Factsheet for GSMUA_Achr1P22970_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0128g00780.t01	Wine grape	cytosol	70.69	69.62
KRH35534	Soybean	cytosol	36.41	68.75
VIT_14s0128g00790.t01	Wine grape	cytosol	69.74	67.89
GSMUA_AchrUn_...	Banana	cytosol	62.41	67.35
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	68.44	67.17
CDY70916	Canola	cytosol	39.83	66.87
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	67.85	66.67
PGSC0003DMT400028158	Potato	cytosol	67.85	66.59
VIT_06s0004g01580.t01	Wine grape	cytosol	26.24	66.27
GSMUA_AchrUn_...	Banana	cytosol	66.78	66.08
Solyc09g075860.2.1	Tomato	cytosol, nucleus	68.44	66.02
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	68.32	65.91
Os03t0700400-00	Rice	cytosol, plasma membrane	9.81	65.87
PGSC0003DMT400081370	Potato	cytosol	68.2	65.79
KRH68548	Soybean	cytosol	66.67	65.73
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	66.19	65.12
GSMUA_Achr1P24370_001	Banana	cytosol	64.54	64.46
TraesCS4A01G275800.1	Wheat	cytosol	18.2	64.44
Bra021322.1-P	Field mustard	cytosol	65.25	64.41
PGSC0003DMT400054145	Potato	cytosol	65.25	64.34
KRH33939	Soybean	cytosol, endoplasmic reticulum	65.72	64.28
PGSC0003DMT400063461	Potato	cytosol	52.72	64.27
EER93611	Sorghum	cytosol	67.26	64.08
PGSC0003DMT400063654	Potato	cytosol	37.12	63.95
VIT_05s0020g03170.t01	Wine grape	cytosol	66.19	63.93
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	66.9	63.81
KRG91271	Soybean	cytosol	64.54	63.64
GSMUA_Achr6P25110_001	Banana	cytosol	59.69	63.6
AT1G55020.1	Thale cress	cytosol	64.54	63.56
PGSC0003DMT400063446	Potato	cytosol	60.17	63.31
GSMUA_Achr6P25090_001	Banana	cytosol	62.41	63.01
Solyc01g099180.2.1	Tomato	cytosol	63.59	63.0
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	65.25	62.87
Zm00001d033624_P001	Maize	cytosol	65.84	62.8
TraesCS4A01G275900.1	Wheat	cytosol, unclear	65.01	62.64
TraesCS4B01G037800.1	Wheat	cytosol	65.01	62.64
TraesCS6D01G122000.1	Wheat	cytosol	22.93	62.58
TraesCS4D01G035100.1	Wheat	cytosol	64.89	62.53
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	63.24	62.35
Solyc09g075870.1.1	Tomato	cytosol	62.65	62.06
Zm00001d033623_P003	Maize	cytosol	63.59	62.05
Os03t0699700-01	Rice	cytosol, plastid	63.12	61.88
EER93612	Sorghum	cytosol	63.24	61.78
PGSC0003DMT400063452	Potato	cytosol	58.27	61.7
Bra039948.1-P	Field mustard	cytosol	64.54	61.56
GSMUA_Achr9P19250_001	Banana	plasma membrane	69.15	61.51
AT3G22400.1	Thale cress	cytosol	64.3	61.4
CDY46325	Canola	cytosol	63.83	61.22
CDY38326	Canola	cytosol	64.18	61.22
TraesCS4B01G037700.3	Wheat	cytosol, golgi	62.06	60.98
TraesCS3B01G602500.1	Wheat	cytosol	63.48	60.95
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	61.82	60.74
TraesCS4D01G035200.1	Wheat	cytosol	59.46	60.68
KXG37783	Sorghum	cytosol	63.95	60.58
TraesCS3B01G605700.1	Wheat	cytosol	63.24	60.45
Os03t0738600-01	Rice	plasma membrane, plastid	61.82	60.11
TraesCS5A01G378800.2	Wheat	cytosol	55.2	60.03
Bra023829.1-P	Field mustard	cytosol	64.07	60.02
TraesCS4A01G359800.1	Wheat	cytosol	37.47	59.7
PGSC0003DMT400063469	Potato	cytosol	59.46	59.67
CDY64191	Canola	cytosol	63.83	59.54
Solyc01g099200.2.1	Tomato	cytosol, plastid	59.1	59.45
