Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- cytosol 2
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Os03t0262400-01 | |
Os10t0467600-01 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G45140.1 | Os03t0262400-01 | AT5G18110.1 | 11117257 |
AT3G45140.1 | Os10t0467600-01 | AT5G35620.1 | 11117257 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Os12t0559934-00 | Rice | cytosol | 21.15 | 100.0 |
Os12t0560200-00 | Rice | cytosol | 9.33 | 86.87 |
HORVU3Hr1G047210.1 | Barley | cytosol | 17.57 | 74.65 |
TraesCS7D01G029400.1 | Wheat | cytosol | 18.76 | 65.28 |
TraesCS6B01G014400.1 | Wheat | cytosol | 41.21 | 63.23 |
TraesCS7A01G034900.1 | Wheat | mitochondrion | 19.96 | 62.8 |
CDY61034 | Canola | cytosol | 29.61 | 61.07 |
TraesCS5D01G013400.1 | Wheat | plastid | 60.85 | 60.45 |
TraesCS5B01G006500.1 | Wheat | plastid | 60.85 | 60.45 |
TraesCS5A01G007900.1 | Wheat | plastid | 60.74 | 60.34 |
Solyc01g009680.2.1 | Tomato | plastid | 28.63 | 59.59 |
HORVU5Hr1G001180.1 | Barley | plastid | 60.09 | 59.51 |
HORVU6Hr1G000510.1 | Barley | plastid | 59.65 | 59.01 |
CDY07409 | Canola | cytosol | 24.73 | 58.91 |
CDY72550 | Canola | cytosol | 20.17 | 57.94 |
HORVU7Hr1G006320.4 | Barley | plastid | 58.13 | 57.82 |
VIT_13s0064g01500.t01 | Wine grape | cytosol | 15.62 | 57.6 |
TraesCS5B01G033000.1 | Wheat | plastid | 58.79 | 57.05 |
VIT_13s0064g01490.t01 | Wine grape | cytosol | 24.62 | 56.89 |
TraesCS6D01G010100.1 | Wheat | plastid | 57.7 | 56.66 |
TraesCS5D01G041100.1 | Wheat | plastid | 57.59 | 56.19 |
PGSC0003DMT400020118 | Potato | cytosol | 40.89 | 54.4 |
VIT_06s0004g01480.t01 | Wine grape | cytosol | 45.55 | 52.96 |
CDY61881 | Canola | cytosol | 20.17 | 52.39 |
VIT_06s0004g01460.t01 | Wine grape | plastid | 33.95 | 52.34 |
VIT_06s0004g01500.t01 | Wine grape | cytosol | 44.69 | 52.09 |
TraesCS5A01G032800.1 | Wheat | mitochondrion | 47.61 | 51.11 |
VIT_13s0064g01480.t01 | Wine grape | plastid | 49.02 | 50.06 |
Solyc01g006560.2.1 | Tomato | plastid | 47.83 | 48.89 |
Os02t0194700-01 | Rice | plasma membrane | 48.7 | 48.49 |
VIT_06s0004g01510.t01 | Wine grape | plastid | 47.07 | 48.17 |
KRG89883 | Soybean | cytosol, plastid | 44.79 | 48.08 |
KRH24671 | Soybean | cytosol, plastid | 47.29 | 47.7 |
KRH29668 | Soybean | nucleus | 46.85 | 47.68 |
Os03t0700400-00 | Rice | cytosol, plasma membrane | 6.51 | 47.62 |
Solyc01g006540.2.1 | Tomato | plastid | 46.1 | 47.43 |
VIT_06s0004g01450.t01 | Wine grape | cytosol, extracellular | 44.14 | 47.38 |
