CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 26746009

msms PMID: 26746009 doi

S Chen, Y Luo, G Ding, F Xu

National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China. Electronic address: fangsenxu@mail.hzau.edu.cn., National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Agricultural Biotechnology of Liaoning Province, College of Biological Science and Technology, Shenyang Agricultural University, Shenyang 110866, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021322.1-P	Field mustard	cytosol	70.99	99.65
CDY70916	Canola	cytosol	41.31	98.61
AT1G55020.1	Thale cress	cytosol	65.92	92.32
VIT_14s0128g00780.t01	Wine grape	cytosol	52.78	73.92
VIT_14s0128g00790.t01	Wine grape	cytosol	51.87	71.81
KRH68548	Soybean	cytosol	50.62	70.98
VIT_06s0004g01580.t01	Wine grape	cytosol	19.62	70.45
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	49.71	69.37
PGSC0003DMT400028158	Potato	cytosol	49.63	69.26
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	49.46	69.11
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	48.46	67.79
PGSC0003DMT400063654	Potato	cytosol	27.51	67.41
PGSC0003DMT400063446	Potato	cytosol	44.89	67.16
KRH33939	Soybean	cytosol, endoplasmic reticulum	48.21	67.05
PGSC0003DMT400054145	Potato	cytosol	47.8	67.02
GSMUA_Achr1P22970_001	Banana	cytosol	45.89	65.25
Solyc01g099180.2.1	Tomato	cytosol	46.3	65.22
PGSC0003DMT400063461	Potato	cytosol	37.49	64.99
PGSC0003DMT400063452	Potato	cytosol	42.89	64.58
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	45.97	64.45
PGSC0003DMT400063469	Potato	cytosol	44.89	64.06
Solyc01g099200.2.1	Tomato	cytosol, plastid	44.72	63.97
GSMUA_AchrUn_...	Banana	cytosol	44.8	63.04
PGSC0003DMT400063477	Potato	cytosol	44.39	62.38
Solyc01g099210.2.1	Tomato	cytosol	44.72	62.34
Os03t0700400-00	Rice	cytosol, plasma membrane	6.48	61.9
GSMUA_AchrUn_...	Banana	cytosol	40.15	61.61
CDY46325	Canola	cytosol	44.97	61.34
CDY38326	Canola	cytosol	45.05	61.1
GSMUA_Achr1P24370_001	Banana	cytosol	42.81	60.8
GSMUA_Achr6P25110_001	Banana	cytosol	40.07	60.71
GSMUA_Achr6P25090_001	Banana	cytosol	41.9	60.14
CDY64191	Canola	cytosol	44.97	59.65
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	43.39	59.52
TraesCS4A01G359800.1	Wheat	cytosol	26.27	59.51
EER93611	Sorghum	cytosol	43.31	58.67
TraesCS4A01G275900.1	Wheat	cytosol, unclear	42.81	58.66
TraesCS4B01G037800.1	Wheat	cytosol	42.81	58.66
TraesCS4D01G035100.1	Wheat	cytosol	42.81	58.66
Zm00001d033623_P003	Maize	cytosol	42.23	58.59
EER93612	Sorghum	cytosol	42.14	58.55
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	42.73	58.54
Zm00001d033624_P001	Maize	cytosol	43.06	58.4
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	42.89	58.17
GSMUA_Achr9P19250_001	Banana	plasma membrane	45.8	57.94
TraesCS6D01G122000.1	Wheat	cytosol	14.8	57.42
TraesCS4A01G275800.1	Wheat	cytosol	11.39	57.32
