Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 4
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 endoplasmic reticulum: 21107622
nucleus: 21132161
endoplasmic reticulum: 27224218
mitochondrion: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 21107622 doi
N Ahsan, T Nakamura, S Komatsu
National Institute of Crop Science, 2-1-18 Kannondai, Tsukuba, 305-8518, Japan.
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH16725 Soybean cytosol 25.79 95.24
KRH23268 Soybean endoplasmic reticulum 94.61 94.61
KRH62399 Soybean cytosol, endoplasmic reticulum 25.79 93.22
KRH62403 Soybean cytosol, endoplasmic reticulum 24.74 92.95
KRH10051 Soybean endoplasmic reticulum, nucleus 91.56 91.24
KRH57987 Soybean cytosol 27.43 90.7
KRH23269 Soybean endoplasmic reticulum 85.81 89.05
KRH13357 Soybean endoplasmic reticulum 21.92 77.27
KRH10050 Soybean endoplasmic reticulum 74.33 73.98
KRH44095 Soybean endoplasmic reticulum 73.74 72.63
KRH44097 Soybean cytosol, endoplasmic reticulum 73.74 72.47
KRH47069 Soybean endoplasmic reticulum 36.93 69.23
KRH23265 Soybean endoplasmic reticulum, nucleus 67.64 66.63
KRH47066 Soybean endoplasmic reticulum, nucleus 66.47 66.01
KRH47067 Soybean endoplasmic reticulum 66.82 65.97
KRH23266 Soybean cytosol 63.77 65.86
KRH47522 Soybean endoplasmic reticulum, nucleus 66.71 65.78
KRH44090 Soybean endoplasmic reticulum 66.24 65.7
KRH44094 Soybean endoplasmic reticulum 66.35 65.28
KRH44093 Soybean endoplasmic reticulum 64.6 65.13
KRH47525 Soybean endoplasmic reticulum 64.36 63.25
KRH47064 Soybean endoplasmic reticulum 41.27 61.75
KRH68548 Soybean cytosol 61.55 61.19
KRH35534 Soybean cytosol 32.12 61.16
TraesCS4A01G275800.1 Wheat cytosol 17.0 60.67
TraesCS4A01G359800.1 Wheat cytosol 36.46 58.57
Os03t0700400-00 Rice cytosol, plasma membrane 8.56 57.94
KRH33939 Soybean cytosol, endoplasmic reticulum 58.62 57.8
GSMUA_AchrUn_... Banana cytosol 52.76 57.4
GSMUA_AchrUn_... Banana cytosol 57.33 57.19
GSMUA_Achr1P22970_001 Banana cytosol 56.04 56.5
GSMUA_Achr1P24370_001 Banana cytosol 55.57 55.96
KRH44092 Soybean nucleus 56.04 55.78
KRG91271 Soybean cytosol 54.63 54.31
TraesCS6D01G122000.1 Wheat cytosol 19.7 54.19
TraesCS5A01G378800.2 Wheat cytosol 49.36 54.11
GSMUA_Achr6P25110_001 Banana cytosol 50.29 54.03
Os03t0699700-01 Rice cytosol, plastid 54.63 54.0
Os03t0700700-01 Rice cytosol, plasma membrane, plastid 55.33 53.82
Zm00001d033623_P003 Maize cytosol 54.63 53.75
TraesCS5B01G382600.1 Wheat cytosol 53.93 53.43
EER93612 Sorghum cytosol 54.16 53.35
GSMUA_Achr6P25090_001 Banana cytosol 52.4 53.34
