Factsheet for Zm00001d033624_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93611	Sorghum	cytosol	93.91	93.81
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	93.69	93.69
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	78.47	79.36
TraesCS4B01G037800.1	Wheat	cytosol	74.86	75.63
TraesCS4A01G275900.1	Wheat	cytosol, unclear	74.52	75.28
TraesCS4D01G035100.1	Wheat	cytosol	74.52	75.28
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	74.18	74.94
TraesCS3B01G602500.1	Wheat	cytosol	67.87	68.33
Zm00001d033623_P003	Maize	cytosol	66.4	67.94
TraesCS3B01G605700.1	Wheat	cytosol	67.08	67.23
KRH35534	Soybean	cytosol	33.37	66.07
GSMUA_Achr1P22970_001	Banana	cytosol	62.8	65.84
CDY70916	Canola	cytosol	36.98	65.08
Zm00001d042541_P002	Maize	cytosol	63.47	63.69
PGSC0003DMT400063654	Potato	cytosol	35.17	63.54
VIT_14s0128g00780.t01	Wine grape	cytosol	59.75	61.7
Zm00001d042540_P008	Maize	cytosol	62.01	61.66
Bra021322.1-P	Field mustard	cytosol	58.4	60.44
VIT_14s0128g00790.t01	Wine grape	cytosol	59.19	60.41
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	58.51	60.21
AT1G55020.1	Thale cress	cytosol	58.06	59.95
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	58.17	59.93
PGSC0003DMT400028158	Potato	cytosol	57.84	59.51
KRH62399	Soybean	cytosol, endoplasmic reticulum	15.67	58.9
PGSC0003DMT400063446	Potato	cytosol	53.33	58.83
KRH68548	Soybean	cytosol	56.71	58.62
KRG91271	Soybean	cytosol	56.71	58.62
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	56.71	58.49
PGSC0003DMT400081370	Potato	cytosol	57.72	58.38
Solyc09g075860.2.1	Tomato	cytosol, nucleus	57.61	58.27
PGSC0003DMT400054145	Potato	cytosol	56.26	58.16
KRH16725	Soybean	cytosol	15.11	58.01
PGSC0003DMT400063461	Potato	cytosol	45.32	57.93
Solyc01g099180.2.1	Tomato	cytosol	55.47	57.61
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	55.47	57.34
VIT_05s0020g03170.t01	Wine grape	cytosol	56.6	57.31
PGSC0003DMT400063452	Potato	cytosol	51.41	57.07
KRH33939	Soybean	cytosol, endoplasmic reticulum	55.47	56.88
KRH62403	Soybean	cytosol, endoplasmic reticulum	14.54	56.83
VIT_06s0004g01580.t01	Wine grape	cytosol	21.42	56.72
Bra039948.1-P	Field mustard	cytosol	56.71	56.71
CDY46325	Canola	cytosol	56.14	56.46
Solyc09g075870.1.1	Tomato	cytosol	54.34	56.44
AT3G22400.1	Thale cress	cytosol	56.37	56.43
CDY38326	Canola	cytosol	56.37	56.37
Solyc01g099200.2.1	Tomato	cytosol, plastid	53.44	56.36
KRH57987	Soybean	cytosol	16.23	55.81
PGSC0003DMT400063469	Potato	cytosol	52.87	55.63
KRH10050	Soybean	endoplasmic reticulum	53.66	55.54
Bra023829.1-P	Field mustard	cytosol	56.37	55.37
PGSC0003DMT400063477	Potato	cytosol	53.33	55.26
Solyc01g099210.2.1	Tomato	cytosol	53.55	55.04
KRH44090	Soybean	endoplasmic reticulum	53.33	55.0
CDY64191	Canola	cytosol	56.14	54.91
KRH23265	Soybean	endoplasmic reticulum, nucleus	53.55	54.85
KRH23266	Soybean	cytosol	51.07	54.84
KRH44093	Soybean	endoplasmic reticulum	51.97	54.49
KRH10051	Soybean	endoplasmic reticulum, nucleus	52.54	54.44
KRH47522	Soybean	endoplasmic reticulum, nucleus	52.99	54.34
KRH10053	Soybean	endoplasmic reticulum	52.2	54.28
KRH44095	Soybean	endoplasmic reticulum	52.76	54.04
KRH23268	Soybean	endoplasmic reticulum	51.63	53.69
KRH47525	Soybean	endoplasmic reticulum	52.54	53.69
KRH44094	Soybean	endoplasmic reticulum	52.09	53.29
KRH47066	Soybean	endoplasmic reticulum, nucleus	51.52	53.2
KRH44097	Soybean	cytosol, endoplasmic reticulum	51.86	53.0
KRH47067	Soybean	endoplasmic reticulum	51.3	52.66
KRH23269	Soybean	endoplasmic reticulum	48.7	52.55
KRG88464	Soybean	cytosol	26.04	50.66
KRH13357	Soybean	endoplasmic reticulum	13.64	50.0
KRH47064	Soybean	endoplasmic reticulum	31.91	49.65
KRH47069	Soybean	endoplasmic reticulum	25.14	49.01
KRH44092	Soybean	nucleus	46.9	48.54
Zm00001d041204_P001	Maize	cytosol	43.86	45.76
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	26.27	45.6
Solyc01g099150.2.1	Tomato	nucleus	42.84	44.08
CDY43490	Canola	cytosol, plasma membrane	58.4	43.06
Zm00001d002000_P003	Maize	cytosol, mitochondrion, plastid	41.49	40.71
Zm00001d053675_P001	Maize	plastid	39.91	39.12
Zm00001d003533_P001	Maize	plastid	41.04	38.68
Zm00001d015852_P004	Maize	plastid	39.68	38.64
Zm00001d025524_P001	Maize	plastid	40.02	38.21
Zm00001d027893_P001	Maize	plastid	40.36	36.98
Zm00001d031449_P001	Maize	mitochondrion	39.46	36.61

