Factsheet for GSMUA_AchrUn_randomP19710_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P24370_001	Banana	cytosol	94.64	87.6
GSMUA_AchrUn_...	Banana	cytosol	92.73	85.03
GSMUA_Achr6P25110_001	Banana	cytosol	65.69	64.86
CDY70916	Canola	cytosol	41.45	64.48
KRH35534	Soybean	cytosol	36.35	63.62
GSMUA_Achr6P25090_001	Banana	cytosol	67.6	63.25
GSMUA_Achr1P22970_001	Banana	cytosol	67.35	62.41
PGSC0003DMT400063654	Potato	cytosol	38.52	61.51
VIT_14s0128g00780.t01	Wine grape	cytosol	66.58	60.77
VIT_14s0128g00790.t01	Wine grape	cytosol	66.33	59.84
GSMUA_Achr9P19250_001	Banana	plasma membrane	72.45	59.73
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	63.78	58.0
PGSC0003DMT400028158	Potato	cytosol	63.65	57.89
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	63.52	57.84
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	63.27	57.67
PGSC0003DMT400054145	Potato	cytosol	62.76	57.34
KRH68548	Soybean	cytosol	62.5	57.11
GSMUA_Achr6P25080_001	Banana	cytosol	56.38	57.03
KRG91271	Soybean	cytosol	61.86	56.53
Bra021322.1-P	Field mustard	cytosol	61.61	56.36
KRH33939	Soybean	cytosol, endoplasmic reticulum	62.12	56.3
VIT_05s0020g03170.t01	Wine grape	cytosol	62.5	55.94
AT1G55020.1	Thale cress	cytosol	61.22	55.88
PGSC0003DMT400063469	Potato	cytosol	60.08	55.87
Solyc01g099180.2.1	Tomato	cytosol	60.84	55.85
PGSC0003DMT400063446	Potato	cytosol	57.27	55.85
Solyc01g099200.2.1	Tomato	cytosol, plastid	59.69	55.65
PGSC0003DMT400081370	Potato	cytosol	61.99	55.42
Solyc09g075860.2.1	Tomato	cytosol, nucleus	61.73	55.19
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	60.2	55.01
PGSC0003DMT400063461	Potato	cytosol	48.6	54.9
KRH23266	Soybean	cytosol	57.65	54.72
VIT_06s0004g01580.t01	Wine grape	cytosol	23.21	54.33
CDY38326	Canola	cytosol	61.35	54.23
KRH10050	Soybean	endoplasmic reticulum	59.06	54.03
CDY46325	Canola	cytosol	60.71	53.97
PGSC0003DMT400063452	Potato	cytosol	54.97	53.94
Solyc01g099210.2.1	Tomato	cytosol	59.31	53.88
PGSC0003DMT400063477	Potato	cytosol	58.8	53.86
Bra039948.1-P	Field mustard	cytosol	60.84	53.78
AT3G22400.1	Thale cress	cytosol	60.59	53.61
Solyc09g075870.1.1	Tomato	cytosol	58.16	53.4
KRH47522	Soybean	endoplasmic reticulum, nucleus	58.8	53.29
KRH16725	Soybean	cytosol	15.69	53.25
KRH44095	Soybean	endoplasmic reticulum	58.8	53.23
KRH47525	Soybean	endoplasmic reticulum	58.8	53.11
KRH44097	Soybean	cytosol, endoplasmic reticulum	58.67	53.0
KRH62399	Soybean	cytosol, endoplasmic reticulum	15.94	52.97
KRH44093	Soybean	endoplasmic reticulum	57.14	52.96
KRH10051	Soybean	endoplasmic reticulum, nucleus	57.78	52.92
KRH23265	Soybean	endoplasmic reticulum, nucleus	58.42	52.89
KRH44090	Soybean	endoplasmic reticulum	57.91	52.79
KRH10053	Soybean	endoplasmic reticulum	57.4	52.76
Bra023829.1-P	Field mustard	cytosol	60.59	52.6
CDY64191	Canola	cytosol	60.59	52.37
KRH23268	Soybean	endoplasmic reticulum	56.76	52.17
KRH23269	Soybean	endoplasmic reticulum	54.08	51.58
KRH47067	Soybean	endoplasmic reticulum	56.38	51.16
KRH47066	Soybean	endoplasmic reticulum, nucleus	55.99	51.11
KRH44094	Soybean	endoplasmic reticulum	56.38	50.98
KRH62403	Soybean	cytosol, endoplasmic reticulum	14.54	50.22
KRG88464	Soybean	cytosol	29.08	50.0
KRH57987	Soybean	cytosol	16.2	49.22
KRH47064	Soybean	endoplasmic reticulum	35.2	48.42
KRH44092	Soybean	nucleus	51.79	47.37
KRH47069	Soybean	endoplasmic reticulum	27.42	47.25
GSMUA_Achr2P05850_001	Banana	cytosol	48.72	46.42
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	28.7	44.03
KRH13357	Soybean	endoplasmic reticulum	13.52	43.8
CDY43490	Canola	cytosol, plasma membrane	61.61	40.15
GSMUA_Achr8P22700_001	Banana	plastid	43.37	40.09
Solyc01g099150.2.1	Tomato	nucleus	43.88	39.91
GSMUA_Achr9P16020_001	Banana	plastid	42.73	38.24
GSMUA_Achr3P07870_001	Banana	plastid	42.73	38.11
GSMUA_Achr3P11780_001	Banana	plastid	40.43	37.47
GSMUA_Achr10P...	Banana	cytosol	41.71	37.16
GSMUA_Achr9P12470_001	Banana	plastid	38.65	35.94
GSMUA_Achr6P28450_001	Banana	plastid	39.8	35.86
GSMUA_Achr6P25100_001	Banana	cytosol	55.1	3.6