EES04025 Sorghum cytosol 54.16 53.23
EER93611 Sorghum cytosol 55.22 53.04
Zm00001d013493_P001 Maize cytosol, extracellular, mitochondrion 55.1 52.99
TraesCS5B01G382400.1 Wheat cytosol, golgi 53.11 52.92
HORVU5Hr1G093700.3 Barley cytosol, plasma membrane 53.58 52.89
HORVU5Hr1G093770.1 Barley cytosol 53.46 52.84
TraesCS5A01G378700.1 Wheat cytosol 53.46 52.78
TraesCS5B01G382300.1 Wheat cytosol, unclear 53.46 52.78
TraesCS5A01G378900.1 Wheat cytosol 53.34 52.66
TraesCS5D01G388700.1 Wheat cytosol, golgi, unclear 53.22 52.55
TraesCS4B01G037900.1 Wheat cytosol, golgi, nucleus, plastid, unclear 52.87 52.38
Os03t0738600-01 Rice plasma membrane, plastid 53.34 52.3
Zm00001d033624_P001 Maize cytosol 54.28 52.2
Zm00001d042541_P002 Maize cytosol 54.04 52.15
TraesCS4D01G035200.1 Wheat cytosol 50.41 51.87
TraesCS4B01G037700.3 Wheat cytosol, golgi 52.29 51.8
KXG37783 Sorghum cytosol 54.16 51.74
TraesCS4D01G035100.1 Wheat cytosol 53.22 51.71
TraesCS4A01G275900.1 Wheat cytosol, unclear 53.11 51.59
TraesCS4B01G037800.1 Wheat cytosol 53.11 51.59
TraesCS5A01G379000.1 Wheat nucleus, unclear 46.42 51.43
HORVU4Hr1G005920.1 Barley cytosol, plasma membrane 52.76 51.25
EES04028 Sorghum cytosol 52.17 50.97
TraesCS5D01G388800.1 Wheat cytosol 53.58 50.95
GSMUA_Achr9P19250_001 Banana plasma membrane 56.39 50.58
Zm00001d042540_P008 Maize cytosol 52.76 50.45
TraesCS3B01G602500.1 Wheat cytosol 51.82 50.17
TraesCS3B01G605700.1 Wheat cytosol 52.05 50.17
TraesCS5D01G513100.1 Wheat cytosol 50.76 49.88
HORVU5Hr1G054200.1 Barley cytosol, mitochondrion 28.49 49.8
TraesCS6B01G160400.1 Wheat mitochondrion 50.53 49.37
TraesCS6A01G132200.1 Wheat mitochondrion 50.29 49.14
TraesCS6A01G132500.1 Wheat mitochondrion 50.29 49.14
HORVU5Hr1G117110.1 Barley cytosol 51.0 49.04
Os11t0575600-01 Rice mitochondrion 47.83 47.0
KRG88464 Soybean cytosol 24.97 46.71
TraesCS6B01G395700.1 Wheat cytosol 44.31 46.55
GSMUA_Achr6P25080_001 Banana cytosol 41.74 45.94
TraesCS6D01G121900.1 Wheat mitochondrion 22.63 43.18
KRG89883 Soybean cytosol, plastid 42.09 41.79
KRG89889 Soybean cytosol, plastid 42.09 41.74
KRH07345 Soybean cytosol, plastid 42.09 41.7
KRH66214 Soybean cytosol 42.32 41.69
KRH42646 Soybean plastid 43.73 40.5
KRG89888 Soybean nucleus 42.67 40.31
KRH29669 Soybean plastid 42.44 40.18
KRH17965 Soybean plastid 43.14 40.09
KRH69027 Soybean plastid 42.32 40.07
KRH29668 Soybean nucleus 42.56 40.07
KRG97300 Soybean plastid 41.97 39.82
KRH10882 Soybean cytosol 20.16 39.63
KRH47615 Soybean nucleus 42.91 39.48
KRH06197 Soybean nucleus 42.67 39.48
