Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0700400-00 | Rice | cytosol, plasma membrane | 21.49 | 57.14 |
| VIT_14s0128g00780.t01 | Wine grape | cytosol | 92.54 | 36.09 |
| VIT_14s0128g00790.t01 | Wine grape | cytosol | 91.64 | 35.33 |
| PGSC0003DMT400063461 | Potato | cytosol | 71.04 | 34.29 |
| TraesCS6D01G121900.1 | Wheat | mitochondrion | 45.67 | 34.23 |
| VIT_13s0064g01490.t01 | Wine grape | cytosol | 36.12 | 30.33 |
| Solyc01g099160.2.1 | Tomato | cytosol, extracellular, nucleus | 72.84 | 28.31 |
| PGSC0003DMT400063452 | Potato | cytosol | 67.46 | 28.29 |
| PGSC0003DMT400028158 | Potato | cytosol | 72.54 | 28.19 |
| AT1G55020.1 | Thale cress | cytosol | 71.64 | 27.94 |
| Solyc08g029000.2.1 | Tomato | cytosol, extracellular, nucleus | 71.64 | 27.87 |
| Bra021322.1-P | Field mustard | cytosol | 70.45 | 27.54 |
| KRH68548 | Soybean | cytosol | 70.15 | 27.39 |
| Solyc01g099180.2.1 | Tomato | cytosol | 69.25 | 27.17 |
| Solyc08g014000.2.1 | Tomato | cytosol, nucleus, plastid | 69.55 | 27.09 |
| KRH33939 | Soybean | cytosol, endoplasmic reticulum | 69.55 | 26.94 |
| Solyc01g099190.2.1 | Tomato | cytosol, extracellular, nucleus, plastid | 68.96 | 26.92 |
| PGSC0003DMT400054145 | Potato | cytosol | 68.96 | 26.92 |
| PGSC0003DMT400063446 | Potato | cytosol | 64.48 | 26.87 |
| GSMUA_Achr6P25080_001 | Banana | cytosol | 62.09 | 26.84 |
| GSMUA_Achr1P22970_001 | Banana | cytosol | 66.27 | 26.24 |
| PGSC0003DMT400063477 | Potato | cytosol | 65.07 | 25.47 |
| PGSC0003DMT400063469 | Potato | cytosol | 63.88 | 25.39 |
| Solyc01g099210.2.1 | Tomato | cytosol | 65.37 | 25.38 |
| Solyc01g099200.2.1 | Tomato | cytosol, plastid | 62.69 | 24.97 |
| GSMUA_Achr6P25090_001 | Banana | cytosol | 62.39 | 24.94 |
| VIT_07s0141g00340.t01 | Wine grape | cytosol, plastid | 47.46 | 24.92 |
| GSMUA_AchrUn_... | Banana | cytosol | 62.39 | 24.44 |
| Solyc01g099150.2.1 | Tomato | nucleus | 61.19 | 23.78 |
| GSMUA_Achr1P24370_001 | Banana | cytosol | 60.0 | 23.73 |
| VIT_07s0289g00010.t01 | Wine grape | cytosol | 33.43 | 23.48 |
| VIT_05s0020g03170.t01 | Wine grape | cytosol | 60.9 | 23.29 |
| GSMUA_AchrUn_... | Banana | cytosol | 54.33 | 23.21 |
| GSMUA_Achr6P25110_001 | Banana | cytosol | 54.63 | 23.05 |
| Os03t0700700-01 | Rice | cytosol, plasma membrane, plastid | 60.3 | 23.03 |
| GSMUA_Achr9P19250_001 | Banana | plasma membrane | 65.07 | 22.92 |
| HORVU4Hr1G005920.1 | Barley | cytosol, plasma membrane | 59.7 | 22.78 |
| TraesCS4B01G037800.1 | Wheat | cytosol | 57.91 | 22.1 |
| TraesCS4A01G275900.1 | Wheat | cytosol, unclear | 57.91 | 22.1 |
