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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH35534 Soybean cytosol 39.04 76.34
PGSC0003DMT400081370 Potato cytosol 69.86 69.78
Solyc09g075860.2.1 Tomato cytosol, nucleus 68.84 68.76
VIT_14s0128g00780.t01 Wine grape cytosol 66.55 67.87
KRG91271 Soybean cytosol 65.87 67.25
VIT_14s0128g00790.t01 Wine grape cytosol 66.55 67.09
AT3G22400.1 Thale cress cytosol 67.12 66.37
GSMUA_Achr1P22970_001 Banana cytosol 63.93 66.19
Bra039948.1-P Field mustard cytosol 67.01 66.18
CDY38326 Canola cytosol 66.55 65.73
Solyc09g075870.1.1 Tomato cytosol 63.7 65.34
CDY46325 Canola cytosol 65.75 65.31
Bra023829.1-P Field mustard cytosol 66.21 64.23
CDY64191 Canola cytosol 66.1 63.84
TraesCS4A01G275800.1 Wheat cytosol 17.35 63.6
TraesCS6D01G122000.1 Wheat cytosol 22.49 63.55
TraesCS4A01G359800.1 Wheat cytosol 38.01 62.71
GSMUA_AchrUn_... Banana cytosol 55.94 62.5
GSMUA_AchrUn_... Banana cytosol 59.47 60.94
VIT_06s0004g01580.t01 Wine grape cytosol 23.29 60.9
GSMUA_Achr1P24370_001 Banana cytosol 58.56 60.57
EER93612 Sorghum cytosol 58.68 59.35
Os03t0700700-01 Rice cytosol, plasma membrane, plastid 58.9 58.84
Zm00001d033623_P003 Maize cytosol 58.22 58.82
Os03t0699700-01 Rice cytosol, plastid 57.53 58.4
Os03t0700400-00 Rice cytosol, plasma membrane 8.33 57.94
KRG88464 Soybean cytosol 30.02 57.68
GSMUA_Achr9P19250_001 Banana plasma membrane 62.56 57.62
TraesCS4B01G037900.1 Wheat cytosol, golgi, nucleus, plastid, unclear 56.28 57.26
TraesCS5A01G378800.2 Wheat cytosol 50.8 57.2
Zm00001d013493_P001 Maize cytosol, extracellular, mitochondrion 57.88 57.16
TraesCS4B01G037700.3 Wheat cytosol, golgi 56.16 57.14
EER93611 Sorghum cytosol 57.88 57.09
GSMUA_Achr6P25110_001 Banana cytosol 51.71 57.05
TraesCS5B01G382300.1 Wheat cytosol, unclear 56.16 56.94
TraesCS4B01G037800.1 Wheat cytosol 56.96 56.83
GSMUA_Achr6P25090_001 Banana cytosol 54.34 56.8
TraesCS5A01G378700.1 Wheat cytosol 55.94 56.71
HORVU4Hr1G005920.1 Barley cytosol, plasma membrane 56.74 56.61
TraesCS4A01G275900.1 Wheat cytosol, unclear 56.74 56.61
Zm00001d033624_P001 Maize cytosol 57.31 56.6
TraesCS4D01G035100.1 Wheat cytosol 56.62 56.49
Os03t0738600-01 Rice plasma membrane, plastid 55.94 56.32
TraesCS5D01G388700.1 Wheat cytosol, golgi, unclear 55.48 56.25
TraesCS4D01G035200.1 Wheat cytosol 53.2 56.21
HORVU5Hr1G093700.3 Barley cytosol, plasma membrane 55.25 56.02
EES04025 Sorghum cytosol 55.48 55.99
TraesCS5B01G382400.1 Wheat cytosol, golgi 54.34 55.61
KXG37783 Sorghum cytosol 56.62 55.54
HORVU5Hr1G093770.1 Barley cytosol 54.45 55.27
TraesCS3B01G602500.1 Wheat cytosol 55.48 55.16
Zm00001d042541_P002 Maize cytosol 55.59 55.09
TraesCS3B01G605700.1 Wheat cytosol 55.48 54.92
EES04028 Sorghum cytosol 54.68 54.87
TraesCS6A01G132200.1 Wheat mitochondrion 54.22 54.41
TraesCS6A01G132500.1 Wheat mitochondrion 54.22 54.41
TraesCS5B01G382600.1 Wheat cytosol 53.42 54.36
TraesCS6B01G160400.1 Wheat mitochondrion 54.0 54.18
TraesCS5A01G378900.1 Wheat cytosol 53.31 54.05
Zm00001d042540_P008 Maize cytosol 55.02 54.04
TraesCS5A01G379000.1 Wheat nucleus, unclear 46.23 52.6
TraesCS5D01G513100.1 Wheat cytosol 52.05 52.53
HORVU5Hr1G054200.1 Barley cytosol, mitochondrion 29.22 52.46
TraesCS5D01G388800.1 Wheat cytosol 53.54 52.29
GSMUA_Achr6P25080_001 Banana cytosol 46.23 52.26
HORVU5Hr1G117110.1 Barley cytosol 52.28 51.63
Os11t0575600-01 Rice mitochondrion 50.57 51.04
VIT_00s0265g00170.t01 Wine grape cytosol 29.11 50.49
TraesCS6B01G395700.1 Wheat cytosol 45.89 49.51
VIT_13s0064g01500.t01 Wine grape cytosol 13.81 48.4
VIT_13s0064g01490.t01 Wine grape cytosol 21.0 46.12
VIT_07s0141g00340.t01 Wine grape cytosol, plastid 33.56 46.08
VIT_06s0004g01500.t01 Wine grape cytosol 41.1 45.51
VIT_06s0004g01480.t01 Wine grape cytosol 41.1 45.4
