Factsheet for GSMUA_AchrUn_randomP19690_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	85.03	92.73
GSMUA_Achr1P24370_001	Banana	cytosol	90.88	91.74
CDY70916	Canola	cytosol	40.82	69.25
GSMUA_Achr6P25090_001	Banana	cytosol	67.02	68.38
GSMUA_Achr6P25110_001	Banana	cytosol	63.39	68.26
KRH35534	Soybean	cytosol	35.67	68.08
VIT_14s0128g00780.t01	Wine grape	cytosol	67.6	67.29
GSMUA_Achr1P22970_001	Banana	cytosol	66.08	66.78
GSMUA_Achr9P19250_001	Banana	plasma membrane	74.27	66.77
VIT_14s0128g00790.t01	Wine grape	cytosol	67.49	66.4
PGSC0003DMT400063654	Potato	cytosol	37.89	65.99
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	65.03	64.65
PGSC0003DMT400028158	Potato	cytosol	64.91	64.39
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	64.8	64.34
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	64.68	64.15
PGSC0003DMT400054145	Potato	cytosol	64.33	64.1
KRH68548	Soybean	cytosol	63.86	63.64
Bra021322.1-P	Field mustard	cytosol	63.16	63.01
KRH33939	Soybean	cytosol, endoplasmic reticulum	63.63	62.89
PGSC0003DMT400063446	Potato	cytosol	58.95	62.69
AT1G55020.1	Thale cress	cytosol	62.69	62.4
VIT_06s0004g01580.t01	Wine grape	cytosol	24.44	62.39
GSMUA_Achr6P25080_001	Banana	cytosol	56.49	62.32
Solyc01g099180.2.1	Tomato	cytosol	62.22	62.3
PGSC0003DMT400081370	Potato	cytosol	63.16	61.57
KRG91271	Soybean	cytosol	61.75	61.54
Solyc09g075860.2.1	Tomato	cytosol, nucleus	62.92	61.35
PGSC0003DMT400063461	Potato	cytosol	49.59	61.1
PGSC0003DMT400063469	Potato	cytosol	60.12	60.97
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	60.94	60.72
PGSC0003DMT400063452	Potato	cytosol	56.73	60.7
KRH16725	Soybean	cytosol	16.37	60.61
KRH62399	Soybean	cytosol, endoplasmic reticulum	16.73	60.59
Solyc01g099200.2.1	Tomato	cytosol, plastid	59.53	60.52
VIT_05s0020g03170.t01	Wine grape	cytosol	60.94	59.47
PGSC0003DMT400063477	Potato	cytosol	59.3	59.23
Solyc01g099210.2.1	Tomato	cytosol	59.77	59.21
KRH10050	Soybean	endoplasmic reticulum	58.83	58.69
KRH23266	Soybean	cytosol	56.49	58.47
KRH44090	Soybean	endoplasmic reticulum	58.13	57.79
KRH57987	Soybean	cytosol	17.43	57.75
KRH47522	Soybean	endoplasmic reticulum, nucleus	58.36	57.69
KRH44093	Soybean	endoplasmic reticulum	56.96	57.56
CDY38326	Canola	cytosol	59.65	57.5
KRH23265	Soybean	endoplasmic reticulum, nucleus	58.13	57.39
CDY46325	Canola	cytosol	59.18	57.37
AT3G22400.1	Thale cress	cytosol	59.42	57.34
KRH10053	Soybean	endoplasmic reticulum	57.19	57.33
KRH44095	Soybean	endoplasmic reticulum	58.01	57.27
KRH62403	Soybean	cytosol, endoplasmic reticulum	15.2	57.27
Solyc09g075870.1.1	Tomato	cytosol	57.19	57.26
KRH47525	Soybean	endoplasmic reticulum	58.13	57.26
KRH10051	Soybean	endoplasmic reticulum, nucleus	57.31	57.24
Bra039948.1-P	Field mustard	cytosol	59.3	57.16
KRH44097	Soybean	cytosol, endoplasmic reticulum	58.01	57.14
KRH23268	Soybean	endoplasmic reticulum	56.49	56.62
KRH23269	Soybean	endoplasmic reticulum	53.92	56.08
Bra023829.1-P	Field mustard	cytosol	59.18	56.04
KRH47066	Soybean	endoplasmic reticulum, nucleus	56.14	55.88
CDY64191	Canola	cytosol	59.06	55.68
KRH47067	Soybean	endoplasmic reticulum	56.26	55.67
KRH44094	Soybean	endoplasmic reticulum	56.26	55.48
KRG88464	Soybean	cytosol	29.36	55.04
KRH47069	Soybean	endoplasmic reticulum	28.66	53.85
KRH47064	Soybean	endoplasmic reticulum	35.2	52.81
KRH13357	Soybean	endoplasmic reticulum	14.62	51.65
KRH44092	Soybean	nucleus	51.58	51.46
GSMUA_Achr2P05850_001	Banana	cytosol	46.67	48.48
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	28.89	48.34
Solyc01g099150.2.1	Tomato	nucleus	45.85	45.48
CDY43490	Canola	cytosol, plasma membrane	63.04	44.8
GSMUA_Achr8P22700_001	Banana	plastid	40.94	41.27
GSMUA_Achr3P11780_001	Banana	plastid	40.23	40.66
GSMUA_Achr9P16020_001	Banana	plastid	40.82	39.84
GSMUA_Achr3P07870_001	Banana	plastid	40.82	39.7
GSMUA_Achr9P12470_001	Banana	plastid	39.06	39.62
GSMUA_Achr10P...	Banana	cytosol	39.88	38.75
GSMUA_Achr6P28450_001	Banana	plastid	39.42	38.74
GSMUA_Achr6P25100_001	Banana	cytosol	55.09	3.92

