CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16725	Soybean	cytosol	60.74	63.64
KRH62403	Soybean	cytosol, endoplasmic reticulum	59.09	63.0
KRH57987	Soybean	cytosol	63.64	59.69
KRH62399	Soybean	cytosol, endoplasmic reticulum	55.79	57.2
TraesCS4A01G275800.1	Wheat	cytosol	33.88	34.31
TraesCS6D01G122000.1	Wheat	cytosol	40.91	31.94
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	46.28	22.95
KRH35534	Soybean	cytosol	41.74	22.54
TraesCS4A01G359800.1	Wheat	cytosol	49.17	22.41
KRH10053	Soybean	endoplasmic reticulum	77.27	21.92
KRH23268	Soybean	endoplasmic reticulum	76.03	21.57
KRH10051	Soybean	endoplasmic reticulum, nucleus	70.25	19.86
KRH47069	Soybean	endoplasmic reticulum	33.88	18.02
KRH23269	Soybean	endoplasmic reticulum	61.16	18.0
KRH10050	Soybean	endoplasmic reticulum	63.22	17.85
KRH44095	Soybean	endoplasmic reticulum	62.81	17.55
KRH44097	Soybean	cytosol, endoplasmic reticulum	62.4	17.4
KRH44093	Soybean	endoplasmic reticulum	59.92	17.14
KRH44090	Soybean	endoplasmic reticulum	59.09	16.63
KRH47066	Soybean	endoplasmic reticulum, nucleus	58.68	16.53
KRH23265	Soybean	endoplasmic reticulum, nucleus	58.68	16.4
KRH44094	Soybean	endoplasmic reticulum	58.68	16.38
KRH47067	Soybean	endoplasmic reticulum	57.44	16.09
KRH47525	Soybean	endoplasmic reticulum	56.61	15.78
KRH68548	Soybean	cytosol	55.79	15.73
TraesCS5A01G379000.1	Wheat	nucleus, unclear	50.0	15.71
TraesCS5A01G378800.2	Wheat	cytosol	50.41	15.68
KRH47522	Soybean	endoplasmic reticulum, nucleus	54.96	15.38
KRH23266	Soybean	cytosol	52.07	15.25
Zm00001d033623_P003	Maize	cytosol	54.55	15.22
Zm00001d042541_P002	Maize	cytosol	54.96	15.05
KRH33939	Soybean	cytosol, endoplasmic reticulum	53.72	15.03
TraesCS5B01G382600.1	Wheat	cytosol	53.31	14.98
TraesCS5A01G378900.1	Wheat	cytosol	53.31	14.93
TraesCS5B01G382300.1	Wheat	cytosol, unclear	53.31	14.93
EER93612	Sorghum	cytosol	53.31	14.9
EES04025	Sorghum	cytosol	53.31	14.86
KRH44092	Soybean	nucleus	52.48	14.82
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	52.89	14.81
TraesCS5A01G378700.1	Wheat	cytosol	52.89	14.81
EES04028	Sorghum	cytosol	53.31	14.78
TraesCS5D01G513100.1	Wheat	cytosol	52.89	14.75
Os03t0699700-01	Rice	cytosol, plastid	52.48	14.72
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	52.48	14.7
GSMUA_AchrUn_...	Banana	cytosol	51.65	14.62
TraesCS5B01G382400.1	Wheat	cytosol, golgi	51.65	14.6
HORVU5Hr1G093770.1	Barley	cytosol	52.07	14.6
Os03t0738600-01	Rice	plasma membrane, plastid	52.07	14.48
Zm00001d042540_P008	Maize	cytosol	53.31	14.46
TraesCS5D01G388800.1	Wheat	cytosol	53.31	14.38
TraesCS4D01G035200.1	Wheat	cytosol	49.17	14.35
TraesCS4A01G275900.1	Wheat	cytosol, unclear	52.07	14.35
TraesCS4D01G035100.1	Wheat	cytosol	52.07	14.35
TraesCS4B01G037800.1	Wheat	cytosol	51.65	14.24
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	50.41	14.17
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	51.24	14.14
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	51.24	14.12
KRH10882	Soybean	cytosol	25.21	14.06
GSMUA_Achr1P24370_001	Banana	cytosol	49.17	14.05
HORVU5Hr1G117110.1	Barley	cytosol	51.24	13.98
TraesCS4B01G037700.3	Wheat	cytosol, golgi	49.59	13.94
TraesCS6A01G132200.1	Wheat	mitochondrion	50.0	13.86
TraesCS6A01G132500.1	Wheat	mitochondrion	50.0	13.86
TraesCS6B01G160400.1	Wheat	mitochondrion	50.0	13.86
TraesCS3B01G605700.1	Wheat	cytosol	50.41	13.79
KXG37783	Sorghum	cytosol	50.83	13.77
Zm00001d033624_P001	Maize	cytosol	50.0	13.64
EER93611	Sorghum	cytosol	50.0	13.63
GSMUA_Achr6P25110_001	Banana	cytosol	44.63	13.6
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	49.59	13.53
GSMUA_AchrUn_...	Banana	cytosol	43.8	13.52
TraesCS3B01G602500.1	Wheat	cytosol	49.17	13.51
TraesCS6B01G395700.1	Wheat	cytosol	45.04	13.42
GSMUA_Achr1P22970_001	Banana	cytosol	46.28	13.24
KRG91271	Soybean	cytosol	46.28	13.05
GSMUA_Achr6P25090_001	Banana	cytosol	43.8	12.65
GSMUA_Achr9P19250_001	Banana	plasma membrane	49.59	12.62
Os11t0575600-01	Rice	mitochondrion	44.21	12.33
KRH42646	Soybean	plastid	44.63	11.73
KRH66214	Soybean	cytosol	41.32	11.55
KRG89883	Soybean	cytosol, plastid	40.91	11.53
KRH07345	Soybean	cytosol, plastid	40.5	11.38
KRH69027	Soybean	plastid	40.91	10.99
KRG97300	Soybean	plastid	40.5	10.9
KRG89889	Soybean	cytosol, plastid	38.02	10.7
KRH29669	Soybean	plastid	39.26	10.54
KRH17965	Soybean	plastid	39.67	10.46
KRH18682	Soybean	cytosol, mitochondrion	39.26	10.43
KRH06197	Soybean	nucleus	39.67	10.41
KRH47615	Soybean	nucleus	39.67	10.36
KRH21441	Soybean	cytosol	38.84	10.33
KRG89888	Soybean	nucleus	38.43	10.3
KRH29668	Soybean	nucleus	38.02	10.15
KRH50048	Soybean	cytosol	37.19	9.89
KRH24671	Soybean	cytosol, plastid	37.19	9.85
GSMUA_Achr6P25080_001	Banana	cytosol	19.83	6.19
KRH47064	Soybean	endoplasmic reticulum	9.5	4.04
Os03t0700400-00	Rice	cytosol, plasma membrane	2.07	3.97
TraesCS6D01G121900.1	Wheat	mitochondrion	6.2	3.36
KRG88464	Soybean	cytosol	5.79	3.07
KRH30640	Soybean	cytosol	0.83	1.07
GSMUA_Achr6P25100_001	Banana	cytosol	20.25	0.41

