CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063654	Potato	cytosol	65.67	67.41
TraesCS4A01G359800.1	Wheat	cytosol	61.51	58.38
TraesCS6D01G122000.1	Wheat	cytosol	35.52	57.74
TraesCS4A01G275800.1	Wheat	cytosol	27.38	57.74
AT1G55020.1	Thale cress	cytosol	92.86	54.48
CDY72550	Canola	cytosol	32.34	50.78
CDY61034	Canola	cytosol	44.05	49.66
CDY07409	Canola	cytosol	37.7	49.1
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	49.01	48.34
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	46.03	47.54
VIT_14s0128g00780.t01	Wine grape	cytosol	77.38	45.4
VIT_14s0128g00790.t01	Wine grape	cytosol	77.58	44.99
CDY61881	Canola	cytosol	31.15	44.23
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	73.61	43.14
KRH68548	Soybean	cytosol	73.41	43.12
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	73.61	43.09
PGSC0003DMT400028158	Potato	cytosol	73.61	43.04
PGSC0003DMT400054145	Potato	cytosol	72.82	42.77
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	72.82	42.58
PGSC0003DMT400063469	Potato	cytosol	70.24	41.99
Solyc01g099200.2.1	Tomato	cytosol, plastid	70.04	41.97
PGSC0003DMT400063446	Potato	cytosol	66.67	41.79
GSMUA_AchrUn_...	Banana	cytosol	64.48	41.45
CDY43490	Canola	cytosol, plasma membrane	98.61	41.31
CDY70843	Canola	cytosol	10.32	41.27
GSMUA_AchrUn_...	Banana	cytosol	69.25	40.82
GSMUA_Achr1P24370_001	Banana	cytosol	67.86	40.38
GSMUA_Achr6P25110_001	Banana	cytosol	63.1	40.05
Solyc01g099180.2.1	Tomato	cytosol	67.86	40.05
GSMUA_Achr1P22970_001	Banana	cytosol	66.87	39.83
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	67.66	39.74
PGSC0003DMT400063477	Potato	cytosol	67.46	39.72
Solyc01g099210.2.1	Tomato	cytosol	67.46	39.4
TraesCS5A01G379000.1	Wheat	nucleus, unclear	59.72	39.09
KRH33939	Soybean	cytosol, endoplasmic reticulum	67.06	39.08
TraesCS5A01G378800.2	Wheat	cytosol	60.32	39.07
CDY46325	Canola	cytosol	66.87	38.21
TraesCS4A01G275900.1	Wheat	cytosol, unclear	66.47	38.15
TraesCS4D01G035100.1	Wheat	cytosol	66.47	38.15
TraesCS4B01G037800.1	Wheat	cytosol	66.27	38.04
CDY38326	Canola	cytosol	66.87	37.99
GSMUA_Achr6P25090_001	Banana	cytosol	63.1	37.95
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	65.87	37.86
EER93611	Sorghum	cytosol	66.67	37.84
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	65.87	37.81
Os03t0699700-01	Rice	cytosol, plastid	64.09	37.43
PGSC0003DMT400063452	Potato	cytosol	59.33	37.42
CDY64191	Canola	cytosol	67.26	37.38
Zm00001d033623_P003	Maize	cytosol	63.69	37.02
GSMUA_Achr9P19250_001	Banana	plasma membrane	69.84	37.01
Zm00001d033624_P001	Maize	cytosol	65.08	36.98
EER93612	Sorghum	cytosol	63.49	36.95
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	64.88	36.87
TraesCS5B01G382300.1	Wheat	cytosol, unclear	63.1	36.81
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	62.9	36.69
TraesCS3B01G602500.1	Wheat	cytosol	64.09	36.66
KXG37783	Sorghum	cytosol	64.88	36.62
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	62.7	36.57
