Factsheet for Bra023829.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64191	Canola	cytosol	99.34	98.9
Bra039948.1-P	Field mustard	cytosol	91.03	92.67
AT3G22400.1	Thale cress	cytosol	90.59	92.33
KRH35534	Soybean	cytosol	35.99	72.54
KRG91271	Soybean	cytosol	64.78	68.18
Solyc09g075860.2.1	Tomato	cytosol, nucleus	64.78	66.7
PGSC0003DMT400081370	Potato	cytosol	64.56	66.48
VIT_05s0020g03170.t01	Wine grape	cytosol	64.23	66.21
GSMUA_Achr1P22970_001	Banana	cytosol	60.02	64.07
Solyc09g075870.1.1	Tomato	cytosol	60.13	63.58
Bra021322.1-P	Field mustard	cytosol	60.24	63.48
KRG88464	Soybean	cytosol	31.67	62.72
TraesCS4A01G275800.1	Wheat	cytosol	16.5	62.34
GSMUA_AchrUn_...	Banana	cytosol	52.6	60.59
Os03t0700400-00	Rice	cytosol, plasma membrane	8.42	60.32
GSMUA_Achr1P24370_001	Banana	cytosol	56.15	59.86
TraesCS4A01G359800.1	Wheat	cytosol	35.11	59.7
GSMUA_AchrUn_...	Banana	cytosol	56.04	59.18
TraesCS6D01G122000.1	Wheat	cytosol	20.27	59.03
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	56.37	58.04
Os03t0699700-01	Rice	cytosol, plastid	54.49	57.01
TraesCS4B01G037800.1	Wheat	cytosol	55.26	56.83
EER93611	Sorghum	cytosol	55.81	56.76
TraesCS4A01G275900.1	Wheat	cytosol, unclear	54.93	56.49
Zm00001d033624_P001	Maize	cytosol	55.37	56.37
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	55.37	56.37
TraesCS4D01G035100.1	Wheat	cytosol	54.71	56.26
EER93612	Sorghum	cytosol	53.93	56.24
Zm00001d033623_P003	Maize	cytosol	53.93	56.17
GSMUA_Achr6P25090_001	Banana	cytosol	52.05	56.09
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	54.26	55.81
Os03t0738600-01	Rice	plasma membrane, plastid	53.6	55.63
GSMUA_Achr6P25110_001	Banana	cytosol	48.84	55.54
GSMUA_Achr9P19250_001	Banana	plasma membrane	58.25	55.31
TraesCS3B01G602500.1	Wheat	cytosol	53.49	54.82
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	52.27	54.82
TraesCS5A01G378800.2	Wheat	cytosol	47.18	54.76
KXG37783	Sorghum	cytosol	54.04	54.65
TraesCS4B01G037700.3	Wheat	cytosol, golgi	52.05	54.59
TraesCS4D01G035200.1	Wheat	cytosol	50.06	54.52
TraesCS5B01G382300.1	Wheat	cytosol, unclear	52.05	54.4
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	51.94	54.28
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	51.94	54.28
TraesCS5A01G378700.1	Wheat	cytosol	51.83	54.17
HORVU5Hr1G093770.1	Barley	cytosol	51.61	54.0
TraesCS3B01G605700.1	Wheat	cytosol	52.82	53.9
TraesCS5B01G382400.1	Wheat	cytosol, golgi	50.94	53.74
Zm00001d042541_P002	Maize	cytosol	52.27	53.39
EES04025	Sorghum	cytosol	51.27	53.34
TraesCS5B01G382600.1	Wheat	cytosol	50.83	53.31
TraesCS5A01G378900.1	Wheat	cytosol	50.83	53.12
TraesCS6B01G160400.1	Wheat	mitochondrion	50.83	52.58
EES04028	Sorghum	cytosol	50.83	52.58
TraesCS6A01G132500.1	Wheat	mitochondrion	50.72	52.46
TraesCS6A01G132200.1	Wheat	mitochondrion	50.72	52.46
Zm00001d042540_P008	Maize	cytosol	50.94	51.57
TraesCS5A01G379000.1	Wheat	nucleus, unclear	43.74	51.3
TraesCS5D01G388800.1	Wheat	cytosol	50.94	51.28
TraesCS5D01G513100.1	Wheat	cytosol	49.17	51.15
Os11t0575600-01	Rice	mitochondrion	48.62	50.58
GSMUA_Achr6P25080_001	Banana	cytosol	43.3	50.45
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	27.24	50.41
HORVU5Hr1G117110.1	Barley	cytosol	49.39	50.28
TraesCS6B01G395700.1	Wheat	cytosol	44.41	49.38
TraesCS6D01G121900.1	Wheat	mitochondrion	21.93	44.3
Bra016602.1-P	Field mustard	cytosol	41.31	40.59
Bra030988.1-P	Field mustard	cytosol, mitochondrion, plastid	41.09	40.37
Bra008037.1-P	Field mustard	plastid	40.42	39.72
Bra004059.1-P	Field mustard	plastid	37.65	39.26
Bra004060.1-P	Field mustard	plastid	38.87	39.04
Bra003526.1-P	Field mustard	plastid	38.43	38.38
Bra004057.1-P	Field mustard	cytosol	37.65	38.16
Bra004081.1-P	Field mustard	plastid	38.43	37.8
Bra022535.1-P	Field mustard	plastid	33.89	37.73
Bra033991.1-P	Field mustard	plastid	37.87	37.46
Bra004058.1-P	Field mustard	plastid	38.43	32.8
GSMUA_Achr6P25100_001	Banana	cytosol	43.19	3.25