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702
GO:GO:0031408	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	EnsemblPlantsGene:GSMUA_AchrUn_randomG19690_001	EnsemblPlants:GSMUA_AchrUn_randomP19690_001
EnsemblPlants:GSMUA_AchrUn_randomT19690_001	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C
InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	UniProt:M0UAM8	PFAM:PF00305
PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081
PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF53	SMART:SM00308	SUPFAM:SSF48484
SUPFAM:SSF49723	UniParc:UPI0002950492	SEG:seg	:	:	:

Description

Lipoxygenase A [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG19690_001]

Coordinates

chrchrUn_random:+:94794133..94797372

Molecular Weight (calculated)

95751.8 Da

IEP (calculated)

6.540

GRAVY (calculated)

-0.261

Length

855 amino acids

Sequence
(BLAST)

001: MLSHIVGGGS HGVKVRGTVV LIRKNVLGFN DFGGTVIDNV LELLGRCISF QLISATVGDP NNGNRGVVGE EAYLEQHITL LPSLAAGETA YHVTFHCEEK
101: NGIPGAVIVK NNLGSEFFLK TLTLEDFPGK GRIHFVCNSW VYPAGKYKYD RVFFANTTYL PGDTPLPLKL YREEELCNLK GDNVAGKLQE WDRVYRYDYY
201: NDLGSPDKSK DLARPILGGT PEHPYPRRGR TGRPPTKTDP KSESRLPQLD LNIYVPRDEH FGHLKMADFL TYALKGVVAG VLPVLQAIAD VTPKEFDSFE
301: DVLKLYEGGL PVPHTPLLEE LRQRVPFEMI RELLRVEGGQ GLLKLPKPQV IQVDKTAWRT DEEFTREMLA GLNPVVIRRL EEFPPTSKLD PCKYGDHTST
401: ITAAHIEHHL DGLTVHQALE QNKLFILDHH DAYIPYLNRI NALAVKVYAS RTLLFLRQDS TLKPLAIELS LPHPDGEQHG AVSKVYTPAE SGVEGSIWQL
501: AKAYAAVTDS GYHGLISHWL NTHAVMEPFV IATHRHLSVI HPIHKLLSPH YRDTMTINAL ARQTLIPAGG IFELTVFPGR YALELSSTVY KSWNFREQAL
601: PADLIKRGVA VKDRDDKLCL LIEDYPYAVD GLQIWHAIET WVGEYCAIYY PTNDVVKADA ELQAWWKEVR EVGHGDKKDE PWWPAMLTTS ELIEACTTII
701: WIGSALHAAI NFGQYPYAGY LPNRPTMSRR FMPEPGTPEY EELKKNPDKV FLKTITSQLL TVLGLSTIEI LSNHASDEVY LGQRDTPEWT SDETAVKAFE
801: GFGERLKAIE AEIMKRNGDP SLKNRNGPAK MPYTLLFPSS GVGITGRGIP NSISI

Best Arabidopsis Sequence Match ( AT1G55020.1 )
(BLAST)

001: MFGELRDLLT GGGNETTTKK VKGTVVLMKK NVLDFNDFNA SFLDRLHEFL GNKITLRLVS SDVTDSENGS KGKLGKAAHL EDWITTITSL TAGESAFKVT
101: FDYETDFGYP GAFLIRNSHF SEFLLKSLTL EDVPGHGRVH YICNSWIYPA KHYTTDRVFF SNKTYLPHET PATLLKYREE ELVSLRGTGE GELKEWDRVY
201: DYAYYNDLGV PPKNPRPVLG GTQEYPYPRR GRTGRKPTKE DPQTESRLPI TSSLDIYVPR DERFGHLKMS DFLAYALKAI AQFIQPALEA VFDDTPKEFD
301: SFEDVLKIYE EGIDLPNQAL IDSIVKNIPL EMLKEIFRTD GQKFLKFPVP QVIKEDKTAW RTDEEFAREM LAGLNPVVIQ LLKEFPPKSK LDSESYGNQN
401: STITKSHIEH NLDGLTVEEA LEKERLFILD HHDTLMPYLG RVNTTTTKTY ASRTLLFLKD DGTLKPLVIE LSLPHPNGDK FGAVSEVYTP GEGVYDSLWQ
501: LAKAFVGVND SGNHQLISHW MQTHASIEPF VIATNRQLSV LHPVFKLLEP HFRDTMNINA LARQILINGG GIFEITVFPS KYAMEMSSFI YKNHWTFPDQ
601: ALPAELKKRG MAVEDPEAPH GLRLRIKDYP YAVDGLEVWY AIESWVRDYI FLFYKIEEDI QTDTELQAWW KEVREEGHGD KKSEPWWPKM QTREELVESC
701: TIIIWVASAL HAAVNFGQYP VAGYLPNRPT ISRQYMPKEN TPEFEELEKN PDKVFLKTIT AQLQTLLGIS LIEILSTHSS DEVYLGQRDS KEWAAEKEAL
801: EAFEKFGEKV KEIEKNIDER NDDETLKNRT GLVKMPYTLL FPSSEGGVTG RGIPNSVSI

Arabidopsis Description

LOX1Linoleate 9S-lipoxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06327]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.