| TraesCS3B01G605700.1 | Wheat | cytosol | 58.21 | 22.03 |
| Os03t0699700-01 | Rice | cytosol, plastid | 56.72 | 22.02 |
| TraesCS4D01G035100.1 | Wheat | cytosol | 57.61 | 21.98 |
| TraesCS5A01G378800.2 | Wheat | cytosol | 51.04 | 21.98 |
| TraesCS3B01G602500.1 | Wheat | cytosol | 57.31 | 21.79 |
| EER93611 | Sorghum | cytosol | 57.31 | 21.62 |
| Zm00001d013493_P001 | Maize | cytosol, extracellular, mitochondrion | 57.01 | 21.53 |
| Zm00001d033624_P001 | Maize | cytosol | 56.72 | 21.42 |
| KXG37783 | Sorghum | cytosol | 55.82 | 20.94 |
| TraesCS6B01G395700.1 | Wheat | cytosol | 50.75 | 20.94 |
| TraesCS4B01G037900.1 | Wheat | cytosol, golgi, nucleus, plastid, unclear | 53.73 | 20.91 |
| EER93612 | Sorghum | cytosol | 54.03 | 20.9 |
| Zm00001d033623_P003 | Maize | cytosol | 54.03 | 20.88 |
| Os03t0738600-01 | Rice | plasma membrane, plastid | 54.03 | 20.8 |
| Os11t0575600-01 | Rice | mitochondrion | 53.73 | 20.74 |
| TraesCS4B01G037700.3 | Wheat | cytosol, golgi | 52.84 | 20.56 |
| TraesCS6A01G132500.1 | Wheat | mitochondrion | 53.43 | 20.5 |
| TraesCS6A01G132200.1 | Wheat | mitochondrion | 53.43 | 20.5 |
| TraesCS6B01G160400.1 | Wheat | mitochondrion | 53.43 | 20.5 |
| TraesCS5B01G382400.1 | Wheat | cytosol, golgi | 51.64 | 20.21 |
| TraesCS4D01G035200.1 | Wheat | cytosol | 49.55 | 20.02 |
| TraesCS5B01G382600.1 | Wheat | cytosol | 51.34 | 19.98 |
| CDY70916 | Canola | cytosol | 29.85 | 19.84 |
| EES04025 | Sorghum | cytosol | 51.34 | 19.82 |
| EES04028 | Sorghum | cytosol | 51.34 | 19.7 |
| HORVU5Hr1G093770.1 | Barley | cytosol | 50.75 | 19.7 |
| TraesCS5B01G382300.1 | Wheat | cytosol, unclear | 50.75 | 19.68 |
| TraesCS5A01G378700.1 | Wheat | cytosol | 50.75 | 19.68 |
| TraesCS5D01G388700.1 | Wheat | cytosol, golgi, unclear | 50.75 | 19.68 |
| Zm00001d042540_P008 | Maize | cytosol | 52.24 | 19.62 |
| CDY43490 | Canola | cytosol, plasma membrane | 70.45 | 19.62 |
| TraesCS5A01G378900.1 | Wheat | cytosol | 50.45 | 19.56 |
| HORVU5Hr1G093700.3 | Barley | cytosol, plasma membrane | 50.45 | 19.56 |
| TraesCS5D01G388800.1 | Wheat | cytosol | 51.34 | 19.18 |
| Zm00001d042541_P002 | Maize | cytosol | 50.45 | 19.12 |
| VIT_06s0004g01480.t01 | Wine grape | cytosol | 45.07 | 19.04 |
| VIT_06s0004g01500.t01 | Wine grape | cytosol | 43.58 | 18.46 |
| HORVU5Hr1G117110.1 | Barley | cytosol | 47.76 | 18.04 |
| TraesCS5D01G513100.1 | Wheat | cytosol | 46.57 | 17.97 |
| VIT_06s0004g01510.t01 | Wine grape | plastid | 45.67 | 16.98 |
| VIT_13s0064g01480.t01 | Wine grape | plastid | 44.48 | 16.5 |
| PGSC0003DMT400063654 | Potato | cytosol | 24.18 | 16.5 |
