	UniProt:M4DXS6	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom
InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095
PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF53	SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723
UniParc:UPI0002545076	SEG:seg	:	:	:	:

Description

AT1G55020 (E=0.0) LOX1 | LOX1; lipoxygenase

Coordinates

chrA01:+:26314261..26319505

Molecular Weight (calculated)

97542.6 Da

IEP (calculated)

4.934

GRAVY (calculated)

-0.455

Length

857 amino acids

Sequence
(BLAST)

001: MIGDLVDLLT GGGGNAAKVK GTVVLMKKNV LDFNDFNASF LDRLHEFLGN KVTLRLISSD VTDPENGSNG KLGKAAHLED WITTITSLTA GESAFKVTFD
101: YDQDFGYPGA FLIRNSHFSE FYLKSLTLED VPGHGRVHYI CNSWVYPAKR YTKDRVFFSN KTYLPHETPE ALLKYREEEL VSLRGTGEGE LKEWDRVYDY
201: AYYNDLGVPP KNPRPVLGGS QEYPYPRRGR TGRKPTTEDP ETESRLPVTS SLDIYVPRDE RFGHLKMSDF LAYALKAIAQ IIQPALESVF DETPKEFDSF
301: EDVLKIYEEG IDLPNQALID SIVKNIPLEM LKEIFRTDGQ KFLKYPVPQV IKEDKTAWRT DEEFAREMLA GLNPVVIQLL KEFPPKSKLE RETYGDQNST
401: ITKSHIEESL DGLTVEEALE KERLFILDHH DTLMPYVGRI NTTGNKVYAS RTLLFLKDDG TLKPLVIELS LPHPDGDSFG AVSEVYTPGE GVYDSLWQLA
501: KAYVGVNDSG NHQLISHWLQ THASIEPFVI ATNRQLSVLH PVFKLLEPHY RDTMNINALA RQILINGGGI FEITVFPSKY AMEMSSFIYK NHWTFPDQAL
601: PAELKKRGMA VEDPEAPHGL RLRIEDYPYA VDGLEVWYAI ESWVQDYIPL YYKSDEDVQN DTELQAWWKE VREEGHGDKK SEPWWPKMQT RKELIDSCTI
701: IIWVASALHA AVNFGQYPIA GYLPNRPTIS RQFMPKENTP EFEELEKNPD KVFLKTITAQ LQTLLGISLI EILSTHSSDE VYLGQRDSKE WAAEKEALEA
801: FEKFGDKVKE IEKKIDERNL DENLKNRTGP VKMPYTSLFP TSEGGVTGRG IPNSVSI

Best Arabidopsis Sequence Match ( AT1G55020.1 )
(BLAST)

001: MFGELRDLLT GGGNETTTKK VKGTVVLMKK NVLDFNDFNA SFLDRLHEFL GNKITLRLVS SDVTDSENGS KGKLGKAAHL EDWITTITSL TAGESAFKVT
101: FDYETDFGYP GAFLIRNSHF SEFLLKSLTL EDVPGHGRVH YICNSWIYPA KHYTTDRVFF SNKTYLPHET PATLLKYREE ELVSLRGTGE GELKEWDRVY
201: DYAYYNDLGV PPKNPRPVLG GTQEYPYPRR GRTGRKPTKE DPQTESRLPI TSSLDIYVPR DERFGHLKMS DFLAYALKAI AQFIQPALEA VFDDTPKEFD
301: SFEDVLKIYE EGIDLPNQAL IDSIVKNIPL EMLKEIFRTD GQKFLKFPVP QVIKEDKTAW RTDEEFAREM LAGLNPVVIQ LLKEFPPKSK LDSESYGNQN
401: STITKSHIEH NLDGLTVEEA LEKERLFILD HHDTLMPYLG RVNTTTTKTY ASRTLLFLKD DGTLKPLVIE LSLPHPNGDK FGAVSEVYTP GEGVYDSLWQ
501: LAKAFVGVND SGNHQLISHW MQTHASIEPF VIATNRQLSV LHPVFKLLEP HFRDTMNINA LARQILINGG GIFEITVFPS KYAMEMSSFI YKNHWTFPDQ
601: ALPAELKKRG MAVEDPEAPH GLRLRIKDYP YAVDGLEVWY AIESWVRDYI FLFYKIEEDI QTDTELQAWW KEVREEGHGD KKSEPWWPKM QTREELVESC
701: TIIIWVASAL HAAVNFGQYP VAGYLPNRPT ISRQYMPKEN TPEFEELEKN PDKVFLKTIT AQLQTLLGIS LIEILSTHSS DEVYLGQRDS KEWAAEKEAL
801: EAFEKFGEKV KEIEKNIDER NDDETLKNRT GLVKMPYTLL FPSSEGGVTG RGIPNSVSI

Arabidopsis Description

LOX1Linoleate 9S-lipoxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06327]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.