Protein Annotations

Gene3D:1.20.245.10	EntrezGene:100037803	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10
MapMan:50.1.12	EMBL:BT064459	UniProt:C0P840	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408	GO:GO:0046872	GO:GO:0051213
GO:GO:0055114	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C
InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	ProteinID:ONM08104.1
ProteinID:ONM08109.1	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087
PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771
PANTHER:PTHR11771:SF54	SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723	UniParc:UPI0001948E08	EnsemblPlantsGene:Zm00001d033624
EnsemblPlants:Zm00001d033624_P001	EnsemblPlants:Zm00001d033624_T001	:	:	:	:

Description

lipoxygenase4 lipoxygenase4

Coordinates

chr1:+:269056560..269072120

Molecular Weight (calculated)

100369.0 Da

IEP (calculated)

6.629

GRAVY (calculated)

-0.446

Length

887 amino acids

Sequence
(BLAST)

001: MFWHGVADRL TGKNKEAWNE GKIRGTVRLV KKEVLDVGDF NASLLDGVHR ILGWDDGVAF QLVSATAADP SNGSRGKVGK AAHLEEAVVS LKSTTDGETV
101: YRVSFEWDGS QGVPGAVLVR NLQHAEFFLK SLTLEGVPGR GTVVFVANSW IYPHNLYSQE RVFFANDTYL PSKMPAALVP YRQDELKILR GDDNPGPYKE
201: HDRVYRYDYY NDLGEPDKGE DHARPVLGGS QEHPYPRRCR TGRRPTETDP NSESRLFLLN LNIYVPRDER FGHLKMSDFL GYSLKAIIEA VLPTLGTFVD
301: DTPKEFDSFE DILGLYEPGP EAPNNPLVAE VRKRIPSEFL RSILPNGSHD HPLKMPLPNI IRSDVLKKAP EFKFGWRTDE EFARETLAGV NPVLIKRLTE
401: FPAKSTLDPS QYGDHTSKIT EAHIQHNMEG LSVQNALKKN RLFILDHHDH FMPYLNKINE LEGNFIYASR TLLFLKDDGT LKPLAVELSL PHPDGQQHGA
501: VSKVYTPAHS GAEGHVWQLA KAYACVNDSA WHQLISHWLN THAVIEPFVI ATNRQLSVVH PVHKLLSPHY RDTLNINALA RQTLINADGI FERTVFPAKY
601: ALGMSSDVYK SWNFNEQALP ADLVKRGVAV PDQSSPYGVR LLIKDYPYAV DGLVIWWAIE RWVKEYLDVY YPNDGELQRD VELQAWWKEV REEAHGDLKD
701: RDWWPRMDAV QRLARACTTV IWVASALHAA VNFGQYPYAG YLPNRPTVSR RPMPEPGSDD YKKLEAGQKE ADAVFIRTIT SQFQTILGIS LIEILSKHSS
801: DEVYLGQRDE PERWTSDARA LDAFRRFGSR LVEIEKRIRT MNDSPTLKNR KGPVEMPYML LYPNTSDVTG EKGEGLTAMG IPNSISI

Best Arabidopsis Sequence Match ( AT1G55020.1 )
(BLAST)

001: MFGELRDLLT GGGNETTTKK VKGTVVLMKK NVLDFNDFNA SFLDRLHEFL GNKITLRLVS SDVTDSENGS KGKLGKAAHL EDWITTITSL TAGESAFKVT
101: FDYETDFGYP GAFLIRNSHF SEFLLKSLTL EDVPGHGRVH YICNSWIYPA KHYTTDRVFF SNKTYLPHET PATLLKYREE ELVSLRGTGE GELKEWDRVY
201: DYAYYNDLGV PPKNPRPVLG GTQEYPYPRR GRTGRKPTKE DPQTESRLPI TSSLDIYVPR DERFGHLKMS DFLAYALKAI AQFIQPALEA VFDDTPKEFD
301: SFEDVLKIYE EGIDLPNQAL IDSIVKNIPL EMLKEIFRTD GQKFLKFPVP QVIKEDKTAW RTDEEFAREM LAGLNPVVIQ LLKEFPPKSK LDSESYGNQN
401: STITKSHIEH NLDGLTVEEA LEKERLFILD HHDTLMPYLG RVNTTTTKTY ASRTLLFLKD DGTLKPLVIE LSLPHPNGDK FGAVSEVYTP GEGVYDSLWQ
501: LAKAFVGVND SGNHQLISHW MQTHASIEPF VIATNRQLSV LHPVFKLLEP HFRDTMNINA LARQILINGG GIFEITVFPS KYAMEMSSFI YKNHWTFPDQ
601: ALPAELKKRG MAVEDPEAPH GLRLRIKDYP YAVDGLEVWY AIESWVRDYI FLFYKIEEDI QTDTELQAWW KEVREEGHGD KKSEPWWPKM QTREELVESC
701: TIIIWVASAL HAAVNFGQYP VAGYLPNRPT ISRQYMPKEN TPEFEELEKN PDKVFLKTIT AQLQTLLGIS LIEILSTHSS DEVYLGQRDS KEWAAEKEAL
801: EAFEKFGEKV KEIEKNIDER NDDETLKNRT GLVKMPYTLL FPSSEGGVTG RGIPNSVSI

Arabidopsis Description

LOX1Linoleate 9S-lipoxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06327]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.