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702
GO:GO:0031408	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	EnsemblPlantsGene:GSMUA_AchrUn_randomG19710_001	EnsemblPlants:GSMUA_AchrUn_randomP19710_001
EnsemblPlants:GSMUA_AchrUn_randomT19710_001	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C
InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	UniProt:M0UAN0	PFAM:PF00305
PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081
PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF53	SMART:SM00308	SUPFAM:SSF48484
SUPFAM:SSF49723	UniParc:UPI000296D65D	SEG:seg	:	:	:

Description

Lipoxygenase A [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG19710_001]

Coordinates

chrchrUn_random:+:94808468..94811697

Molecular Weight (calculated)

88165.8 Da

IEP (calculated)

7.421

GRAVY (calculated)

-0.256

Length

784 amino acids

Sequence
(BLAST)

001: MASHIVGEKV SGTVVLIRKT GLCFNYCGGT VIDNVLGRSI SFQLVSATVG DANNGNRGVV GEEAYLEQHI TSLPALAAGE TAYQVTFHCE EKNGIPGAVI
101: VKNNLSSEFF LKTLTLEDFP GKGRIHFVCN SWVYPAVKYK YDRVFFANTT YLPGDTPLPL KPYREEELCN LKGANVDGQL KEWDRVYRYD YYNDLGSPDT
201: CQDLARPILG GTPEHPYPRR GRTGRPPTKN DLKSESRLPL LNLNIYVPRD EQFGHLKMAD FLTYAFKGVV RVVLPLRQLV PFEMIRALQR VEGGRGLLKL
301: PMPQVIQVDK TAWRTDEEFT REMLAGLNPV VIRRLEEFPP TSKLDACKYG DHTSTITAAH IEHHLDGLTV HQALKQNKLF ILDHHDAYLP YLNRINALAV
401: KVYATRTLLY LRQDSTLKPL AIELSLPHQD GEQHGAVSKV YTPAESGVEG SIWQLAKAYA AVTDSGYHGL ISHWLNTHAV MEPFVIATHR HLSVIHPIHK
501: LLSPHYRDTM TINALARHAL IPAGGIFEMT VFPGRYALEL SSTVYKSWNF REQALPADLI KRGVAVKDRD DRLCLLIEDY PYAVDGLQIW HAIETWVGEY
601: CAIYYPTDDV VKADAELQAW WKETCTTIVW IGSALHAAIN FGQYPYAGYL PNRPTMSRRF MPEPGTPEYE ELKKNPDKVF LKTITSQLLT MLGLNTIEIL
701: SNHASDEVYL GQRDTPEWTS DERAVKAFER FGQRLKAIEA EIMKRNGDPS LKNRNGPVKM PYTLLFPSSG VGVTGRGIPN SISI

Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)

001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI

Arabidopsis Description

LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.