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
EnsemblPlantsGene:Bra023829	EnsemblPlants:Bra023829.1	EnsemblPlants:Bra023829.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408	GO:GO:0046872	GO:GO:0051213
GO:GO:0055114	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C
InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	UniProt:M4E4X5
PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468
ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF53
SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723	UniParc:UPI0002544353	SEG:seg	:

Description

AT3G22400 (E=0.0) LOX5 | LOX5; electron carrier/ iron ion binding / lipoxygenase/ metal ion binding / oxidoreductase, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

Coordinates

chrA01:-:20247885..20252318

Molecular Weight (calculated)

103316.0 Da

IEP (calculated)

7.386

GRAVY (calculated)

-0.481

Length

903 amino acids

Sequence
(BLAST)

001: MIHTHIAEIL CVKPKTKKTK KTKTMEEDVK NKKTKKTMKI EGEIVVMKKN LLDFKDTMAS LLDRIHELLG RRVSLHLISS LQPDLGIRSF FYSTRLHKPA
101: NEKRGRLGKA AHLEKWVTKI KTSVTAEETA FGVTFDWDES MGPPAAFVIK NHHRSQFYLK SLTLRNFPGG EGGAIHFVCN SWIYPSHRYR SDRVFFSNQA
201: YLPSETPELV KELREQELKN LRGEEKGGEL KEWDRVYDYA YYNDLGAPDK GPDSARPVLG GSLEFPYPRR GKTGRKPTKS DPRSESRLAL LNLNIYVPRD
301: ERFSHVKFSD FLAYALKSVT QVLVPEIASL CDKTINEFDS FEDVFHLYDG SIKLANGHTI SKLRDIIPWE MFRELVRNDG ERFLKFPLPD VLKQSRSAWR
401: TDEEFAREML AGLNPVVISR LKDFPPKSNL DSAKYGNQNS SIREEHIEPH MNGTSVQEAL EQNKLFILDH HDALMPYLTR INSTNTKTYA TRTLLLLQED
501: GTLKPLAIEL SLPHAQGESH GSVSKIFTPS EKGVEGTIWQ LAKAYAAVND SGYHQLISHW LQTHAVIEPF IIASNRQLSV VHPIYKLLHP HFRDTMNINA
601: LARHVLINSD GVLERTVFPS RYAMEMSSSI YKSWVFTDQA LPKDLLKRGV AVEDPSSDNG VKLLIEDYPF AVDGLEIWSA IKTWVTEYCS FYYKNDRTVQ
701: TDTEIQSWWT ELRTEGHGDI QHESWWPSMQ TRDDLIETCT IIIWIASALH AAVNFGQYPY AGFLPNRPTV SRRFMPEPGT KEYTELEESE EVAFLKTITP
801: QLQTLLGISI IEILSMHSTD EIYLGQRDSP NWTADDEPLE AFKRFGKSLE VIENNIIRRN NDKRLKNRTG PVNIPYTLLY PNTTDYTREG GLTGKGIPNS
901: VSI

Best Arabidopsis Sequence Match ( AT3G22400.1 )
(BLAST)

001: MIHTDIAEIL CVKPKTTKKT KTMEEDVKKT TTMKIEGEVV VMKKNLLDFK DVMASLLDRV NELLGRRVSL HLISSHQPDP ANEKRGRLGK AAHLEKWVTK
101: IKTSVTAEET AFGVTFDWDE SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS NKAYLPSETP ELIKELREEE
201: LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK
301: SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV
401: ISRLQEFPPK SCLDSAKYGN QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL QADGTLKPLA IELSLPHAQG
501: ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV
601: FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH
701: GDKRHESWWP SMQTRDDLIE TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT ITPQLQTLLG ISIIEILSMH
801: STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI

Arabidopsis Description

LOX5Linoleate 9S-lipoxygenase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.