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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023829.1-P Field mustard cytosol 98.9 99.34
CDY46325 Canola cytosol 94.71 97.39
AT3G22400.1 Thale cress cytosol 89.86 91.99
CDY38326 Canola cytosol 89.64 91.66
KRH35534 Soybean cytosol 35.83 72.54
KRG91271 Soybean cytosol 64.28 67.95
CDY70916 Canola cytosol 37.38 67.26
Solyc09g075860.2.1 Tomato cytosol, nucleus 64.28 66.48
PGSC0003DMT400081370 Potato cytosol 64.06 66.25
VIT_05s0020g03170.t01 Wine grape cytosol 63.84 66.1
GSMUA_Achr1P22970_001 Banana cytosol 59.54 63.83
Solyc09g075870.1.1 Tomato cytosol 59.76 63.47
KRG88464 Soybean cytosol 31.42 62.5
TraesCS4A01G275800.1 Wheat cytosol 16.43 62.34
GSMUA_AchrUn_... Banana cytosol 52.37 60.59
Os03t0700400-00 Rice cytosol, plasma membrane 8.38 60.32
GSMUA_Achr1P24370_001 Banana cytosol 55.9 59.86
TraesCS4A01G359800.1 Wheat cytosol 34.84 59.51
GSMUA_AchrUn_... Banana cytosol 55.68 59.06
TraesCS6D01G122000.1 Wheat cytosol 20.18 59.03
Os03t0700700-01 Rice cytosol, plasma membrane, plastid 55.9 57.81
Os03t0699700-01 Rice cytosol, plastid 54.13 56.89
EER93611 Sorghum cytosol 55.35 56.53
TraesCS4B01G037800.1 Wheat cytosol 54.69 56.49
TraesCS4A01G275900.1 Wheat cytosol, unclear 54.35 56.15
Zm00001d033624_P001 Maize cytosol 54.91 56.14
Zm00001d013493_P001 Maize cytosol, extracellular, mitochondrion 54.91 56.14
EER93612 Sorghum cytosol 53.58 56.12
Zm00001d033623_P003 Maize cytosol 53.58 56.06
TraesCS4D01G035100.1 Wheat cytosol 54.13 55.92
GSMUA_Achr6P25090_001 Banana cytosol 51.6 55.85
HORVU4Hr1G005920.1 Barley cytosol, plasma membrane 53.69 55.47
Os03t0738600-01 Rice plasma membrane, plastid 53.14 55.4
GSMUA_Achr6P25110_001 Banana cytosol 48.4 55.29
GSMUA_Achr9P19250_001 Banana plasma membrane 57.77 55.1
TraesCS4B01G037900.1 Wheat cytosol, golgi, nucleus, plastid, unclear 51.93 54.7
KXG37783 Sorghum cytosol 53.8 54.65
TraesCS5A01G378800.2 Wheat cytosol 46.86 54.63
TraesCS3B01G602500.1 Wheat cytosol 52.92 54.48
TraesCS4B01G037700.3 Wheat cytosol, golgi 51.71 54.47
TraesCS4D01G035200.1 Wheat cytosol 49.72 54.4
TraesCS5B01G382300.1 Wheat cytosol, unclear 51.71 54.28
TraesCS5D01G388700.1 Wheat cytosol, golgi, unclear 51.6 54.17
HORVU5Hr1G093700.3 Barley cytosol, plasma membrane 51.6 54.17
TraesCS5A01G378700.1 Wheat cytosol 51.49 54.05
HORVU5Hr1G093770.1 Barley cytosol 51.27 53.88
TraesCS5B01G382400.1 Wheat cytosol, golgi 50.61 53.62
TraesCS3B01G605700.1 Wheat cytosol 52.26 53.56
TraesCS5B01G382600.1 Wheat cytosol 50.5 53.19
Zm00001d042541_P002 Maize cytosol 51.82 53.17
EES04025 Sorghum cytosol 50.83 53.11
TraesCS5A01G378900.1 Wheat cytosol 50.5 53.01
EES04028 Sorghum cytosol 50.39 52.35
TraesCS6B01G160400.1 Wheat mitochondrion 50.39 52.35
TraesCS6A01G132200.1 Wheat mitochondrion 50.28 52.23
TraesCS6A01G132500.1 Wheat mitochondrion 50.28 52.23
Zm00001d042540_P008 Maize cytosol 50.5 51.35
TraesCS5D01G388800.1 Wheat cytosol 50.61 51.17
TraesCS5A01G379000.1 Wheat nucleus, unclear 43.44 51.17
TraesCS5D01G513100.1 Wheat cytosol 48.84 51.04
HORVU5Hr1G054200.1 Barley cytosol, mitochondrion 27.12 50.41
Os11t0575600-01 Rice mitochondrion 48.18 50.35
GSMUA_Achr6P25080_001 Banana cytosol 43.0 50.32
HORVU5Hr1G117110.1 Barley cytosol 49.06 50.17
TraesCS6B01G395700.1 Wheat cytosol 43.99 49.14
CDY72550 Canola cytosol 17.31 48.91
CDY07409 Canola cytosol 20.51 48.06
CDY61034 Canola cytosol 23.59 47.87
CDY61881 Canola cytosol 17.86 45.63
CDY43490 Canola cytosol, plasma membrane 59.65 44.97
TraesCS6D01G121900.1 Wheat mitochondrion 21.61 43.85
CDY64617 Canola cytosol 41.35 40.81
CDX96769 Canola cytosol 41.12 40.59
CDX81825 Canola cytosol 40.79 40.26
CDY21750 Canola cytosol, mitochondrion, plastid 40.57 40.04
CDY49853 Canola plastid 40.13 39.61
CDY04196 Canola plastid 38.48 39.26
CDX82146 Canola plastid 36.6 39.06
