Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_06s0004g01500.t01 | Wine grape | cytosol | 88.78 | 89.0 |
VIT_06s0004g01460.t01 | Wine grape | plastid | 55.11 | 73.08 |
VIT_13s0064g01500.t01 | Wine grape | cytosol | 22.7 | 72.0 |
VIT_06s0004g01470.t01 | Wine grape | cytosol | 81.21 | 71.32 |
Solyc01g009680.2.1 | Tomato | plastid | 39.72 | 71.11 |
Os12t0559934-00 | Rice | cytosol | 16.77 | 68.21 |
VIT_13s0064g01490.t01 | Wine grape | cytosol | 34.3 | 68.17 |
VIT_06s0004g01450.t01 | Wine grape | cytosol, extracellular | 72.0 | 66.47 |
PGSC0003DMT400020118 | Potato | cytosol | 58.01 | 66.38 |
VIT_06s0004g01510.t01 | Wine grape | plastid | 73.77 | 64.93 |
HORVU3Hr1G047210.1 | Barley | cytosol | 16.77 | 61.29 |
VIT_13s0064g01480.t01 | Wine grape | plastid | 69.48 | 61.02 |
KRH29669 | Soybean | plastid | 66.46 | 58.49 |
KRG89883 | Soybean | cytosol, plastid | 62.55 | 57.74 |
PGSC0003DMT400081909 | Potato | plastid | 65.32 | 57.62 |
Solyc01g006540.2.1 | Tomato | plastid | 64.82 | 57.37 |
Solyc01g006560.2.1 | Tomato | plastid | 64.82 | 56.98 |
KRG89889 | Soybean | cytosol, plastid | 61.66 | 56.86 |
KRH29668 | Soybean | nucleus | 64.94 | 56.84 |
KRH24671 | Soybean | cytosol, plastid | 65.45 | 56.78 |
Solyc12g011040.1.1 | Tomato | nucleus, plastid | 63.05 | 56.05 |
KRG89888 | Soybean | nucleus | 63.68 | 55.92 |
GSMUA_Achr3P11780_001 | Banana | plastid | 59.02 | 55.32 |
KRH18682 | Soybean | cytosol, mitochondrion | 63.43 | 55.21 |
HORVU7Hr1G050680.1 | Barley | peroxisome | 47.54 | 55.12 |
KRH17965 | Soybean | plastid | 63.68 | 55.01 |
OQU80925 | Sorghum | cytosol | 58.64 | 53.76 |
GSMUA_Achr9P12470_001 | Banana | plastid | 56.87 | 53.5 |
TraesCS7A01G034900.1 | Wheat | mitochondrion | 19.67 | 53.24 |
TraesCS7D01G029400.1 | Wheat | cytosol | 17.65 | 52.83 |
TraesCS6B01G014400.1 | Wheat | cytosol | 39.85 | 52.58 |
TraesCS4D01G347300.1 | Wheat | cytosol | 57.5 | 51.53 |
VIT_00s0265g00170.t01 | Wine grape | cytosol | 32.66 | 51.29 |
Os08t0508800-01 | Rice | nucleus, plasma membrane | 59.65 | 51.19 |
Os08t0509100-01 | Rice | nucleus | 59.77 | 50.37 |
Zm00001d053675_P001 | Maize | plastid | 57.25 | 50.17 |
HORVU6Hr1G033600.1 | Barley | plastid | 56.37 | 49.89 |
Zm00001d015852_P004 | Maize | plastid | 57.0 | 49.62 |
TraesCS7D01G244800.1 | Wheat | plastid | 57.88 | 49.25 |
