CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G275800.1	Wheat	cytosol	33.93	63.6
TraesCS6D01G122000.1	Wheat	cytosol	43.08	62.26
KRH16725	Soybean	cytosol	28.79	55.84
KRH62399	Soybean	cytosol, endoplasmic reticulum	28.79	54.66
KRH62403	Soybean	cytosol, endoplasmic reticulum	26.79	52.86
KRH57987	Soybean	cytosol	29.91	51.94
TraesCS4A01G359800.1	Wheat	cytosol	60.94	51.41
KRG91271	Soybean	cytosol	96.21	50.23
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	52.23	47.95
KRH13357	Soybean	endoplasmic reticulum	22.54	41.74
VIT_05s0020g03170.t01	Wine grape	cytosol	76.34	39.04
Solyc09g075870.1.1	Tomato	cytosol	73.66	38.64
Solyc09g075860.2.1	Tomato	cytosol, nucleus	75.22	38.43
PGSC0003DMT400081370	Potato	cytosol	74.78	38.2
AT3G22400.1	Thale cress	cytosol	72.77	36.79
TraesCS5A01G378800.2	Wheat	cytosol	63.62	36.63
CDY46325	Canola	cytosol	71.88	36.51
KRH68548	Soybean	cytosol	69.87	36.48
GSMUA_Achr1P22970_001	Banana	cytosol	68.75	36.41
GSMUA_AchrUn_...	Banana	cytosol	63.62	36.35
Bra039948.1-P	Field mustard	cytosol	71.88	36.3
CDY38326	Canola	cytosol	71.65	36.19
GSMUA_Achr1P24370_001	Banana	cytosol	68.08	36.01
Bra023829.1-P	Field mustard	cytosol	72.54	35.99
CDY64191	Canola	cytosol	72.54	35.83
TraesCS5A01G379000.1	Wheat	nucleus, unclear	61.38	35.71
GSMUA_AchrUn_...	Banana	cytosol	68.08	35.67
KRH33939	Soybean	cytosol, endoplasmic reticulum	67.86	35.14
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	68.08	34.78
KRH10882	Soybean	cytosol	33.48	34.56
EER93611	Sorghum	cytosol	68.3	34.46
TraesCS4B01G037800.1	Wheat	cytosol	67.19	34.28
GSMUA_Achr6P25110_001	Banana	cytosol	60.71	34.26
TraesCS4D01G035100.1	Wheat	cytosol	66.96	34.17
TraesCS4A01G275900.1	Wheat	cytosol, unclear	66.74	34.05
KRH10050	Soybean	endoplasmic reticulum	64.96	33.96
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	66.29	33.83
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	66.52	33.6
KRH44095	Soybean	endoplasmic reticulum	64.51	33.37
Zm00001d033624_P001	Maize	cytosol	66.07	33.37
Os03t0699700-01	Rice	cytosol, plastid	64.06	33.26
TraesCS6B01G160400.1	Wheat	mitochondrion	64.73	33.22
Zm00001d033623_P003	Maize	cytosol	64.29	33.22
KRH44090	Soybean	endoplasmic reticulum	63.62	33.14
TraesCS6A01G132200.1	Wheat	mitochondrion	64.51	33.1
TraesCS6A01G132500.1	Wheat	mitochondrion	64.51	33.1
TraesCS5B01G382400.1	Wheat	cytosol, golgi	63.17	33.06
EER93612	Sorghum	cytosol	63.62	32.91
KRH44097	Soybean	cytosol, endoplasmic reticulum	63.62	32.83
HORVU5Hr1G093770.1	Barley	cytosol	62.95	32.68
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	62.72	32.64
KRH47066	Soybean	endoplasmic reticulum, nucleus	62.5	32.6
KRH23268	Soybean	endoplasmic reticulum	62.05	32.59
GSMUA_Achr6P25090_001	Banana	cytosol	60.94	32.58
TraesCS3B01G602500.1	Wheat	cytosol	64.06	32.58
KRH23265	Soybean	endoplasmic reticulum, nucleus	62.95	32.56
TraesCS4B01G037700.3	Wheat	cytosol, golgi	62.28	32.4
KRH44093	Soybean	endoplasmic reticulum	61.16	32.39
KXG37783	Sorghum	cytosol	64.51	32.36
TraesCS3B01G605700.1	Wheat	cytosol	63.84	32.32
GSMUA_Achr9P19250_001	Banana	plasma membrane	68.53	32.28
KRH10051	Soybean	endoplasmic reticulum, nucleus	61.61	32.24
TraesCS5B01G382600.1	Wheat	cytosol	61.83	32.17
KRH10053	Soybean	endoplasmic reticulum	61.16	32.12
KRH47067	Soybean	endoplasmic reticulum	61.83	32.06
KRH47525	Soybean	endoplasmic reticulum	62.05	32.03
KRH47522	Soybean	endoplasmic reticulum, nucleus	61.83	32.02
Os03t0738600-01	Rice	plasma membrane, plastid	62.05	31.95
KRH44094	Soybean	endoplasmic reticulum	61.61	31.83
TraesCS5A01G378900.1	Wheat	cytosol	61.38	31.83
TraesCS5A01G378700.1	Wheat	cytosol	61.16	31.71
EES04025	Sorghum	cytosol	61.38	31.68
KRH44092	Soybean	nucleus	60.49	31.62
KRH23266	Soybean	cytosol	58.26	31.6
TraesCS5B01G382300.1	Wheat	cytosol, unclear	60.94	31.6
TraesCS5D01G513100.1	Wheat	cytosol	61.16	31.57
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	60.71	31.48
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	60.49	31.37
TraesCS4D01G035200.1	Wheat	cytosol	57.81	31.24
HORVU5Hr1G117110.1	Barley	cytosol	61.61	31.12
TraesCS5D01G388800.1	Wheat	cytosol	62.28	31.1
Zm00001d042541_P002	Maize	cytosol	61.16	31.0
Os11t0575600-01	Rice	mitochondrion	59.38	30.65
EES04028	Sorghum	cytosol	58.93	30.24
Zm00001d042540_P008	Maize	cytosol	59.82	30.04
KRH23269	Soybean	endoplasmic reticulum	54.46	29.68
KRH07345	Soybean	cytosol, plastid	52.46	27.29
KRH66214	Soybean	cytosol	52.68	27.25
TraesCS6B01G395700.1	Wheat	cytosol	46.21	25.49
KRG89889	Soybean	cytosol, plastid	48.88	25.47
KRG89883	Soybean	cytosol, plastid	48.66	25.38
KRH29668	Soybean	nucleus	50.45	24.94
KRH24671	Soybean	cytosol, plastid	50.67	24.84
KRH29669	Soybean	plastid	49.55	24.64
KRH17965	Soybean	plastid	50.45	24.62
KRH42646	Soybean	plastid	50.22	24.43
KRH18682	Soybean	cytosol, mitochondrion	48.88	24.04
KRG89888	Soybean	nucleus	48.21	23.92
KRH21441	Soybean	cytosol	47.54	23.41
KRH47615	Soybean	nucleus	48.21	23.3
KRH06197	Soybean	nucleus	47.32	22.99
KRH69027	Soybean	plastid	46.21	22.97
KRG97300	Soybean	plastid	45.54	22.69
GSMUA_Achr6P25080_001	Banana	cytosol	39.06	22.58
KRH50048	Soybean	cytosol	45.31	22.31
KRH47064	Soybean	endoplasmic reticulum	21.88	17.19
KRH47069	Soybean	endoplasmic reticulum	16.07	15.82
TraesCS6D01G121900.1	Wheat	mitochondrion	4.46	4.47
KRG88464	Soybean	cytosol	3.79	3.73
KRH30640	Soybean	cytosol	1.12	2.67
GSMUA_Achr6P25100_001	Banana	cytosol	39.06	1.46
Os03t0700400-00	Rice	cytosol, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.20.245.10	EntrezGene:100782558	Gene3D:3.10.450.60	MapMan:50.1.12	EMBL:ACUP02006687	EnsemblPlantsGene:GLYMA_10G249100
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408
GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	UniProt:I1LE57	InterPro:IPR013819	EnsemblPlants:KRH35534
ProteinID:KRH35534	ProteinID:KRH35534.1	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf
InterPro:LipOase_plant	PFAM:PF00305	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	PFscan:PS51393
PANTHER:PTHR11771	PANTHER:PTHR11771:SF53	SUPFAM:SSF48484	UniParc:UPI000294E6CB	:	:

Description

hypothetical protein

Coordinates

chr10:-:47725125..47727148

Molecular Weight (calculated)

51133.1 Da

IEP (calculated)

6.268

GRAVY (calculated)

-0.283

Length

448 amino acids

Sequence
(BLAST)

001: MLQAIQNMRL FILDHHDALM PYISRINSTN TKTYASRTIL FLQDDGTLKP LAIELSLPHP QGEQHGAVSK VFTPAQEGVS ASVWQLAKAY AAVNDSGYHQ
101: LVSHWLYTHA VIEPFIITTN RQLSILHPIH KLLKPHFRDT MHINALARHT LINAGGVLEK TVFPGKFALE MSSVIYKSWV FTEQALPADL LKRGMAVPDS
201: SCRHGLRLVI EDYPFAVDGI EIWDAIETWV TEYCNFYYTS NDMVEDDSEL QSWWKEVRNE GHGDLKDRHW WPEMKTKEEL IQSCTIIIWL ASAFHAAVNF
301: GQYPFAGYLP NRPTVSRRFM PEPGTPEYEE LKSDPDLAFL KTITAQFQTL LGVSLIEVLS RHSTEEVYLG QCENPEWTLD AEPLAAFERF RQKLLEIESN
401: IIERNKDKRL KNRNGPVKMP YTLLFPNTSD YSREGGLTGK GIPNSISI

Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)

001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI

Arabidopsis Description

LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.