GSMUA_Achr6P25080_001	Banana	cytosol	54.37	59.35
HORVU5Hr1G093770.1	Barley	cytosol	60.28	59.1
KRH10050	Soybean	endoplasmic reticulum	59.69	58.93
TraesCS5B01G382400.1	Wheat	cytosol, golgi	59.57	58.88
TraesCS5B01G382600.1	Wheat	cytosol	59.57	58.54
TraesCS5B01G382300.1	Wheat	cytosol, unclear	59.69	58.45
PGSC0003DMT400063477	Potato	cytosol	59.1	58.41
EES04025	Sorghum	cytosol	59.93	58.41
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	59.57	58.33
TraesCS5A01G378700.1	Wheat	cytosol	59.57	58.33
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	59.57	58.33
Solyc01g099210.2.1	Tomato	cytosol	59.46	58.29
KRH44090	Soybean	endoplasmic reticulum	58.98	58.02
TraesCS5A01G378900.1	Wheat	cytosol	58.98	57.75
KRG88464	Soybean	cytosol	31.09	57.68
EES04028	Sorghum	cytosol	59.46	57.62
Zm00001d042541_P002	Maize	cytosol	59.93	57.35
KRH23265	Soybean	endoplasmic reticulum, nucleus	58.63	57.27
KRH44095	Soybean	endoplasmic reticulum	58.63	57.27
Zm00001d042540_P008	Maize	cytosol	59.93	56.84
KRH23266	Soybean	cytosol	55.44	56.78
KRH23268	Soybean	endoplasmic reticulum	56.97	56.51
KRH44097	Soybean	cytosol, endoplasmic reticulum	57.92	56.45
KRH44093	Soybean	endoplasmic reticulum	56.38	56.38
TraesCS6A01G132200.1	Wheat	mitochondrion	58.04	56.24
TraesCS6A01G132500.1	Wheat	mitochondrion	58.04	56.24
KRH47522	Soybean	endoplasmic reticulum, nucleus	57.45	56.19
KRH10051	Soybean	endoplasmic reticulum, nucleus	56.74	56.07
KRH10053	Soybean	endoplasmic reticulum	56.5	56.04
TraesCS6B01G160400.1	Wheat	mitochondrion	57.8	56.01
KRH47525	Soybean	endoplasmic reticulum	57.33	55.88
TraesCS5D01G388800.1	Wheat	cytosol	59.22	55.85
TraesCS5A01G379000.1	Wheat	nucleus, unclear	50.59	55.58
KRH44094	Soybean	endoplasmic reticulum	56.62	55.25
KRH47066	Soybean	endoplasmic reticulum, nucleus	55.79	54.95
KRH47067	Soybean	endoplasmic reticulum	56.03	54.86
KRH23269	Soybean	endoplasmic reticulum	52.96	54.5
TraesCS5D01G513100.1	Wheat	cytosol	55.67	54.26
KRH62399	Soybean	cytosol, endoplasmic reticulum	15.13	54.24
KRH16725	Soybean	cytosol	14.78	54.11
KRH47064	Soybean	endoplasmic reticulum	36.29	53.86
HORVU5Hr1G117110.1	Barley	cytosol	55.08	52.54
KRH57987	Soybean	cytosol	15.96	52.33
Os11t0575600-01	Rice	mitochondrion	53.43	52.07
KRH47069	Soybean	endoplasmic reticulum	27.9	51.87
TraesCS6B01G395700.1	Wheat	cytosol	49.65	51.72
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	29.31	50.82
KRH62403	Soybean	cytosol, endoplasmic reticulum	13.59	50.66
KRH44092	Soybean	nucleus	50.83	50.17
TraesCS6D01G121900.1	Wheat	mitochondrion	25.89	48.99
GSMUA_Achr2P05850_001	Banana	cytosol	47.64	48.97
Solyc01g099150.2.1	Tomato	nucleus	47.87	46.98
KRH13357	Soybean	endoplasmic reticulum	13.24	46.28
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	27.78	45.99
CDY43490	Canola	cytosol, plasma membrane	65.25	45.89
GSMUA_Achr8P22700_001	Banana	plastid	41.37	41.27
GSMUA_Achr9P16020_001	Banana	plastid	42.67	41.21
GSMUA_Achr3P07870_001	Banana	plastid	42.79	41.18
GSMUA_Achr10P...	Banana	cytosol	41.49	39.89
GSMUA_Achr6P28450_001	Banana	plastid	40.54	39.43
GSMUA_Achr3P11780_001	Banana	plastid	39.36	39.36
GSMUA_Achr9P12470_001	Banana	plastid	38.53	38.67
GSMUA_Achr6P25100_001	Banana	cytosol	53.66	3.78