VIT_06s0004g01470.t01 | Wine grape | cytosol | 46.31 | 47.29 |
KRH29669 | Soybean | plastid | 46.2 | 47.28 |
PGSC0003DMT400081909 | Potato | plastid | 46.1 | 47.27 |
CDY04196 | Canola | plastid | 45.55 | 47.24 |
KRH17965 | Soybean | plastid | 46.85 | 47.06 |
AT3G45140.1 | Thale cress | plastid | 45.55 | 46.88 |
CDX79416 | Canola | plastid | 45.77 | 46.68 |
CDX91565 | Canola | plastid | 45.55 | 46.67 |
KRG89889 | Soybean | cytosol, plastid | 43.49 | 46.63 |
CDX67920 | Canola | plastid | 45.55 | 46.46 |
Bra003526.1-P | Field mustard | plastid | 45.44 | 46.35 |
CDY61036 | Canola | plastid | 44.58 | 46.23 |
Os08t0508800-01 | Rice | nucleus, plasma membrane | 46.31 | 46.21 |
Solyc12g011040.1.1 | Tomato | nucleus, plastid | 44.69 | 46.19 |
Bra004060.1-P | Field mustard | plastid | 45.01 | 46.16 |
Bra004057.1-P | Field mustard | cytosol | 44.58 | 46.13 |
CDY16339 | Canola | plastid | 37.96 | 45.99 |
KRG89888 | Soybean | nucleus | 44.79 | 45.74 |
KRH18682 | Soybean | cytosol, mitochondrion | 45.01 | 45.55 |
Bra004059.1-P | Field mustard | plastid | 42.62 | 45.38 |
Os08t0509100-01 | Rice | nucleus | 46.1 | 45.16 |
CDY70843 | Canola | cytosol | 6.07 | 44.44 |
Os04t0447100-01 | Rice | cytosol | 38.07 | 44.1 |
Bra022535.1-P | Field mustard | plastid | 38.61 | 43.9 |
CDY61880 | Canola | plastid | 23.97 | 40.11 |
Os03t0179900-01 | Rice | plastid | 39.91 | 40.09 |
Os03t0699700-01 | Rice | cytosol, plastid | 36.98 | 39.51 |
Bra004058.1-P | Field mustard | plastid | 44.69 | 38.94 |
Os05t0304600-01 | Rice | plastid | 35.25 | 38.37 |
CDY07407 | Canola | cytosol, plastid | 45.23 | 38.01 |
Os03t0738600-01 | Rice | plasma membrane, plastid | 35.68 | 37.82 |
Os11t0575600-01 | Rice | mitochondrion | 35.14 | 37.33 |
Os03t0700700-01 | Rice | cytosol, plasma membrane, plastid | 35.36 | 37.17 |
CDY70245 | Canola | plastid | 16.59 | 33.41 |
CDY07408 | Canola | plastid | 16.16 | 32.53 |
CDY70606 | Canola | plastid | 13.12 | 30.63 |
CDY61882 | Canola | plastid | 11.82 | 28.17 |
Protein Annotations
Gene3D:1.20.245.10 | MapMan:11.7.1.2 | Gene3D:2.60.60.20 | Gene3D:3.10.450.60 | Gene3D:4.10.372.10 | Gene3D:4.10.375.10 |
EntrezGene:4352505 | ProteinID:ABA98917.2 | ProteinID:BAF30030.1 | ProteinID:BAT17627.1 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0006629 | GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 |
GO:GO:0009536 | GO:GO:0009987 | GO:GO:0010628 | GO:GO:0016165 | GO:GO:0016491 | GO:GO:0016702 |
GO:GO:0031408 | GO:GO:0046872 | GO:GO:0051213 | GO:GO:0055114 | InterPro:IPR001024 | InterPro:IPR013819 |