| VIT_06s0004g01470.t01 | Wine grape | cytosol | 42.99 | 15.95 |
| VIT_01s0010g02750.t01 | Wine grape | plastid | 43.58 | 15.87 |
| TraesCS5A01G379000.1 | Wheat | nucleus, unclear | 36.12 | 15.71 |
| VIT_09s0002g01080.t01 | Wine grape | cytosol | 42.99 | 15.53 |
| VIT_06s0004g01450.t01 | Wine grape | cytosol, extracellular | 39.7 | 15.48 |
| TraesCS4A01G359800.1 | Wheat | cytosol | 22.39 | 14.12 |
| VIT_06s0004g01460.t01 | Wine grape | plastid | 23.58 | 13.21 |
| VIT_00s0265g00170.t01 | Wine grape | cytosol | 19.1 | 12.67 |
| Solyc01g099170.2.1 | Tomato | cytosol, mitochondrion | 12.54 | 8.22 |
| HORVU5Hr1G054200.1 | Barley | cytosol, mitochondrion | 5.37 | 3.69 |
| VIT_13s0064g01500.t01 | Wine grape | cytosol | 1.49 | 2.0 |
| GSMUA_Achr6P25100_001 | Banana | cytosol | 61.79 | 1.72 |
| TraesCS6D01G122000.1 | Wheat | cytosol | 1.19 | 1.29 |
| TraesCS4A01G275800.1 | Wheat | cytosol | 0.9 | 1.26 |
Protein Annotations
| Gene3D:3.10.450.60 | Gene3D:4.10.372.10 | Gene3D:4.10.375.10 | MapMan:50.1.12 | ProteinID:CBI16430 | ProteinID:CBI16430.3 |
| UniProt:D7SLA2 | EMBL:FN594951 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016702 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR013819 |
| InterPro:IPR027433 | InterPro:LipOase | InterPro:LipOase_C | InterPro:LipOase_C_sf | InterPro:LipOase_plant | InterPro:Lipoxygenase_dom_3 |
| PFAM:PF00305 | PRINTS:PR00468 | PFscan:PS51393 | PANTHER:PTHR11771 | PANTHER:PTHR11771:SF53 | SUPFAM:SSF48484 |
| UniParc:UPI0001BE11A5 | ArrayExpress:VIT_06s0004g01580 | EnsemblPlantsGene:VIT_06s0004g01580 | EnsemblPlants:VIT_06s0004g01580.t01 | SEG:seg | : |
Description
No Description!
Coordinates
chr6:-:1988366..1989856
Molecular Weight (calculated)
38734.7 Da
IEP (calculated)
6.195
GRAVY (calculated)
-0.524
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MCLFYLLQTY LPSETPGPLR KYREGELVNL RGDGTGELKE WDRVYDYAYY NDLGNPDRDL KYTRPVLGGS AEYPYPRRGR TGRPPSEKDP NTESILPLLM
101: SLNIYVPRDE RFGHLKMLDF LAYALKSIVQ FLLPEFEALC DSTPNEFDSF QDVLDLYEGG IKVPEGTLLD KIKDNIPLEM LKELVRTDGE HLFKFPMPQV
201: IKEDKSAWRT DEEFAREMLA GLNPVVIRLL QEFPPKSKLD LEVYGNQNSS ITKEHIENHL DGLTINKAMK KKRLFILDDH DVFMPYRRRI NTTSMKTYAS
301: RTLLFLKDDR TLKPLAIELS LPHPNGMVQS RGIGH
101: SLNIYVPRDE RFGHLKMLDF LAYALKSIVQ FLLPEFEALC DSTPNEFDSF QDVLDLYEGG IKVPEGTLLD KIKDNIPLEM LKELVRTDGE HLFKFPMPQV
201: IKEDKSAWRT DEEFAREMLA GLNPVVIRLL QEFPPKSKLD LEVYGNQNSS ITKEHIENHL DGLTINKAMK KKRLFILDDH DVFMPYRRRI NTTSMKTYAS
301: RTLLFLKDDR TLKPLAIELS LPHPNGMVQS RGIGH
001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
Arabidopsis Description
LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.