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702
GO:GO:0031408	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G22970_001	EnsemblPlants:GSMUA_Achr1P22970_001
EnsemblPlants:GSMUA_Achr1T22970_001	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C
InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	UniProt:M0S2A5
PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468
ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF53
SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723	UniParc:UPI000294C15B	SEG:seg	:

Description

Probable lipoxygenase 4 [Source:GMGC_GENE;Acc:GSMUA_Achr1G22970_001]

Coordinates

chr1:+:17260575..17264763

Molecular Weight (calculated)

95570.7 Da

IEP (calculated)

6.489

GRAVY (calculated)

-0.367

Length

846 amino acids

Sequence
(BLAST)

001: MLHGFFDAIT GKHHEHHEAP KSSTTVKGSV LLMKKNVLDF NDFNASLLDG LHEFLGKGVS FQLVSATVAD PHNGNKGKIG PPAYLEEWIT TMTSVATGET
101: KFTVHFSWDE SQGVPGAIIV KNNHHSAFYL KTITLEGVPN KEHIHFVCNS WVYPVDKYKY DRIFFANNTY LPSKTPEPLK RYREEELVHL RGDDVTGELK
201: EHDRIYNYAY YNDLGNPDKG HDYARPILGG SQEQPYPRRG RTGRHPTKTD PNYESRLPLL SLDIYVPRDE RFGHLKMSDF LAYALKSLTQ SLLPTLSAVF
301: DTTPMEFDSF KDVLQLYEGG LPIPQSPELD EIRSHLPFEM LKELVRTDGE RVLKLPLPQV IQEDRNAWRT DEEFGREMLA GVNPVIISRV QEFPPVSKLD
401: PKVYGDHTSS INASHIEKNL EGLTVQKAMK ENKLFILDHH DALMPYLRRI NSGSNKIYAS RTLLLLKDDG TLKPLVIELS LPHPDGDQHG AVNRVFTPAE
501: QGVEGSIWQL AKAYACVNDS GYHQLISHWL NTHAVIEPFV IATNRQLSVV HPVYKLLSPH YRDTMNINAL ARQTLINAGG VLESTVFPGK YAMEMSSVVY
601: KSWKLTEQGL PDDLLKRGVA VEDPASPNKL RLLIKDYPFA VDGLAIWSAI ETWVTEYCSI YYSNDAAIRA DVELQAWWKE TCTTIIWVAS ALHAAVNFGQ
701: YPYAGYLPNR PTISRRFMPE PGTPEYHELE KNPDLAFLKT ITSQFQTILG VSLIEVLSRH SSDEVYLGQR DSPEWTTDRS ALEAFERFSH KLIEIENRII
801: SMNQDASLRN RTGPVKMPYT LLYPNVSDLT GVGGLTGRGI PNSVSI

Best Arabidopsis Sequence Match ( AT3G22400.1 )
(BLAST)

001: MIHTDIAEIL CVKPKTTKKT KTMEEDVKKT TTMKIEGEVV VMKKNLLDFK DVMASLLDRV NELLGRRVSL HLISSHQPDP ANEKRGRLGK AAHLEKWVTK
101: IKTSVTAEET AFGVTFDWDE SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS NKAYLPSETP ELIKELREEE
201: LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK
301: SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV
401: ISRLQEFPPK SCLDSAKYGN QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL QADGTLKPLA IELSLPHAQG
501: ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV
601: FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH
701: GDKRHESWWP SMQTRDDLIE TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT ITPQLQTLLG ISIIEILSMH
801: STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI

Arabidopsis Description

LOX5Linoleate 9S-lipoxygenase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.