TraesCS7B01G145200.1 | Wheat | plastid | 57.63 | 49.25 |
TraesCS6B01G193400.1 | Wheat | plastid | 55.86 | 49.17 |
TraesCS7A01G246200.1 | Wheat | plastid | 57.5 | 48.98 |
TraesCS6A01G166000.1 | Wheat | golgi | 55.49 | 48.83 |
TraesCS6D01G154600.1 | Wheat | plastid | 55.49 | 48.83 |
Os02t0194700-01 | Rice | plasma membrane | 57.0 | 48.81 |
KXG29701 | Sorghum | plastid | 55.99 | 48.42 |
Zm00001d031449_P001 | Maize | mitochondrion | 57.88 | 48.01 |
TraesCS5D01G013400.1 | Wheat | plastid | 55.23 | 47.2 |
HORVU5Hr1G001180.1 | Barley | plastid | 55.23 | 47.05 |
TraesCS5A01G007900.1 | Wheat | plastid | 54.98 | 46.98 |
TraesCS5B01G006500.1 | Wheat | plastid | 54.98 | 46.98 |
HORVU7Hr1G006320.4 | Barley | plastid | 53.34 | 45.63 |
Os12t0559200-01 | Rice | plastid | 52.96 | 45.55 |
TraesCS5D01G041100.1 | Wheat | plastid | 53.97 | 45.29 |
VIT_06s0004g01580.t01 | Wine grape | cytosol | 19.04 | 45.07 |
HORVU6Hr1G000510.1 | Barley | plastid | 52.96 | 45.06 |
TraesCS6D01G010100.1 | Wheat | plastid | 53.34 | 45.05 |
VIT_01s0010g02750.t01 | Wine grape | plastid | 52.08 | 44.89 |
Os12t0560200-00 | Rice | cytosol | 5.55 | 44.44 |
TraesCS5B01G033000.1 | Wheat | plastid | 53.09 | 44.32 |
VIT_14s0128g00780.t01 | Wine grape | cytosol | 45.78 | 42.26 |
VIT_14s0128g00790.t01 | Wine grape | cytosol | 45.65 | 41.66 |
VIT_09s0002g01080.t01 | Wine grape | cytosol | 48.42 | 41.42 |
VIT_05s0020g03170.t01 | Wine grape | cytosol | 45.4 | 41.1 |
TraesCS5A01G032800.1 | Wheat | mitochondrion | 43.76 | 40.4 |
VIT_07s0141g00340.t01 | Wine grape | cytosol, plastid | 29.89 | 37.15 |
VIT_07s0289g00010.t01 | Wine grape | cytosol | 21.44 | 35.64 |
Protein Annotations
Gene3D:1.20.245.10 | EntrezGene:100245031 | wikigene:100245031 | MapMan:11.7.1.2 | Gene3D:2.60.60.20 | Gene3D:3.10.450.60 |
Gene3D:4.10.372.10 | Gene3D:4.10.375.10 | ProteinID:CCB43748 | ProteinID:CCB43748.1 | UniProt:F6GUA6 | EMBL:FN594951 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006629 | GO:GO:0006633 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016702 |
GO:GO:0031408 | GO:GO:0046872 | GO:GO:0051213 | GO:GO:0055114 | InterPro:IPR001024 | InterPro:IPR013819 |
InterPro:IPR027433 | EntrezGene:LOC100245031 | wikigene:LOC100245031 | InterPro:LipOase | InterPro:LipOase_C | InterPro:LipOase_CS |