CDY70843 Canola cytosol 5.4 38.89
CDY61036 Canola plastid 38.04 38.81
CDX91565 Canola plastid 38.37 38.67
CDY16339 Canola plastid 32.3 38.5
CDX67920 Canola plastid 38.26 38.38
CDX79416 Canola plastid 37.93 38.05
CDY07417 Canola plastid 37.93 37.47
CDY12655 Canola plastid 37.6 37.35
CDY51606 Canola plastid 37.6 37.35
CDY61880 Canola plastid 20.29 33.39
CDY07407 Canola cytosol, plastid 38.26 31.63
CDY70245 Canola plastid 15.55 30.79
CDY28879 Canola cytosol, endoplasmic reticulum, plastid 37.71 30.54
CDY07408 Canola plastid 15.33 30.35
CDY70606 Canola plastid 13.01 29.87
CDY61882 Canola plastid 12.46 29.2
GSMUA_Achr6P25100_001 Banana cytosol 42.89 3.24
Protein Annotations
Gene3D:1.20.245.10Gene3D:2.60.60.20Gene3D:3.10.450.60Gene3D:4.10.372.10Gene3D:4.10.375.10MapMan:50.1.12
GO:A0A078JA01UniProt:A0A078JA01EnsemblPlants:CDY64191ProteinID:CDY64191ProteinID:CDY64191.1GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0006629GO:GO:0006633GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016491GO:GO:0016702GO:GO:0031408
GO:GO:0046872GO:GO:0051213GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00040971001InterPro:IPR001024InterPro:IPR013819
InterPro:IPR027433InterPro:LipOaseInterPro:LipOase_CInterPro:LipOase_CSInterPro:LipOase_C_sfInterPro:LipOase_plant
InterPro:Lipoxygenase_dom_3PFAM:PF00305PFAM:PF01477InterPro:PLAT/LH2_domInterPro:PLAT/LH2_dom_sfPRINTS:PR00087
PRINTS:PR00468ScanProsite:PS00081PFscan:PS50095PFscan:PS51393PANTHER:PTHR11771PANTHER:PTHR11771:SF53
SMART:SM00308SUPFAM:SSF48484SUPFAM:SSF49723UniPathway:UPA00382UniParc:UPI0004EDFC30SEG:seg
Description
BnaA01g36630DLipoxygenase [Source:UniProtKB/TrEMBL;Acc:A0A078JA01]
Coordinates
chrLK034416:+:21782..26208
Molecular Weight (calculated)
103926.0 Da
IEP (calculated)
7.171
GRAVY (calculated)
-0.474
Length
907 amino acids
Sequence
(BLAST)
001: MIHTHIAEIL CVKPKTKKTK KTKTMEEDVK NKKTKKTMKI EGEIVVMKKN LLDFKDTMAS LLDRIHELLG RRVSLHLISS LQPDLGIRSF FYSTRLHTYP
101: NEKRGRLGKA AHLEKWVTKI KTSVTAEETA FGVTFDWDES MGPPAAFVIK NHHRSQFYLK SLTLRNFPGG EGGAIHFVCN SWIYPSHRYR CDRVFFSNQA
201: YLPSETPELV KELREQELKN LRGEEKGGEL KEWDRVYDYA YYNDLGAPDK GPDSARPVLG GSLEFPYPRR GKTGRKPTKS DPKSESRLAL LNLNIYVPRD
301: ERFSHVKFSD FLAYALKSVT QVLVPEIASL CDKTINEFDS FEDVFHLYDG SIKLANGHTI SKLRDIIPWE MFRELVRNDG ERFMKFPLPD VLKQSRSAWR
401: TDEEFAREML AGLNPVVISR LKDFPPKSNL DSAKYGNQNS SIREEHIEPH MNGTSVQEAL EQNKLFILDH HDALMPYLTR INSTNTKTYA TRTLLLLQED
501: GTLKPLAIEL SLPHAQGESH GSVSKIFTPS EKGVEGTIWQ LAKAYAAVND SGYHQLISHW YVFELQTHAV IEPFIIASNR QLSVVHPIYK LLHPHFRDTM
601: NINALARHVL INSDGVLERT VFPSRYAMEM SSSIYKSWVF TDQALPKDLL KRGVAVEDPS SDNGVKLLIE DYPFAVDGLE IWSAIKTWVT EYCSFYYKND
701: RTVQTDTEIQ SWWTELRTEG HGDIQHESWW PSMQTRDDLI ETCTIIIWIA SALHAAVNFG QYPYAGFLPN RPTVSRRFMP EPGTKEYTEL EESEEVAFLK
801: TITPQLQTLL GISIIEILSM HSTDEIYLGQ RDSPNWTADD EPLEAFKRFG KSLEVIENNI IRRNNDKRLK NRTGPVNIPY TLLYPNTTDY TREGGLTGKG
901: IPNSVSI
Best Arabidopsis Sequence Match ( AT3G22400.1 )
(BLAST)
001: MIHTDIAEIL CVKPKTTKKT KTMEEDVKKT TTMKIEGEVV VMKKNLLDFK DVMASLLDRV NELLGRRVSL HLISSHQPDP ANEKRGRLGK AAHLEKWVTK
101: IKTSVTAEET AFGVTFDWDE SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS NKAYLPSETP ELIKELREEE
201: LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK
301: SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV
401: ISRLQEFPPK SCLDSAKYGN QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL QADGTLKPLA IELSLPHAQG
501: ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV
601: FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH
701: GDKRHESWWP SMQTRDDLIE TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT ITPQLQTLLG ISIIEILSMH
801: STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI
Arabidopsis Description
LOX5Linoleate 9S-lipoxygenase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.