TraesCS5A01G378700.1	Wheat	cytosol	62.7	36.57
TraesCS3B01G605700.1	Wheat	cytosol	63.89	36.38
EES04028	Sorghum	cytosol	62.7	36.2
Os03t0738600-01	Rice	plasma membrane, plastid	62.3	36.09
TraesCS5D01G513100.1	Wheat	cytosol	62.1	36.06
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	61.51	36.0
TraesCS4B01G037700.3	Wheat	cytosol, golgi	60.91	35.66
EES04025	Sorghum	cytosol	61.31	35.6
TraesCS5B01G382400.1	Wheat	cytosol, golgi	60.32	35.51
TraesCS6A01G132200.1	Wheat	mitochondrion	61.51	35.51
TraesCS6A01G132500.1	Wheat	mitochondrion	61.51	35.51
TraesCS6B01G160400.1	Wheat	mitochondrion	61.31	35.4
HORVU5Hr1G093770.1	Barley	cytosol	60.52	35.34
Zm00001d042540_P008	Maize	cytosol	62.5	35.31
TraesCS5B01G382600.1	Wheat	cytosol	60.32	35.31
Zm00001d042541_P002	Maize	cytosol	61.51	35.07
TraesCS5A01G378900.1	Wheat	cytosol	59.72	34.84
HORVU5Hr1G117110.1	Barley	cytosol	61.31	34.84
Os11t0575600-01	Rice	mitochondrion	59.72	34.68
TraesCS4D01G035200.1	Wheat	cytosol	56.94	34.62
TraesCS5D01G388800.1	Wheat	cytosol	60.32	33.89
PGSC0003DMT400063461	Potato	cytosol	45.63	33.14
TraesCS6B01G395700.1	Wheat	cytosol	50.0	31.03
Solyc01g099150.2.1	Tomato	nucleus	51.39	30.05
VIT_06s0004g01580.t01	Wine grape	cytosol	19.84	29.85
CDY12655	Canola	plastid	51.39	28.37
CDY04196	Canola	plastid	50.0	28.35
CDY51606	Canola	plastid	51.19	28.26
GSMUA_Achr6P25080_001	Banana	cytosol	43.45	28.26
CDY07417	Canola	plastid	51.19	28.1
CDX79416	Canola	plastid	50.4	28.1
CDY61036	Canola	plastid	49.4	28.01
CDX91565	Canola	plastid	49.6	27.78
CDX67920	Canola	plastid	49.8	27.77
CDY64617	Canola	cytosol	49.6	27.2
CDX96769	Canola	cytosol	49.4	27.09
CDY49853	Canola	plastid	49.01	26.88
CDY21750	Canola	cytosol, mitochondrion, plastid	48.61	26.66
CDX81825	Canola	cytosol	47.82	26.22
CDX82146	Canola	plastid	43.25	25.65
CDY16339	Canola	plastid	38.1	25.23
CDY07407	Canola	cytosol, plastid	50.4	23.15
CDY28879	Canola	cytosol, endoplasmic reticulum, plastid	51.39	23.12
CDY61880	Canola	plastid	15.87	14.52
TraesCS6D01G121900.1	Wheat	mitochondrion	10.91	12.3
CDY70245	Canola	plastid	6.94	7.64
CDY07408	Canola	plastid	6.55	7.21
CDY70606	Canola	plastid	3.37	4.3
GSMUA_Achr6P25100_001	Banana	cytosol	43.65	1.83
CDY61882	Canola	plastid	0.0	0.0
Os03t0700400-00	Rice	cytosol, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.20.245.10	Gene3D:3.10.450.60	MapMan:50.1.12	GO:A0A078JZC6	UniProt:A0A078JZC6	EnsemblPlants:CDY70916
ProteinID:CDY70916	ProteinID:CDY70916.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491
GO:GO:0016702	GO:GO:0031408	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00008387001
InterPro:IPR013819	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS
InterPro:LipOase_plant	PFAM:PF00305	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711
PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF91	SUPFAM:SSF48484	UniPathway:UPA00382	UniParc:UPI0004EE132C
SEG:seg	:	:	:	:	:

Description

BnaCnng70330DLipoxygenase (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JZC6]

Coordinates

chrLK043736:-:867..2908

Molecular Weight (calculated)

57492.1 Da

IEP (calculated)

4.893

GRAVY (calculated)

-0.463

Length

504 amino acids

Sequence
(BLAST)

001: DKTAWRTDEE FAREMLAGLN PVVIQLLKEF PPKSKLDRET YGDQNSTFTK SHIEQSLDGL TVEEALEKER LFILDHHDTL MPYLGRINTT GNKVYASRTL
101: LFLKDDGTLK PLVIELSLPH PDGDSFGAVS EVYTPGEGVY DSLWQLAKAY VGVNDSGNHQ LISHWLQTHA SIEPFVIATN RQLSVLHPVF KLLEPHYRDT
201: MNINALARQI LINGGGIFEI TVFPSKYAME MSSFIYKNHW TFPDQALPAE LKKRGMAVED PEAPHGLRLR IEDYPYAVDG LEVWYAIESW VQDYIPLYYK
301: TDEDVQNDTE LQAWWKEVRE EGHGDKKSEP WWPKMQTRKE LIDSCTIIIW VASALHAAVN FGQYPIAGYL PNRPTISRQF MPKENTPEFE ELEKNPDKVF
401: LKSITAQLQT LLGISLIEIL STHSSDEVYL GQRDSKEWAA EKEALEAFEK FGDKVKEIEK KIDERNLDEN LKNRTGPVKM PYTSLFPTSE GGVTGRGIPN
501: SVSI

Best Arabidopsis Sequence Match ( AT1G55020.1 )
(BLAST)

001: MFGELRDLLT GGGNETTTKK VKGTVVLMKK NVLDFNDFNA SFLDRLHEFL GNKITLRLVS SDVTDSENGS KGKLGKAAHL EDWITTITSL TAGESAFKVT
101: FDYETDFGYP GAFLIRNSHF SEFLLKSLTL EDVPGHGRVH YICNSWIYPA KHYTTDRVFF SNKTYLPHET PATLLKYREE ELVSLRGTGE GELKEWDRVY
201: DYAYYNDLGV PPKNPRPVLG GTQEYPYPRR GRTGRKPTKE DPQTESRLPI TSSLDIYVPR DERFGHLKMS DFLAYALKAI AQFIQPALEA VFDDTPKEFD
301: SFEDVLKIYE EGIDLPNQAL IDSIVKNIPL EMLKEIFRTD GQKFLKFPVP QVIKEDKTAW RTDEEFAREM LAGLNPVVIQ LLKEFPPKSK LDSESYGNQN
401: STITKSHIEH NLDGLTVEEA LEKERLFILD HHDTLMPYLG RVNTTTTKTY ASRTLLFLKD DGTLKPLVIE LSLPHPNGDK FGAVSEVYTP GEGVYDSLWQ
501: LAKAFVGVND SGNHQLISHW MQTHASIEPF VIATNRQLSV LHPVFKLLEP HFRDTMNINA LARQILINGG GIFEITVFPS KYAMEMSSFI YKNHWTFPDQ
601: ALPAELKKRG MAVEDPEAPH GLRLRIKDYP YAVDGLEVWY AIESWVRDYI FLFYKIEEDI QTDTELQAWW KEVREEGHGD KKSEPWWPKM QTREELVESC
701: TIIIWVASAL HAAVNFGQYP VAGYLPNRPT ISRQYMPKEN TPEFEELEKN PDKVFLKTIT AQLQTLLGIS LIEILSTHSS DEVYLGQRDS KEWAAEKEAL
801: EAFEKFGEKV KEIEKNIDER NDDETLKNRT GLVKMPYTLL FPSSEGGVTG RGIPNSVSI

Arabidopsis Description

LOX1Linoleate 9S-lipoxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06327]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.