KRH18682 Soybean cytosol, mitochondrion 41.97 39.3
KRH24671 Soybean cytosol, plastid 42.09 39.28
KRH21441 Soybean cytosol 38.57 36.15
KRH50048 Soybean cytosol 37.51 35.16
KRH30640 Soybean cytosol 7.27 33.16
GSMUA_Achr6P25100_001 Banana cytosol 41.15 2.92
Protein Annotations
Gene3D:1.20.245.10Gene3D:2.60.60.20Gene3D:3.10.450.60Gene3D:4.10.372.10Gene3D:4.10.375.10MapMan:50.1.12
UniProt:A0A0R0G554EMBL:ACUP02009118EnsemblPlantsGene:GLYMA_15G026500GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0006629GO:GO:0006633GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016491GO:GO:0016702GO:GO:0031408GO:GO:0046872GO:GO:0051213
GO:GO:0055114InterPro:IPR001024InterPro:IPR013819InterPro:IPR027433EnsemblPlants:KRH10053ProteinID:KRH10053
ProteinID:KRH10053.1InterPro:LipOaseInterPro:LipOase_CInterPro:LipOase_CSInterPro:LipOase_C_sfInterPro:LipOase_Fe_BS
InterPro:LipOase_plantInterPro:Lipoxygenase_dom_3PFAM:PF00305PFAM:PF01477InterPro:PLAT/LH2_domInterPro:PLAT/LH2_dom_sf
PRINTS:PR00087PRINTS:PR00468ScanProsite:PS00081ScanProsite:PS00711PFscan:PS50095PFscan:PS51393
PANTHER:PTHR11771PANTHER:PTHR11771:SF48SMART:SM00308SUPFAM:SSF48484SUPFAM:SSF49723UniParc:UPI0006EDC931
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr15:+:2142191..2147489
Molecular Weight (calculated)
96647.0 Da
IEP (calculated)
5.943
GRAVY (calculated)
-0.373
Length
853 amino acids
Sequence
(BLAST)
001: MFPFGHKGQK IKGTMVVMQK NVLDINSITS VDGIVGTGLD FLGSALDTVT FLASSISIQL ISATKADGGK GKVGKATNLR GKITLPTIGA KEEAYDAQFD
101: WDSDFGIPGA FYIKNFMQNE FYLKSLILED IPNHGTIHFI CNSWVYNSKH YKTDRIFFAN NTYLPSETPA PLVKYREEEL KNVRGDGTGE RKEWDRIYDY
201: DVYNDLGDPD KGEKYARPVL GGSALPYPRR GRTGRGKTRK DPNSEKPSDF VYLPRDEAFG HLKSSDFLAY GIKSVAQDVL PVLTDAFDGN LLSLEFDNFA
301: EVRKLYEGGV TLPTNFLSKI TPIPIIKELF RTDGEQFLKY PPPKVMQVDK SAWMTDEEFA RETIAGLNPN VIKIIEEFPL SSKLDTQAYG DHTCIITKEH
401: LEPNLGGLTV EQAIQNKKLF ILDHHDYLIP YLRKINANTT KTYATRTIFF LKNDGTLTPL AIELSKPHPQ GEAYGPVSEV YVPSSEGVEA YIWLLAKAYV
501: VVNDACYHQI ISHWLNTHAV VEPFVIATNR HLSVVHPIYK LLFPHYRDTM NINSLARKSL VNADGIIEKT FLWGRYSLEM SAVIYKDWVF TDQALPNDLV
601: KRGVAVKDPS APHGVRLLIE DYPYASDGLE IWDAIKSWVE EYVSFYYKSD EELQKDPELQ AWWKELVEVG HGDLKDKPWW QKMQTREELV EASATLIWIA
701: SALHAAVNFG QYPYGGLILN RPTISRRFMP EKGSPEYDAL AKNPEKEFLK TITGKKETLI DLTIIEILSR HASDEFYLGQ RDGGDYWTSD AGPLEAFKRF
801: GKNLEEIEKK LIEKNNDETL RNRYGPAKMP YTLLYPSSEE GLTFRGIPNS ISI
Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)
001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
Arabidopsis Description
LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.