TraesCS5B01G382300.1	Wheat	cytosol, unclear	41.15	57.29
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	41.15	57.29
TraesCS4B01G037700.3	Wheat	cytosol, golgi	40.9	57.14
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	40.9	57.14
Os03t0699700-01	Rice	cytosol, plastid	40.98	57.13
TraesCS5A01G378700.1	Wheat	cytosol	40.98	57.06
Os03t0738600-01	Rice	plasma membrane, plastid	41.23	57.01
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	40.9	56.94
TraesCS5A01G378800.2	Wheat	cytosol	36.82	56.94
TraesCS4D01G035200.1	Wheat	cytosol	39.07	56.69
EES04025	Sorghum	cytosol	40.65	56.34
HORVU5Hr1G093770.1	Barley	cytosol	40.4	56.32
TraesCS5B01G382400.1	Wheat	cytosol, golgi	40.07	56.31
KXG37783	Sorghum	cytosol	41.73	56.22
EES04028	Sorghum	cytosol	40.73	56.13
TraesCS5B01G382600.1	Wheat	cytosol	39.82	55.63
TraesCS3B01G602500.1	Wheat	cytosol	40.65	55.51
TraesCS5A01G378900.1	Wheat	cytosol	39.73	55.32
Zm00001d042541_P002	Maize	cytosol	40.65	55.32
Zm00001d042540_P008	Maize	cytosol	40.73	54.93
TraesCS6A01G132200.1	Wheat	mitochondrion	39.4	54.3
TraesCS6A01G132500.1	Wheat	mitochondrion	39.4	54.3
TraesCS6B01G160400.1	Wheat	mitochondrion	39.4	54.3
TraesCS3B01G605700.1	Wheat	cytosol	39.9	54.24
GSMUA_Achr6P25080_001	Banana	cytosol	34.91	54.19
TraesCS5D01G388800.1	Wheat	cytosol	39.9	53.51
TraesCS5A01G379000.1	Wheat	nucleus, unclear	34.25	53.51
TraesCS5D01G513100.1	Wheat	cytosol	38.49	53.34
HORVU5Hr1G117110.1	Barley	cytosol	39.15	53.1
Os11t0575600-01	Rice	mitochondrion	37.07	51.38
CDY72550	Canola	cytosol	13.63	51.09
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	20.62	50.82
TraesCS6B01G395700.1	Wheat	cytosol	34.0	50.37
CDY61034	Canola	cytosol	18.54	49.89
CDY07409	Canola	cytosol	15.88	49.35
TraesCS6D01G121900.1	Wheat	mitochondrion	18.2	48.99
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	20.62	48.53
Solyc01g099150.2.1	Tomato	nucleus	34.58	48.26
CDY61881	Canola	cytosol	13.55	45.92
CDY04196	Canola	plastid	30.76	41.62
CDY61036	Canola	plastid	30.67	41.51
CDY70843	Canola	cytosol	4.32	41.27
CDY64617	Canola	cytosol	31.42	41.13
CDX91565	Canola	plastid	30.67	41.0
CDX96769	Canola	cytosol	31.26	40.91
CDY16339	Canola	plastid	25.77	40.74
CDY21750	Canola	cytosol, mitochondrion, plastid	31.01	40.59
CDX79416	Canola	plastid	30.42	40.49
CDX81825	Canola	cytosol	30.92	40.48
CDX67920	Canola	plastid	30.34	40.38
CDY49853	Canola	plastid	30.76	40.26
CDY12655	Canola	plastid	30.34	39.98
CDX82146	Canola	plastid	28.1	39.76
CDY07417	Canola	plastid	30.34	39.76
CDY51606	Canola	plastid	29.93	39.43
CDY61880	Canola	plastid	16.54	36.12
CDY07407	Canola	cytosol, plastid	31.17	34.18
CDY70245	Canola	plastid	12.72	33.41
CDY07408	Canola	plastid	12.39	32.53
CDY28879	Canola	cytosol, endoplasmic reticulum, plastid	30.17	32.41
CDY70606	Canola	plastid	10.22	31.14
CDY61882	Canola	plastid	9.81	30.49
GSMUA_Achr6P25100_001	Banana	cytosol	34.0	3.41

