Factsheet for Solyc01g099210.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063477	Potato	cytosol	95.94	96.73
VIT_14s0128g00780.t01	Wine grape	cytosol	67.32	67.64
CDY70916	Canola	cytosol	39.4	67.46
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	66.63	66.78
VIT_14s0128g00790.t01	Wine grape	cytosol	66.63	66.17
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	65.82	66.05
VIT_06s0004g01580.t01	Wine grape	cytosol	25.38	65.37
KRH68548	Soybean	cytosol	64.89	65.27
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	65.12	65.2
Solyc01g099200.2.1	Tomato	cytosol, plastid	63.27	64.92
Solyc01g099180.2.1	Tomato	cytosol	63.62	64.29
KRH33939	Soybean	cytosol, endoplasmic reticulum	64.43	64.28
Os03t0700400-00	Rice	cytosol, plasma membrane	9.27	63.49
AT1G55020.1	Thale cress	cytosol	62.8	63.1
Bra021322.1-P	Field mustard	cytosol	62.46	62.89
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	62.46	62.82
Solyc09g075860.2.1	Tomato	cytosol, nucleus	62.22	61.23
TraesCS4A01G275800.1	Wheat	cytosol	16.92	61.09
GSMUA_AchrUn_...	Banana	cytosol	59.21	59.77
GSMUA_Achr1P22970_001	Banana	cytosol	58.29	59.46
GSMUA_AchrUn_...	Banana	cytosol	53.88	59.31
GSMUA_Achr1P24370_001	Banana	cytosol	57.24	58.32
Solyc09g075870.1.1	Tomato	cytosol	57.71	58.31
TraesCS6D01G122000.1	Wheat	cytosol	20.86	58.06
TraesCS4A01G359800.1	Wheat	cytosol	35.57	57.82
GSMUA_Achr6P25090_001	Banana	cytosol	55.85	57.52
GSMUA_Achr6P25110_001	Banana	cytosol	52.84	57.43
Zm00001d033623_P003	Maize	cytosol	57.47	57.21
TraesCS5A01G378800.2	Wheat	cytosol	51.45	57.07
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	57.47	56.56
EER93612	Sorghum	cytosol	56.66	56.47
Os03t0738600-01	Rice	plasma membrane, plastid	56.2	55.75
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	55.5	55.63
Os03t0699700-01	Rice	cytosol, plastid	55.62	55.62
TraesCS4D01G035200.1	Wheat	cytosol	53.3	55.49
TraesCS5B01G382600.1	Wheat	cytosol	55.27	55.4
TraesCS5A01G378900.1	Wheat	cytosol	55.04	54.98
EER93611	Sorghum	cytosol	56.43	54.84
TraesCS4B01G037700.3	Wheat	cytosol, golgi	54.69	54.82
HORVU5Hr1G093770.1	Barley	cytosol	54.81	54.81
TraesCS5B01G382400.1	Wheat	cytosol, golgi	54.35	54.79
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	54.81	54.75
EES04028	Sorghum	cytosol	55.16	54.52
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	54.58	54.51
TraesCS5B01G382300.1	Wheat	cytosol, unclear	54.58	54.51
TraesCS5A01G378700.1	Wheat	cytosol	54.58	54.51
EES04025	Sorghum	cytosol	54.81	54.49
TraesCS4B01G037800.1	Wheat	cytosol	55.27	54.33
TraesCS4D01G035100.1	Wheat	cytosol	55.16	54.21
TraesCS4A01G275900.1	Wheat	cytosol, unclear	55.16	54.21
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	55.5	54.0
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	54.81	53.87
KXG37783	Sorghum	cytosol	55.74	53.86
GSMUA_Achr9P19250_001	Banana	plasma membrane	59.21	53.73
Zm00001d033624_P001	Maize	cytosol	55.04	53.55
Zm00001d042541_P002	Maize	cytosol	54.81	53.51
TraesCS5D01G388800.1	Wheat	cytosol	55.27	53.18
TraesCS6B01G160400.1	Wheat	mitochondrion	53.42	52.81
TraesCS6A01G132500.1	Wheat	mitochondrion	53.42	52.81
TraesCS6A01G132200.1	Wheat	mitochondrion	53.42	52.81
TraesCS3B01G602500.1	Wheat	cytosol	53.77	52.67
TraesCS5A01G379000.1	Wheat	nucleus, unclear	46.47	52.08
Zm00001d042540_P008	Maize	cytosol	53.77	52.02
Os11t0575600-01	Rice	mitochondrion	52.26	51.96
TraesCS5D01G513100.1	Wheat	cytosol	52.26	51.96
TraesCS3B01G605700.1	Wheat	cytosol	53.07	51.75
HORVU5Hr1G117110.1	Barley	cytosol	52.14	50.73
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	28.39	50.2
GSMUA_Achr6P25080_001	Banana	cytosol	44.61	49.68
Solyc09g055900.2.1	Tomato	cytosol	26.3	49.13
TraesCS6B01G395700.1	Wheat	cytosol	45.89	48.77
Solyc01g009680.2.1	Tomato	plastid	24.91	48.53
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	28.74	48.53
Solyc01g099150.2.1	Tomato	nucleus	47.39	47.45
TraesCS6D01G121900.1	Wheat	mitochondrion	24.57	47.43
CDY43490	Canola	cytosol, plasma membrane	62.34	44.72
Solyc03g122340.2.1	Tomato	cytosol	43.34	41.19
Solyc01g006540.2.1	Tomato	plastid	42.29	40.74
Solyc05g014790.2.1	Tomato	plastid	42.29	40.07
Solyc01g006560.2.1	Tomato	plastid	41.6	39.8
Solyc12g011040.1.1	Tomato	nucleus, plastid	40.56	39.24
Solyc09g055890.2.1	Tomato	cytosol	15.53	36.12
GSMUA_Achr6P25100_001	Banana	cytosol	43.45	3.12

