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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_06s0004g01500.t01 Wine grape cytosol 88.78 89.0
VIT_06s0004g01460.t01 Wine grape plastid 55.11 73.08
VIT_13s0064g01500.t01 Wine grape cytosol 22.7 72.0
VIT_06s0004g01470.t01 Wine grape cytosol 81.21 71.32
Solyc01g009680.2.1 Tomato plastid 39.72 71.11
Os12t0559934-00 Rice cytosol 16.77 68.21
VIT_13s0064g01490.t01 Wine grape cytosol 34.3 68.17
VIT_06s0004g01450.t01 Wine grape cytosol, extracellular 72.0 66.47
PGSC0003DMT400020118 Potato cytosol 58.01 66.38
VIT_06s0004g01510.t01 Wine grape plastid 73.77 64.93
HORVU3Hr1G047210.1 Barley cytosol 16.77 61.29
VIT_13s0064g01480.t01 Wine grape plastid 69.48 61.02
KRH29669 Soybean plastid 66.46 58.49
KRG89883 Soybean cytosol, plastid 62.55 57.74
PGSC0003DMT400081909 Potato plastid 65.32 57.62
Solyc01g006540.2.1 Tomato plastid 64.82 57.37
Solyc01g006560.2.1 Tomato plastid 64.82 56.98
KRG89889 Soybean cytosol, plastid 61.66 56.86
KRH29668 Soybean nucleus 64.94 56.84
KRH24671 Soybean cytosol, plastid 65.45 56.78
Solyc12g011040.1.1 Tomato nucleus, plastid 63.05 56.05
KRG89888 Soybean nucleus 63.68 55.92
GSMUA_Achr3P11780_001 Banana plastid 59.02 55.32
KRH18682 Soybean cytosol, mitochondrion 63.43 55.21
HORVU7Hr1G050680.1 Barley peroxisome 47.54 55.12
KRH17965 Soybean plastid 63.68 55.01
OQU80925 Sorghum cytosol 58.64 53.76
GSMUA_Achr9P12470_001 Banana plastid 56.87 53.5
TraesCS7A01G034900.1 Wheat mitochondrion 19.67 53.24
TraesCS7D01G029400.1 Wheat cytosol 17.65 52.83
TraesCS6B01G014400.1 Wheat cytosol 39.85 52.58
TraesCS4D01G347300.1 Wheat cytosol 57.5 51.53
VIT_00s0265g00170.t01 Wine grape cytosol 32.66 51.29
Os08t0508800-01 Rice nucleus, plasma membrane 59.65 51.19
Os08t0509100-01 Rice nucleus 59.77 50.37
Zm00001d053675_P001 Maize plastid 57.25 50.17
HORVU6Hr1G033600.1 Barley plastid 56.37 49.89
Zm00001d015852_P004 Maize plastid 57.0 49.62
TraesCS7D01G244800.1 Wheat plastid 57.88 49.25
TraesCS7B01G145200.1 Wheat plastid 57.63 49.25
TraesCS6B01G193400.1 Wheat plastid 55.86 49.17
TraesCS7A01G246200.1 Wheat plastid 57.5 48.98
TraesCS6A01G166000.1 Wheat golgi 55.49 48.83
TraesCS6D01G154600.1 Wheat plastid 55.49 48.83
Os02t0194700-01 Rice plasma membrane 57.0 48.81
KXG29701 Sorghum plastid 55.99 48.42
Zm00001d031449_P001 Maize mitochondrion 57.88 48.01
TraesCS5D01G013400.1 Wheat plastid 55.23 47.2
HORVU5Hr1G001180.1 Barley plastid 55.23 47.05
TraesCS5A01G007900.1 Wheat plastid 54.98 46.98
TraesCS5B01G006500.1 Wheat plastid 54.98 46.98
HORVU7Hr1G006320.4 Barley plastid 53.34 45.63
Os12t0559200-01 Rice plastid 52.96 45.55
TraesCS5D01G041100.1 Wheat plastid 53.97 45.29
VIT_06s0004g01580.t01 Wine grape cytosol 19.04 45.07
HORVU6Hr1G000510.1 Barley plastid 52.96 45.06
TraesCS6D01G010100.1 Wheat plastid 53.34 45.05
VIT_01s0010g02750.t01 Wine grape plastid 52.08 44.89
Os12t0560200-00 Rice cytosol 5.55 44.44
TraesCS5B01G033000.1 Wheat plastid 53.09 44.32
VIT_14s0128g00780.t01 Wine grape cytosol 45.78 42.26
VIT_14s0128g00790.t01 Wine grape cytosol 45.65 41.66
VIT_09s0002g01080.t01 Wine grape cytosol 48.42 41.42
VIT_05s0020g03170.t01 Wine grape cytosol 45.4 41.1
TraesCS5A01G032800.1 Wheat mitochondrion 43.76 40.4
VIT_07s0141g00340.t01 Wine grape cytosol, plastid 29.89 37.15
VIT_07s0289g00010.t01 Wine grape cytosol 21.44 35.64
Protein Annotations