InterPro:IPR027433 | InterPro:LipOase | InterPro:LipOase_C | InterPro:LipOase_CS | InterPro:LipOase_C_sf | InterPro:LipOase_Fe_BS |
InterPro:LipOase_plant | InterPro:Lipoxygenase_dom_3 | EnsemblPlantsGene:Os12g0559200 | EnsemblPlants:Os12t0559200-01 | PFAM:PF00305 | InterPro:PLAT/LH2_dom |
InterPro:PLAT/LH2_dom_sf | PRINTS:PR00087 | PRINTS:PR00468 | ScanProsite:PS00081 | ScanProsite:PS00711 | PFscan:PS51393 |
PANTHER:PTHR11771 | PANTHER:PTHR11771:SF89 | UniProt:Q2QNN5 | SMART:SM00308 | SUPFAM:SSF48484 | SUPFAM:SSF49723 |
UniParc:UPI0000047565 | RefSeq:XP_015620637.1 | SEG:seg | : | : | : |
Description
LIPOXYGENASE 11Lipoxygenase (EC 1.13.11.12). (Os12t0559200-01);Similar to Lipoxygenase. (Os12t0559200-02)
Coordinates
chr12:-:22854749..22860198
Molecular Weight (calculated)
104693.0 Da
IEP (calculated)
6.224
GRAVY (calculated)
-0.494
Length
922 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTATQTLAP AVLSRSHGAP SSFSSQPRRT AAAASRVSCT RVGALSEVVN GELVVGDQEQ TTDDLLTRHK NVVADYTLSA TVTVSLKQDD STPQKVADMV
101: NRDWLFLDFF SSHIEGMHTE PQLARYSHMD GKGSFIYEAS FSIPSSLDAV GAVQVVNRYS SEVYISDIDV HLCGGRHQWT DITFHCNSWI DYNPNDQRFF
201: FPLKSYLPSQ TPRGVKNLRK EELRAIRGDG RGERKEWERI YDYDVYNDLG DPDNDPATRR PVLGGRGRPY PRRCRTGRRR CRTDPSSESP PAKDGAGIYV
301: PRDEAFTERK AGAFATKKAL SALSAFTTAQ RVSGDRRRGF PSLAAIDALY EDGYKNRPSS SQQEADNLEG YFREVLQKQV KLLLKGEKEE FKEELRKVFK
401: FQTPEIHDKD KLAWFRDEEF ARQTLAGMNP LSIQLVRDTD FPIFSKLDEE TYGPGDSLIT KELIEEQING VMTAEEAVEK KKLFMLDYHD VLLPFVHAVR
501: ELDDTTLYAS RTLFFLTEDG TLRPIAIELT RPKSPNTPQW RQVFTPGSSV AASWLWQLAK THVLAHDTGY HQLVSHWLRT HCCVEPYVIA ANRRLSQMHP
601: IYRLLHPHFR FTMEINAQAR GMLINANGII ESAFAPGKLC MELSSAVYDK FWRFDMEALP ADLIRRGMAI ECEDGKLELT IEDYPYANDG LLIWDSIKEW
701: VSDYVNHYYQ LASDIHMDKE LQGWWNEVRT KGHPDKEEGW PELNCHGSLV EVLTTIIWVA SGHHAAVNFG QYPYAGYFPN RPTIARRNMP TEGQACSHDG
801: MQPTFVEDPV RVLLDTFPSQ YQTTLVLPVL NLLSSHSPGE EYMGTHAESA WMADREVRAA FGRFNERMMS IAEMIDCRNK DPERKNRQGP GVVPYVLLKP
901: SYGDPKDMTS VMEMGIPNSI SI
101: NRDWLFLDFF SSHIEGMHTE PQLARYSHMD GKGSFIYEAS FSIPSSLDAV GAVQVVNRYS SEVYISDIDV HLCGGRHQWT DITFHCNSWI DYNPNDQRFF
201: FPLKSYLPSQ TPRGVKNLRK EELRAIRGDG RGERKEWERI YDYDVYNDLG DPDNDPATRR PVLGGRGRPY PRRCRTGRRR CRTDPSSESP PAKDGAGIYV
301: PRDEAFTERK AGAFATKKAL SALSAFTTAQ RVSGDRRRGF PSLAAIDALY EDGYKNRPSS SQQEADNLEG YFREVLQKQV KLLLKGEKEE FKEELRKVFK
401: FQTPEIHDKD KLAWFRDEEF ARQTLAGMNP LSIQLVRDTD FPIFSKLDEE TYGPGDSLIT KELIEEQING VMTAEEAVEK KKLFMLDYHD VLLPFVHAVR
501: ELDDTTLYAS RTLFFLTEDG TLRPIAIELT RPKSPNTPQW RQVFTPGSSV AASWLWQLAK THVLAHDTGY HQLVSHWLRT HCCVEPYVIA ANRRLSQMHP