VIT_06s0004g01460.t01 Wine grape plastid 29.79 43.65
TraesCS6D01G121900.1 Wheat mitochondrion 22.26 43.62
VIT_07s0289g00010.t01 Wine grape cytosol 23.63 43.4
VIT_06s0004g01510.t01 Wine grape plastid 42.92 41.73
VIT_13s0064g01480.t01 Wine grape plastid 42.35 41.09
VIT_06s0004g01450.t01 Wine grape cytosol, extracellular 40.18 40.98
VIT_06s0004g01470.t01 Wine grape cytosol 42.24 40.97
VIT_09s0002g01080.t01 Wine grape cytosol 41.21 38.94
VIT_01s0010g02750.t01 Wine grape plastid 40.07 38.15
GSMUA_Achr6P25100_001 Banana cytosol 45.55 3.32
Protein Annotations
Gene3D:1.20.245.10EntrezGene:100251097wikigene:100251097Gene3D:2.60.60.20Gene3D:3.10.450.60Gene3D:4.10.372.10
Gene3D:4.10.375.10MapMan:50.1.12EMBL:AM424418ProteinID:CAN62372ProteinID:CAN62372.1ProteinID:CCB50407
ProteinID:CCB50407.1UniProt:F6HDN6EMBL:FN595749GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016491GO:GO:0016702GO:GO:0031408GO:GO:0046872GO:GO:0051213
GO:GO:0055114InterPro:IPR001024InterPro:IPR013819InterPro:IPR027433EntrezGene:LOC100251097wikigene:LOC100251097
InterPro:LipOaseInterPro:LipOase_CInterPro:LipOase_CSInterPro:LipOase_C_sfInterPro:LipOase_Fe_BSInterPro:LipOase_plant
InterPro:Lipoxygenase_dom_3PFAM:PF00305PFAM:PF01477InterPro:PLAT/LH2_domInterPro:PLAT/LH2_dom_sfPRINTS:PR00087
PRINTS:PR00468ScanProsite:PS00081ScanProsite:PS00711PFscan:PS50095PFscan:PS51393PANTHER:PTHR11771
PANTHER:PTHR11771:SF53SMART:SM00308SUPFAM:SSF48484SUPFAM:SSF49723UniParc:UPI00015C75D6ArrayExpress:VIT_05s0020g03170
EnsemblPlantsGene:VIT_05s0020g03170EnsemblPlants:VIT_05s0020g03170.t01unigene:Vvi.2697RefSeq:XP_002278007RefSeq:XP_002278007.1SEG:seg
Description
Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:F6HDN6]
Coordinates
chr5:+:4935140..4939255
Molecular Weight (calculated)
99737.1 Da
IEP (calculated)
6.012
GRAVY (calculated)
-0.456
Length
876 amino acids
Sequence
(BLAST)
001: MASTSETIGG FFEKVCGSNS KKSKDREDES QKIEGRVVLM KKNVMDLNDS KASLIDSVYE LVGKHVSLQL ISATHADPEN NLGGKIGKAT CLQKWNCTGP
101: AITARETEFA VTFDWEEGMG VPGALRVSNH HHSEFYLSSV TLEDVPGQGR IHFVCNSWVF PVRYTNERVF FSNKAYLPCH TPEPLRQYRE EELVKLRGNG
201: QGERKTWERI YDYDVYNDLG NPDKGPSHAR PILGGSEDYP YPRRGRTGRE RTKTDPCSEK RLSLLRLDIY VPRDERFSQV KFSDVLAYAV KSLVQVLIPE
301: IRSLFDKTVN EFDSFQDVLN IYEVGINGQN GGTHGTVRDC ISWEFIRELA HSDVGFHKFP MPDVIKENTT AWRTDEEFGR EMLAGVNPVI IRRLEEFPPV
401: SKLDINKYGN QTSTITKEHI EKNMNGLTVD QAIKNDKLFI LDYHDALMPF LSRINSTSTK TYATRTLLFL KEDGTLKPLA IELSLPHPQG ESYGATSQVY
501: TPAEDGVEGS VWQLAKAYAA VNDSGYHQLI SHWLNTHAVI EPFVIATNRQ LSVLHPIYKL LHPHFRDTMN INALARHILI NAGGFLEMTV FPGKYALEMS
601: AVIYKNWNFT EQGLPADLLK RGVAVEDPNY RHGLRLLIED YPYAVDGLEV WSAIETWVTE YCSFYYPTDD LIQCDTELQS WWMELRNKGH GDKKDEPWWS
701: EMQTLVDLTK TCTIIIWVAS ALHAAVNFGQ YPYAGYLPNR PTISRRFMPE PGTPEYQELE RNPDLAFLKT ITAQLQTLLG VSLIEILSRH STDEIYLGQR
801: DTPEWTSDAE PLAAFERFGS RLRGIETRIN QMNQDRRWNN RFGPVEMQYT LLYPNTSDYS RQGGLAGKGI PNSVSI
Best Arabidopsis Sequence Match ( AT3G22400.1 )
(BLAST)
001: MIHTDIAEIL CVKPKTTKKT KTMEEDVKKT TTMKIEGEVV VMKKNLLDFK DVMASLLDRV NELLGRRVSL HLISSHQPDP ANEKRGRLGK AAHLEKWVTK
101: IKTSVTAEET AFGVTFDWDE SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS NKAYLPSETP ELIKELREEE
201: LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK
301: SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV
401: ISRLQEFPPK SCLDSAKYGN QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL QADGTLKPLA IELSLPHAQG
501: ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV
601: FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH
701: GDKRHESWWP SMQTRDDLIE TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT ITPQLQTLLG ISIIEILSMH
801: STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI
Arabidopsis Description
LOX5Linoleate 9S-lipoxygenase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.