CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47522	Soybean	endoplasmic reticulum, nucleus	81.8	82.08
KRH47067	Soybean	endoplasmic reticulum	71.2	71.53
KRH44094	Soybean	endoplasmic reticulum	71.43	71.51
KRH47066	Soybean	endoplasmic reticulum, nucleus	69.12	69.85
KRH23265	Soybean	endoplasmic reticulum, nucleus	69.59	69.75
KRH44090	Soybean	endoplasmic reticulum	69.01	69.65
KRH10050	Soybean	endoplasmic reticulum	67.97	68.84
KRH47064	Soybean	endoplasmic reticulum	44.93	68.42
KRH44093	Soybean	endoplasmic reticulum	66.13	67.85
KRH23266	Soybean	cytosol	63.94	67.19
KRH47069	Soybean	endoplasmic reticulum	34.68	66.15
KRH44097	Soybean	cytosol, endoplasmic reticulum	65.9	65.9
KRH44095	Soybean	endoplasmic reticulum	65.67	65.82
KRH16725	Soybean	cytosol	17.4	65.37
KRH10051	Soybean	endoplasmic reticulum, nucleus	64.4	65.3
KRH23268	Soybean	endoplasmic reticulum	63.94	65.06
KRH62399	Soybean	cytosol, endoplasmic reticulum	17.63	64.83
KRH10053	Soybean	endoplasmic reticulum	63.25	64.36
KRH23269	Soybean	endoplasmic reticulum	60.6	63.99
KRH35534	Soybean	cytosol	32.03	62.05
KRH62403	Soybean	cytosol, endoplasmic reticulum	16.13	61.67
KRH57987	Soybean	cytosol	17.97	60.47
GSMUA_AchrUn_...	Banana	cytosol	53.11	58.8
Os03t0700400-00	Rice	cytosol, plasma membrane	8.53	58.73
TraesCS4A01G359800.1	Wheat	cytosol	35.83	58.57
KRH33939	Soybean	cytosol, endoplasmic reticulum	57.95	58.15
GSMUA_AchrUn_...	Banana	cytosol	57.26	58.13
KRH68548	Soybean	cytosol	57.26	57.93
KRH44092	Soybean	nucleus	56.68	57.41
GSMUA_Achr1P22970_001	Banana	cytosol	55.88	57.33
GSMUA_Achr1P24370_001	Banana	cytosol	55.3	56.67
KRH13357	Soybean	endoplasmic reticulum	15.78	56.61
TraesCS4A01G275800.1	Wheat	cytosol	15.55	56.49
TraesCS6D01G122000.1	Wheat	cytosol	20.05	56.13
KRG91271	Soybean	cytosol	54.61	55.24
GSMUA_Achr6P25110_001	Banana	cytosol	49.88	54.53
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	54.84	54.28
Os03t0699700-01	Rice	cytosol, plastid	53.8	54.11
EER93611	Sorghum	cytosol	55.18	53.94
GSMUA_Achr6P25090_001	Banana	cytosol	51.84	53.7
Zm00001d033623_P003	Maize	cytosol	53.57	53.63
EER93612	Sorghum	cytosol	53.34	53.46
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	54.61	53.44
TraesCS4D01G035200.1	Wheat	cytosol	50.92	53.32
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	52.88	53.31
TraesCS5A01G378800.2	Wheat	cytosol	47.7	53.21
TraesCS4B01G037700.3	Wheat	cytosol, golgi	52.42	52.85
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	52.42	52.66
TraesCS5B01G382300.1	Wheat	cytosol, unclear	52.3	52.55
Zm00001d033624_P001	Maize	cytosol	53.69	52.54
TraesCS5A01G378700.1	Wheat	cytosol	52.07	52.31
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	52.07	52.31
EES04025	Sorghum	cytosol	52.3	52.3
Os03t0738600-01	Rice	plasma membrane, plastid	52.3	52.18
TraesCS4A01G275900.1	Wheat	cytosol, unclear	52.53	51.94
TraesCS4B01G037800.1	Wheat	cytosol	52.53	51.94
TraesCS4D01G035100.1	Wheat	cytosol	52.42	51.82
KXG37783	Sorghum	cytosol	53.11	51.62
Zm00001d042541_P002	Maize	cytosol	52.53	51.58
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	51.96	51.37
EES04028	Sorghum	cytosol	51.61	51.32
TraesCS5B01G382400.1	Wheat	cytosol, golgi	50.58	51.28
GSMUA_Achr9P19250_001	Banana	plasma membrane	56.11	51.21
TraesCS5B01G382600.1	Wheat	cytosol	50.69	51.1
HORVU5Hr1G093770.1	Barley	cytosol	50.69	50.98
TraesCS3B01G602500.1	Wheat	cytosol	51.61	50.85
TraesCS6B01G160400.1	Wheat	mitochondrion	51.04	50.74
TraesCS3B01G605700.1	Wheat	cytosol	51.73	50.73
TraesCS6A01G132200.1	Wheat	mitochondrion	50.92	50.63
TraesCS6A01G132500.1	Wheat	mitochondrion	50.92	50.63
Zm00001d042540_P008	Maize	cytosol	51.96	50.56
TraesCS5D01G513100.1	Wheat	cytosol	50.46	50.46
TraesCS5A01G378900.1	Wheat	cytosol	50.12	50.35
HORVU5Hr1G117110.1	Barley	cytosol	50.69	49.61
TraesCS5D01G388800.1	Wheat	cytosol	50.58	48.94
TraesCS5A01G379000.1	Wheat	nucleus, unclear	43.2	48.7
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	27.07	48.16
KRG88464	Soybean	cytosol	25.23	48.03
TraesCS6B01G395700.1	Wheat	cytosol	44.47	47.54
GSMUA_Achr6P25080_001	Banana	cytosol	42.4	47.48
Os11t0575600-01	Rice	mitochondrion	47.23	47.23
KRH10882	Soybean	cytosol	21.89	43.78
KRG89883	Soybean	cytosol, plastid	42.63	43.07
TraesCS6D01G121900.1	Wheat	mitochondrion	22.12	42.95
KRH69027	Soybean	plastid	43.32	41.73
KRH07345	Soybean	cytosol, plastid	41.36	41.7
KRG89889	Soybean	cytosol, plastid	41.24	41.63
KRH66214	Soybean	cytosol	41.13	41.22
KRG97300	Soybean	plastid	42.63	41.16
KRH42646	Soybean	plastid	43.66	41.15
KRH47615	Soybean	nucleus	43.78	40.99
KRH06197	Soybean	nucleus	43.43	40.89
KRH29669	Soybean	plastid	42.4	40.84
KRH17965	Soybean	plastid	42.97	40.63
KRH29668	Soybean	nucleus	41.94	40.18
KRH18682	Soybean	cytosol, mitochondrion	42.17	40.18
KRG89888	Soybean	nucleus	41.59	39.98
KRH24671	Soybean	cytosol, plastid	41.71	39.61
KRH21441	Soybean	cytosol	40.67	38.79
KRH50048	Soybean	cytosol	38.02	36.26
KRH30640	Soybean	cytosol	7.26	33.69
GSMUA_Achr6P25100_001	Banana	cytosol	41.13	2.97