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
GO:A0A078HY96	UniProt:A0A078HY96	EnsemblPlants:CDY43490	ProteinID:CDY43490	ProteinID:CDY43490.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408
GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00076771001	InterPro:IPR001024	InterPro:IPR013819
InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS
InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf
PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095	PFscan:PS51393
PANTHER:PTHR11771	PANTHER:PTHR11771:SF53	SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723	UniPathway:UPA00382
UniParc:UPI0004EECDEF	SEG:seg	:	:	:	:

Description

BnaA01g21450DLipoxygenase [Source:UniProtKB/TrEMBL;Acc:A0A078HY96]

Coordinates

chrLK032559:+:218192..226137

Molecular Weight (calculated)

137436.0 Da

IEP (calculated)

5.134

GRAVY (calculated)

-0.469

Length

1203 amino acids

Sequence
(BLAST)

0001: MIGDLVDLLT GGGGNAAKVK GTVVLMKKNV LDFNDFNASF LDRLHEFLGN KVTLRLISSD VTDPENGSNG KLGKAAHLED WITTITSLTA GESAFKVTFD
0101: YDQDFGYPGA FLIRNSHFSE FYLKSLTLED VPGHGRVHYI CNSWVYPAKR YTKDRVFFSN KTYLPHETPE ALLKYREEEL VSLRGTGEGE LKEWDRVYDY
0201: AYYNDLGVPP KNPRPVLGGS QEYPYPRRGR TGRKPTTEDP ETESRLPVTS SLDIYVPRDE RFGHLKMSDF LAYALKAIAQ IIQPALESVF DETPKEFDSF
0301: EDVLKIYEEG IDLPNQALID SIVKNIPLEM LKEIFRTDGQ KFLKYPVPQV IKEDKTAWRT DEEFAREMLA GLNPVVIQLL KMRVYNAVCL HKYINRIHTS
0401: FNSLIHCDLA ENGSNGKLGK AAHLEDWITT ITSLTAGESA FKVRIDYDQD FGYPGAFLIR NSHFSEFYLK SLTLEDVPGH GRVHYICNSW VYPAKRYTKD
0501: RVFFSNKTYL PHETPEPLLK YREEELVSLR GTGEGELKEW DRVYDYAYYN DLGVPPKNPR PVLGGSQEYP YPRRGRTGRK PTTEDPETES RLPVTSSLDI
0601: YVPRDERFGH LKMSDFLAYA LKAIAQIIQP ALESVFDETP KEFDSFEDVL KIYEEGIDLP NQALIDSIVK NIPLEMLKEI FRTDGQKFLK YPVPQVIKED
0701: KTAWRTDEEF AREMLAGLNP VVIQLLKEFP PKSKLERETY GDQNSTITKS HIEESLDGLT VEEALEKERL FILDHHDTLM PYLGRINTTG NKVYASRTLL
0801: FLKDDGTLKP LVIELSLPHP DGDSFGAVSE VYTPGEGVYD SLWQLAKAYV GVNDSGNHQL ISHWLQTHAS IEPFVIATNR QLSVLHPVFK LLEPHYRDTM
0901: NINALARQIL INGGGIFEIT VFPSKYAMEM SSFIYKNHWT FPDQALPAEL KKRGMAVEDP EAPHGLRLRI EDYPYAVDGL EVWYAIESWV QDYIPLYYKS
1001: DEDVQNDTEL QAWWKEVREE GHGDKKSEPW WPKLQTRKEL IDSCTIIIWV ASALHAAVNF GQYPIAGYLP NRPTISRQFM PKENTPEFEQ LEKNPDKVFL
1101: KTITAQLQTL LGISLIEILS THSSDEVYLG QRDSKEWAAE KEALEAFEKF GDKVKEIEKK IDERNLDENL KNRTGPVKMP YTSLFPTSEG GVTGRGIPNS
1201: VSI

Best Arabidopsis Sequence Match ( AT1G55020.1 )
(BLAST)

001: MFGELRDLLT GGGNETTTKK VKGTVVLMKK NVLDFNDFNA SFLDRLHEFL GNKITLRLVS SDVTDSENGS KGKLGKAAHL EDWITTITSL TAGESAFKVT
101: FDYETDFGYP GAFLIRNSHF SEFLLKSLTL EDVPGHGRVH YICNSWIYPA KHYTTDRVFF SNKTYLPHET PATLLKYREE ELVSLRGTGE GELKEWDRVY
201: DYAYYNDLGV PPKNPRPVLG GTQEYPYPRR GRTGRKPTKE DPQTESRLPI TSSLDIYVPR DERFGHLKMS DFLAYALKAI AQFIQPALEA VFDDTPKEFD
301: SFEDVLKIYE EGIDLPNQAL IDSIVKNIPL EMLKEIFRTD GQKFLKFPVP QVIKEDKTAW RTDEEFAREM LAGLNPVVIQ LLKEFPPKSK LDSESYGNQN
401: STITKSHIEH NLDGLTVEEA LEKERLFILD HHDTLMPYLG RVNTTTTKTY ASRTLLFLKD DGTLKPLVIE LSLPHPNGDK FGAVSEVYTP GEGVYDSLWQ
501: LAKAFVGVND SGNHQLISHW MQTHASIEPF VIATNRQLSV LHPVFKLLEP HFRDTMNINA LARQILINGG GIFEITVFPS KYAMEMSSFI YKNHWTFPDQ
601: ALPAELKKRG MAVEDPEAPH GLRLRIKDYP YAVDGLEVWY AIESWVRDYI FLFYKIEEDI QTDTELQAWW KEVREEGHGD KKSEPWWPKM QTREELVESC
701: TIIIWVASAL HAAVNFGQYP VAGYLPNRPT ISRQYMPKEN TPEFEELEKN PDKVFLKTIT AQLQTLLGIS LIEILSTHSS DEVYLGQRDS KEWAAEKEAL
801: EAFEKFGEKV KEIEKNIDER NDDETLKNRT GLVKMPYTLL FPSSEGGVTG RGIPNSVSI

Arabidopsis Description

LOX1Linoleate 9S-lipoxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06327]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.