Gene3D:1.20.245.10EntrezGene:100245031wikigene:100245031MapMan:11.7.1.2Gene3D:2.60.60.20Gene3D:3.10.450.60
Gene3D:4.10.372.10Gene3D:4.10.375.10ProteinID:CCB43748ProteinID:CCB43748.1UniProt:F6GUA6EMBL:FN594951
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016491GO:GO:0016702
GO:GO:0031408GO:GO:0046872GO:GO:0051213GO:GO:0055114InterPro:IPR001024InterPro:IPR013819
InterPro:IPR027433EntrezGene:LOC100245031wikigene:LOC100245031InterPro:LipOaseInterPro:LipOase_CInterPro:LipOase_CS
InterPro:LipOase_C_sfInterPro:LipOase_Fe_BSInterPro:LipOase_plantInterPro:Lipoxygenase_dom_3PFAM:PF00305PFAM:PF01477
InterPro:PLAT/LH2_domInterPro:PLAT/LH2_dom_sfPRINTS:PR00087PRINTS:PR00468ScanProsite:PS00081ScanProsite:PS00711
PFscan:PS50095PFscan:PS51393PANTHER:PTHR11771PANTHER:PTHR11771:SF89SMART:SM00308SUPFAM:SSF48484
SUPFAM:SSF49723UniParc:UPI000210894DArrayExpress:VIT_06s0004g01480EnsemblPlantsGene:VIT_06s0004g01480EnsemblPlants:VIT_06s0004g01480.t01unigene:Vvi.8708
RefSeq:XP_002283135RefSeq:XP_002283135.1::::
Description
Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:F6GUA6]
Coordinates
chr6:+:1828850..1850267
Molecular Weight (calculated)
90385.2 Da
IEP (calculated)
5.205
GRAVY (calculated)
-0.410
Length
793 amino acids
Sequence
(BLAST)
001: MAFHDINQET GLETRPISRY AHRVGQEDGD VIYESEFVIP GDFGEIGAVL VQNEYRSEMF LKYIVLNGLP NGPIAFNCGS WVQSKFDDPE KRIFFSNKSY
101: LPSQTPRGLK DLREKELANL RGNGEGERKT SDRIYDYDVY NDLGNPDSKS ELGRSVLGGN ENYPYPRRCR TGRAPCQTDP LSETRSGSFY VPRDEEFSEV
201: KEASFLTKTV DSVLHALKPS LETSLLDSNL GFPLFSDIDQ LYYQGITIPK LKNPGLLQRI LPRLVKAVSD AKDRLLKFET PAMFLKDKFS WLRDEEFSRQ
301: TLAGVNPYSI KLVMEWPLKS ALDPDVYGPP ESAITKELVE RGIKGFMTVD EALEQKKLFI IDYHDLLLPY VSKVRQIEGT TLYGSRALFF LTPDCTLKPL
401: AIELTRPPMD GKPQWKQVFT PGLEATDHWL WKFAKTHFLA HDSGYHELVS HWLRTHCATE PYVIATNRQL SVMHPIYKLL HPHLRYTMQI NALAREVLIN
501: ADGIIETSFS TRKYSMELSS AAYDQQWRFD REALPADLIN RGIAVEDPSA SHGLKLLIED YPFANDGLIL WDALKQWVAD YVNYYYKDAS MVQSDPELQA
601: WWTEIRTKGH EDKKDEPWWP VLQTPEDLIG IIATIAWVAS AHHSAVNFGQ YAFAAYFPNR PTIARTNMPS EDPTREGWKR FLDNPHFELL VCFPSQVQAT
701: KVIAILDVLS NHSPDEEYIG EYMEPAWGEE PDIKEAFERF SARLKELEVI IDARNADNSL KNRGGAGVVP YELLKPFSEA GVTGKGVPYS ISI
Best Arabidopsis Sequence Match ( AT3G45140.1 )
(BLAST)
001: MYCRESLSSL QTLNVAKSLS SLFPKQSALI NPISAGRRNN LPRPNLRRRC KVTASRANIE QEGNTVKEPI QNIKVKGYIT AQEEFLEGIT WSRGLDDIAD
101: IRGRSLLVEL ISAKTDQRIT VEDYAQRVWA EAPDEKYECE FEMPEDFGPV GAIKIQNQYH RQLFLKGVEL KLPGGSITFT CESWVAPKSV DPTKRIFFSD
201: KSYLPSQTPE PLKKYRKEEL ETLQGKNREE VGEFTKFERI YDYDVYNDVG DPDNDPELAR PVIGGLTHPY PRRCKTGRKP CETDPSSEQR YGGEFYVPRD
301: EEFSTAKGTS FTGKAVLAAL PSIFPQIESV LLSPQEPFPH FKAIQNLFEE GIQLPKDAGL LPLLPRIIKA LGEAQDDILQ FDAPVLINRD RFSWLRDDEF
401: ARQTLAGLNP YSIQLVEEWP LISKLDPAVY GDPTSLITWE IVEREVKGNM TVDEALKNKR LFVLDYHDLL LPYVNKVREL NNTTLYASRT LFFLSDDSTL
501: RPVAIELTCP PNINKPQWKQ VFTPGYDATS CWLWNLAKTH AISHDAGYHQ LISHWLRTHA CTEPYIIAAN RQLSAMHPIY RLLHPHFRYT MEINARARQS
601: LVNGGGIIET CFWPGKYALE LSSAVYGKLW RFDQEGLPAD LIKRGLAEED KTAEHGVRLT IPDYPFANDG LILWDAIKEW VTDYVKHYYP DEELITSDEE
701: LQGWWSEVRN IGHGDKKDEP WWPVLKTQDD LIGVVTTIAW VTSGHHAAVN FGQYGYGGYF PNRPTTTRIR MPTEDPTDEA LKEFYESPEK VLLKTYPSQK
801: QATLVMVTLD LLSTHSPDEE YIGEQQEASW ANEPVINAAF ERFKGKLQYL EGVIDERNVN ITLKNRAGAG VVKYELLKPT SEHGVTGMGV PYSISI
Arabidopsis Description
LOX2Lipoxygenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P38418]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.