601: IYRLLHPHFR FTMEINAQAR GMLINANGII ESAFAPGKLC MELSSAVYDK FWRFDMEALP ADLIRRGMAI ECEDGKLELT IEDYPYANDG LLIWDSIKEW
701: VSDYVNHYYQ LASDIHMDKE LQGWWNEVRT KGHPDKEEGW PELNCHGSLV EVLTTIIWVA SGHHAAVNFG QYPYAGYFPN RPTIARRNMP TEGQACSHDG
801: MQPTFVEDPV RVLLDTFPSQ YQTTLVLPVL NLLSSHSPGE EYMGTHAESA WMADREVRAA FGRFNERMMS IAEMIDCRNK DPERKNRQGP GVVPYVLLKP
901: SYGDPKDMTS VMEMGIPNSI SI
001: MYCRESLSSL QTLNVAKSLS SLFPKQSALI NPISAGRRNN LPRPNLRRRC KVTASRANIE QEGNTVKEPI QNIKVKGYIT AQEEFLEGIT WSRGLDDIAD
101: IRGRSLLVEL ISAKTDQRIT VEDYAQRVWA EAPDEKYECE FEMPEDFGPV GAIKIQNQYH RQLFLKGVEL KLPGGSITFT CESWVAPKSV DPTKRIFFSD
201: KSYLPSQTPE PLKKYRKEEL ETLQGKNREE VGEFTKFERI YDYDVYNDVG DPDNDPELAR PVIGGLTHPY PRRCKTGRKP CETDPSSEQR YGGEFYVPRD
301: EEFSTAKGTS FTGKAVLAAL PSIFPQIESV LLSPQEPFPH FKAIQNLFEE GIQLPKDAGL LPLLPRIIKA LGEAQDDILQ FDAPVLINRD RFSWLRDDEF
401: ARQTLAGLNP YSIQLVEEWP LISKLDPAVY GDPTSLITWE IVEREVKGNM TVDEALKNKR LFVLDYHDLL LPYVNKVREL NNTTLYASRT LFFLSDDSTL
501: RPVAIELTCP PNINKPQWKQ VFTPGYDATS CWLWNLAKTH AISHDAGYHQ LISHWLRTHA CTEPYIIAAN RQLSAMHPIY RLLHPHFRYT MEINARARQS
601: LVNGGGIIET CFWPGKYALE LSSAVYGKLW RFDQEGLPAD LIKRGLAEED KTAEHGVRLT IPDYPFANDG LILWDAIKEW VTDYVKHYYP DEELITSDEE
701: LQGWWSEVRN IGHGDKKDEP WWPVLKTQDD LIGVVTTIAW VTSGHHAAVN FGQYGYGGYF PNRPTTTRIR MPTEDPTDEA LKEFYESPEK VLLKTYPSQK
801: QATLVMVTLD LLSTHSPDEE YIGEQQEASW ANEPVINAAF ERFKGKLQYL EGVIDERNVN ITLKNRAGAG VVKYELLKPT SEHGVTGMGV PYSISI
101: IRGRSLLVEL ISAKTDQRIT VEDYAQRVWA EAPDEKYECE FEMPEDFGPV GAIKIQNQYH RQLFLKGVEL KLPGGSITFT CESWVAPKSV DPTKRIFFSD
201: KSYLPSQTPE PLKKYRKEEL ETLQGKNREE VGEFTKFERI YDYDVYNDVG DPDNDPELAR PVIGGLTHPY PRRCKTGRKP CETDPSSEQR YGGEFYVPRD
301: EEFSTAKGTS FTGKAVLAAL PSIFPQIESV LLSPQEPFPH FKAIQNLFEE GIQLPKDAGL LPLLPRIIKA LGEAQDDILQ FDAPVLINRD RFSWLRDDEF
401: ARQTLAGLNP YSIQLVEEWP LISKLDPAVY GDPTSLITWE IVEREVKGNM TVDEALKNKR LFVLDYHDLL LPYVNKVREL NNTTLYASRT LFFLSDDSTL
501: RPVAIELTCP PNINKPQWKQ VFTPGYDATS CWLWNLAKTH AISHDAGYHQ LISHWLRTHA CTEPYIIAAN RQLSAMHPIY RLLHPHFRYT MEINARARQS
601: LVNGGGIIET CFWPGKYALE LSSAVYGKLW RFDQEGLPAD LIKRGLAEED KTAEHGVRLT IPDYPFANDG LILWDAIKEW VTDYVKHYYP DEELITSDEE
701: LQGWWSEVRN IGHGDKKDEP WWPVLKTQDD LIGVVTTIAW VTSGHHAAVN FGQYGYGGYF PNRPTTTRIR MPTEDPTDEA LKEFYESPEK VLLKTYPSQK
801: QATLVMVTLD LLSTHSPDEE YIGEQQEASW ANEPVINAAF ERFKGKLQYL EGVIDERNVN ITLKNRAGAG VVKYELLKPT SEHGVTGMGV PYSISI
Arabidopsis Description
LOX2Lipoxygenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P38418]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.