InterPro:LipOase_C_sf | InterPro:LipOase_Fe_BS | InterPro:LipOase_plant | InterPro:Lipoxygenase_dom_3 | PFAM:PF00305 | PFAM:PF01477 |
InterPro:PLAT/LH2_dom | InterPro:PLAT/LH2_dom_sf | PRINTS:PR00087 | PRINTS:PR00468 | ScanProsite:PS00081 | ScanProsite:PS00711 |
PFscan:PS50095 | PFscan:PS51393 | PANTHER:PTHR11771 | PANTHER:PTHR11771:SF89 | SMART:SM00308 | SUPFAM:SSF48484 |
SUPFAM:SSF49723 | UniParc:UPI000210894D | ArrayExpress:VIT_06s0004g01480 | EnsemblPlantsGene:VIT_06s0004g01480 | EnsemblPlants:VIT_06s0004g01480.t01 | unigene:Vvi.8708 |
RefSeq:XP_002283135 | RefSeq:XP_002283135.1 | : | : | : | : |
Description
Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:F6GUA6]
Coordinates
chr6:+:1828850..1850267
Molecular Weight (calculated)
90385.2 Da
IEP (calculated)
5.205
GRAVY (calculated)
-0.410
Length
793 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFHDINQET GLETRPISRY AHRVGQEDGD VIYESEFVIP GDFGEIGAVL VQNEYRSEMF LKYIVLNGLP NGPIAFNCGS WVQSKFDDPE KRIFFSNKSY
101: LPSQTPRGLK DLREKELANL RGNGEGERKT SDRIYDYDVY NDLGNPDSKS ELGRSVLGGN ENYPYPRRCR TGRAPCQTDP LSETRSGSFY VPRDEEFSEV
201: KEASFLTKTV DSVLHALKPS LETSLLDSNL GFPLFSDIDQ LYYQGITIPK LKNPGLLQRI LPRLVKAVSD AKDRLLKFET PAMFLKDKFS WLRDEEFSRQ
301: TLAGVNPYSI KLVMEWPLKS ALDPDVYGPP ESAITKELVE RGIKGFMTVD EALEQKKLFI IDYHDLLLPY VSKVRQIEGT TLYGSRALFF LTPDCTLKPL
401: AIELTRPPMD GKPQWKQVFT PGLEATDHWL WKFAKTHFLA HDSGYHELVS HWLRTHCATE PYVIATNRQL SVMHPIYKLL HPHLRYTMQI NALAREVLIN
501: ADGIIETSFS TRKYSMELSS AAYDQQWRFD REALPADLIN RGIAVEDPSA SHGLKLLIED YPFANDGLIL WDALKQWVAD YVNYYYKDAS MVQSDPELQA
601: WWTEIRTKGH EDKKDEPWWP VLQTPEDLIG IIATIAWVAS AHHSAVNFGQ YAFAAYFPNR PTIARTNMPS EDPTREGWKR FLDNPHFELL VCFPSQVQAT
701: KVIAILDVLS NHSPDEEYIG EYMEPAWGEE PDIKEAFERF SARLKELEVI IDARNADNSL KNRGGAGVVP YELLKPFSEA GVTGKGVPYS ISI
101: LPSQTPRGLK DLREKELANL RGNGEGERKT SDRIYDYDVY NDLGNPDSKS ELGRSVLGGN ENYPYPRRCR TGRAPCQTDP LSETRSGSFY VPRDEEFSEV
201: KEASFLTKTV DSVLHALKPS LETSLLDSNL GFPLFSDIDQ LYYQGITIPK LKNPGLLQRI LPRLVKAVSD AKDRLLKFET PAMFLKDKFS WLRDEEFSRQ
301: TLAGVNPYSI KLVMEWPLKS ALDPDVYGPP ESAITKELVE RGIKGFMTVD EALEQKKLFI IDYHDLLLPY VSKVRQIEGT TLYGSRALFF LTPDCTLKPL
401: AIELTRPPMD GKPQWKQVFT PGLEATDHWL WKFAKTHFLA HDSGYHELVS HWLRTHCATE PYVIATNRQL SVMHPIYKLL HPHLRYTMQI NALAREVLIN
501: ADGIIETSFS TRKYSMELSS AAYDQQWRFD REALPADLIN RGIAVEDPSA SHGLKLLIED YPFANDGLIL WDALKQWVAD YVNYYYKDAS MVQSDPELQA