Protein Annotations

Gene3D:1.20.245.10	EntrezGene:100802459	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10
MapMan:50.1.12	EMBL:ACUP02004154	EnsemblPlantsGene:GLYMA_07G034900	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408	GO:GO:0046872	GO:GO:0051213
GO:GO:0055114	UniProt:I1KH70	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433	EnsemblPlants:KRH47525
ProteinID:KRH47525	ProteinID:KRH47525.1	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf
InterPro:LipOase_Fe_BS	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom
InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095
PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF48	SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723
UniParc:UPI0002337D51	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:2782231..2787974

Molecular Weight (calculated)

97871.7 Da

IEP (calculated)

6.485

GRAVY (calculated)

-0.345

Length

868 amino acids

Sequence
(BLAST)

001: MLIGSLLNRR PKIKGTVVLM TKNVFDVNDF MATTRGGPAA VAGGIFGAAQ DIVGGIVDGA TAIFSRNIAI QLISATKSEN ALGHGKVGKL TYLEKHLPSL
101: PNLGDRQDAF DVYFEWDESF GIPGAFYIKN YMQSEFFLVS FKLEDVPNHG TILFACNSWV YNAKLYKKDR IFFANKAYLP NDTPTPLVKY RKEELENLRG
201: DGRGERKELD RIYDYDVYND LGNPDENDDL ARPILGGSSK HPYPRRGRTG RKPTKKDPRC ERPTSDTYIP RDENFGHLKS SDFLTYAIKS LTQNVLPQFN
301: TAFGFNNEFD SFEDVRCLFD GGVYLPTDVL SKISPIPVLK EIFRTDGEQA LKFPPPHVIK VRESEWMTDE EFGREMLAGV NPGMIQRLQE FPPKSKLDPT
401: EFGDQTSTIT KEHLEINLGG LTVEQALKGN KLFILDHHDA FIPFMNLING LPTAKSYATR TILFLQDDGT LKPLAIELSL PHPRGHEFGA DSRVVLPPAA
501: VNSAEGTIWL IAKAYVAVND TGYHQLISHW LNTHATIEPF VIATNRHLSV LHPIHKLLLP HYRDTMNINA LARQSLINAD GVIERSFLPG KYSLEMSSAV
601: YKSWVFTDQA LPADLIKRGM AIEDPCAPHG LRLVIEDYPY AVDGLEIWDA IQTWVKNYVS LYYPTDDAIK KDSELQAWWK EAVETGHGDL KDKPWWPKLN
701: TPQDLVHICS IIIWIASALH AAVNFGQYPY GGLILNRPTL TRRFLPEPGS KEYEELSTNY QKAYLRTITR KIEALVDLSV IEILSRHASD EIYLGKRDSD
801: DWTDDQKAIQ AFEKFGTKLK EIEAKINSRN KDSSLRNRNG PVQMPYTVLL PTSEEGLTFR GIPNSISI

Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)

001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI

Arabidopsis Description

LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.