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491
GO:GO:0016702	GO:GO:0031408	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	InterPro:IPR001024
InterPro:IPR013819	InterPro:IPR027433	UniProt:K4B0V8	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS
InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477
InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711
PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF53	SMART:SM00308	SUPFAM:SSF48484
SUPFAM:SSF49723	EnsemblPlantsGene:Solyc01g099210.2	EnsemblPlants:Solyc01g099210.2.1	UniParc:UPI0002768B77	SEG:seg	:

Description

Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:K4B0V8]

Coordinates

chr1:+:89509072..89512847

Molecular Weight (calculated)

98861.9 Da

IEP (calculated)

6.102

GRAVY (calculated)

-0.495

Length

863 amino acids

Sequence
(BLAST)

001: MSRKLSDPSM DENASKKARY EAGETKTIKG TVVLMKKNFL DLTDAKDAVV DQIDEILGHK VSLQLISAVN TDAANKGRGK LGKPANLEGW KISTLTEREA
101: TFSVNFEWNE EIGIPGAFLI KNSHHNEFYL KTLTLDDVPG HGKVKFVCNS WIYHSEYYKK DRVFFANQTY LPNETPAPLQ YYREEELENL RGNGTGKREE
201: WDRVYDYDVY NDLGDPEKGE TYVRKILGGS SDYPYPRRGR TGRPPTKIDP KSESRLPLRK TLDIYVPRDE RFSPLKMSDF AATGLKSIFQ FLVPGFLALF
301: NKTPFEFDSF EDMWKLYEGG IRLPSKSFVD KIRDHLPLEL LKELLRSDGD YAFKFPMPQV IREDKSAWGT DEEFAREMLA GLNPVVIRCL QEFPPTSKLD
401: PTLSGEQRST ISEEHVKHNL DGLTIEKAIK DKRLFILDHH DSLMPYLKRI NTTTTQTYAS RTLLFLKEDG SLTPLAIELT RENEQSRIVS NVYTPAETGA
501: EATIWQLAKA YVTVNDSGFH QLVSHWLHTH AVTEPFIIAT NRQLSVLHPI YKLLHPHFRD TMYINALARQ MLINADGILE MTVFPGKFSL EMSATIYKDW
601: VFPQQALPAD LIKRGMAVED SSQPHGIKLV IEDYPYAVDG LEIWSAIKTW VRDYCNFYYK TDEMVKIDTE LQCWWKEARE KGHGDKKEQP WWPKMQTREE
701: LIDCCTIIIW IASALHAAIN FGQYPYGGYP PNRPSMSRRF MPEPETSEYE ELKSNPEKAF LKTITPLPQS ILGISLIEAL SLHTSDEVFL GKRAPEWTTD
801: EEPLQAFERF GKKLEEIEQK IIKMNDDPNL KNRVGPANIP YTLLCPSSEL GLTGRGIPNS VSI

Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)

001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI

Arabidopsis Description

LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.