601: WWTEIRTKGH EDKKDEPWWP VLQTPEDLIG IIATIAWVAS AHHSAVNFGQ YAFAAYFPNR PTIARTNMPS EDPTREGWKR FLDNPHFELL VCFPSQVQAT
701: KVIAILDVLS NHSPDEEYIG EYMEPAWGEE PDIKEAFERF SARLKELEVI IDARNADNSL KNRGGAGVVP YELLKPFSEA GVTGKGVPYS ISI
001: MYCRESLSSL QTLNVAKSLS SLFPKQSALI NPISAGRRNN LPRPNLRRRC KVTASRANIE QEGNTVKEPI QNIKVKGYIT AQEEFLEGIT WSRGLDDIAD
101: IRGRSLLVEL ISAKTDQRIT VEDYAQRVWA EAPDEKYECE FEMPEDFGPV GAIKIQNQYH RQLFLKGVEL KLPGGSITFT CESWVAPKSV DPTKRIFFSD
201: KSYLPSQTPE PLKKYRKEEL ETLQGKNREE VGEFTKFERI YDYDVYNDVG DPDNDPELAR PVIGGLTHPY PRRCKTGRKP CETDPSSEQR YGGEFYVPRD
301: EEFSTAKGTS FTGKAVLAAL PSIFPQIESV LLSPQEPFPH FKAIQNLFEE GIQLPKDAGL LPLLPRIIKA LGEAQDDILQ FDAPVLINRD RFSWLRDDEF
401: ARQTLAGLNP YSIQLVEEWP LISKLDPAVY GDPTSLITWE IVEREVKGNM TVDEALKNKR LFVLDYHDLL LPYVNKVREL NNTTLYASRT LFFLSDDSTL
501: RPVAIELTCP PNINKPQWKQ VFTPGYDATS CWLWNLAKTH AISHDAGYHQ LISHWLRTHA CTEPYIIAAN RQLSAMHPIY RLLHPHFRYT MEINARARQS
601: LVNGGGIIET CFWPGKYALE LSSAVYGKLW RFDQEGLPAD LIKRGLAEED KTAEHGVRLT IPDYPFANDG LILWDAIKEW VTDYVKHYYP DEELITSDEE
701: LQGWWSEVRN IGHGDKKDEP WWPVLKTQDD LIGVVTTIAW VTSGHHAAVN FGQYGYGGYF PNRPTTTRIR MPTEDPTDEA LKEFYESPEK VLLKTYPSQK
801: QATLVMVTLD LLSTHSPDEE YIGEQQEASW ANEPVINAAF ERFKGKLQYL EGVIDERNVN ITLKNRAGAG VVKYELLKPT SEHGVTGMGV PYSISI
101: IRGRSLLVEL ISAKTDQRIT VEDYAQRVWA EAPDEKYECE FEMPEDFGPV GAIKIQNQYH RQLFLKGVEL KLPGGSITFT CESWVAPKSV DPTKRIFFSD
201: KSYLPSQTPE PLKKYRKEEL ETLQGKNREE VGEFTKFERI YDYDVYNDVG DPDNDPELAR PVIGGLTHPY PRRCKTGRKP CETDPSSEQR YGGEFYVPRD
301: EEFSTAKGTS FTGKAVLAAL PSIFPQIESV LLSPQEPFPH FKAIQNLFEE GIQLPKDAGL LPLLPRIIKA LGEAQDDILQ FDAPVLINRD RFSWLRDDEF
401: ARQTLAGLNP YSIQLVEEWP LISKLDPAVY GDPTSLITWE IVEREVKGNM TVDEALKNKR LFVLDYHDLL LPYVNKVREL NNTTLYASRT LFFLSDDSTL
501: RPVAIELTCP PNINKPQWKQ VFTPGYDATS CWLWNLAKTH AISHDAGYHQ LISHWLRTHA CTEPYIIAAN RQLSAMHPIY RLLHPHFRYT MEINARARQS
601: LVNGGGIIET CFWPGKYALE LSSAVYGKLW RFDQEGLPAD LIKRGLAEED KTAEHGVRLT IPDYPFANDG LILWDAIKEW VTDYVKHYYP DEELITSDEE
701: LQGWWSEVRN IGHGDKKDEP WWPVLKTQDD LIGVVTTIAW VTSGHHAAVN FGQYGYGGYF PNRPTTTRIR MPTEDPTDEA LKEFYESPEK VLLKTYPSQK
801: QATLVMVTLD LLSTHSPDEE YIGEQQEASW ANEPVINAAF ERFKGKLQYL EGVIDERNVN ITLKNRAGAG VVKYELLKPT SEHGVTGMGV PYSISI
Arabidopsis Description
LOX2Lipoxygenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P38418]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.