Protein Annotations

Gene3D:1.20.245.10	MapMan:50.1.12	UniProt:A0A0R0G523	EMBL:ACUP02009701	EnsemblPlantsGene:GLYMA_15G233300	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016702
GO:GO:0046872	GO:GO:0055114	InterPro:IPR013819	EnsemblPlants:KRH13357	ProteinID:KRH13357	ProteinID:KRH13357.1
InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_C_sf	PFAM:PF00305	PFscan:PS51393	PANTHER:PTHR11771
PANTHER:PTHR11771:SF48	SUPFAM:SSF48484	UniParc:UPI0006EDA6A2	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr15:+:43893441..43895221

Molecular Weight (calculated)

28174.3 Da

IEP (calculated)

5.078

GRAVY (calculated)

-0.638

Length

242 amino acids

Sequence
(BLAST)

001: MNLTNHPPPP PTSLANPWTS SLPARDTQNL KTKEGSEKET LHEKSKDIYF KYICIQVITY HTYISKELLL KDPSAPHGVQ LLIEDYPYAS NGLEIWDAIK
101: SWVEEYVSFY YKSAEELQKD PELQAWWKEL VEMGHGDFKD KPWWQKMQTR EELVEAFATL IWIASALHAA VNFGQYPYGE TLIDLTVIEI LSRHASDEFY
201: LGQRDGEAFK RFGKNLEEIE KKLIEKNNDE TLRNRYGPAK MP

Best Arabidopsis Sequence Match ( AT1G55020.1 )
(BLAST)

001: MFGELRDLLT GGGNETTTKK VKGTVVLMKK NVLDFNDFNA SFLDRLHEFL GNKITLRLVS SDVTDSENGS KGKLGKAAHL EDWITTITSL TAGESAFKVT
101: FDYETDFGYP GAFLIRNSHF SEFLLKSLTL EDVPGHGRVH YICNSWIYPA KHYTTDRVFF SNKTYLPHET PATLLKYREE ELVSLRGTGE GELKEWDRVY
201: DYAYYNDLGV PPKNPRPVLG GTQEYPYPRR GRTGRKPTKE DPQTESRLPI TSSLDIYVPR DERFGHLKMS DFLAYALKAI AQFIQPALEA VFDDTPKEFD
301: SFEDVLKIYE EGIDLPNQAL IDSIVKNIPL EMLKEIFRTD GQKFLKFPVP QVIKEDKTAW RTDEEFAREM LAGLNPVVIQ LLKEFPPKSK LDSESYGNQN
401: STITKSHIEH NLDGLTVEEA LEKERLFILD HHDTLMPYLG RVNTTTTKTY ASRTLLFLKD DGTLKPLVIE LSLPHPNGDK FGAVSEVYTP GEGVYDSLWQ
501: LAKAFVGVND SGNHQLISHW MQTHASIEPF VIATNRQLSV LHPVFKLLEP HFRDTMNINA LARQILINGG GIFEITVFPS KYAMEMSSFI YKNHWTFPDQ
601: ALPAELKKRG MAVEDPEAPH GLRLRIKDYP YAVDGLEVWY AIESWVRDYI FLFYKIEEDI QTDTELQAWW KEVREEGHGD KKSEPWWPKM QTREELVESC
701: TIIIWVASAL HAAVNFGQYP VAGYLPNRPT ISRQYMPKEN TPEFEELEKN PDKVFLKTIT AQLQTLLGIS LIEILSTHSS DEVYLGQRDS KEWAAEKEAL
801: EAFEKFGEKV KEIEKNIDER NDDETLKNRT GLVKMPYTLL FPSSEGGVTG RGIPNSVSI

Arabidopsis Description

LOX1Linoleate 9S-lipoxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06327]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.