CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008037.1-P	Field mustard	plastid	99.56	99.56
CDX82146	Canola	plastid	91.73	99.18
AT1G72520.1	Thale cress	plastid	92.06	91.36
CDY64617	Canola	cytosol	82.05	82.05
CDX81825	Canola	cytosol	81.83	81.83
CDY21750	Canola	cytosol, mitochondrion, plastid	81.61	81.61
CDX96769	Canola	cytosol	81.61	81.61
Solyc03g122340.2.1	Tomato	cytosol	71.06	71.92
PGSC0003DMT400058933	Potato	plastid	71.27	71.66
KRH06197	Soybean	nucleus	70.29	70.07
KRH47615	Soybean	nucleus	70.19	69.58
VIT_09s0002g01080.t01	Wine grape	cytosol	69.75	69.15
KRH69027	Soybean	plastid	67.46	68.81
KRG97300	Soybean	plastid	66.81	68.3
HORVU5Hr1G055110.2	Barley	mitochondrion	25.57	66.57
GSMUA_Achr9P16020_001	Banana	plastid	61.04	64.04
Os04t0447100-01	Rice	cytosol	55.06	63.57
GSMUA_Achr3P07870_001	Banana	plastid	60.61	63.37
GSMUA_Achr8P22700_001	Banana	plastid	57.89	62.74
GSMUA_Achr10P...	Banana	cytosol	59.74	62.39
Os03t0179900-01	Rice	plastid	60.94	61.0
EER95400	Sorghum	mitochondrion	61.04	60.71
TraesCS4B01G295200.1	Wheat	plastid	60.07	59.8
HORVU4Hr1G076570.6	Barley	cytosol, plastid	59.3	59.5
TraesCS4A01G009400.1	Wheat	plastid	59.41	59.15
TraesCS4D01G294100.1	Wheat	plastid	59.3	59.11
TraesCS2B01G333600.1	Wheat	plastid	58.87	59.0
TraesCS2D01G313400.1	Wheat	plastid	58.22	58.79
EES10882	Sorghum	plastid	58.11	57.79
TraesCS2A01G315100.2	Wheat	plastid	58.76	57.45
Zm00001d027893_P001	Maize	plastid	60.28	57.23
Zm00001d003533_P001	Maize	plastid	57.89	56.54
Zm00001d025524_P001	Maize	plastid	57.02	56.4
CDY07409	Canola	cytosol	22.52	53.49
CDY72550	Canola	cytosol	18.39	52.65
CDY61034	Canola	cytosol	25.57	52.57
CDY61881	Canola	cytosol	19.48	50.42
CDY70916	Canola	cytosol	26.88	49.01
CDY51606	Canola	plastid	47.77	48.08
CDY12655	Canola	plastid	47.77	48.08
CDY07417	Canola	plastid	47.44	47.49
CDY70843	Canola	cytosol	6.31	46.03
CDX91565	Canola	plastid	42.55	43.44
CDY04196	Canola	plastid	41.78	43.19
CDX67920	Canola	plastid	42.33	43.03
CDY16339	Canola	plastid	35.47	42.84
CDX79416	Canola	plastid	42.0	42.7
CDY61036	Canola	plastid	41.02	42.41
CDY46325	Canola	cytosol	39.61	41.27
CDY38326	Canola	cytosol	39.39	40.81
CDY64191	Canola	cytosol	39.61	40.13
CDY28879	Canola	cytosol, endoplasmic reticulum, plastid	47.33	38.84
CDY61880	Canola	plastid	21.87	36.48
CDY07407	Canola	cytosol, plastid	42.22	35.37
CDY70245	Canola	plastid	16.54	33.19
CDY07408	Canola	plastid	16.32	32.75
CDY70606	Canola	plastid	13.82	32.15
CDY61882	Canola	plastid	13.28	31.52
CDY43490	Canola	cytosol, plasma membrane	40.26	30.76

Protein Annotations

Gene3D:1.20.245.10	MapMan:11.7.1.2	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10
GO:A0A078ILA7	UniProt:A0A078ILA7	EnsemblPlants:CDY49853	ProteinID:CDY49853	ProteinID:CDY49853.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408
GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00093927001	InterPro:IPR001024	InterPro:IPR013819
InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS
InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf
PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095	PFscan:PS51393
PANTHER:PTHR11771	PANTHER:PTHR11771:SF67	SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723	UniPathway:UPA00382
UniParc:UPI0004EE7107	:	:	:	:	:

Description

BnaA02g16020DLipoxygenase [Source:UniProtKB/TrEMBL;Acc:A0A078ILA7]

Coordinates

chrLK032864:+:1912..5669

Molecular Weight (calculated)

103855.0 Da

IEP (calculated)

7.033

GRAVY (calculated)

-0.399

Length

919 amino acids

Sequence
(BLAST)

001: MALAKEIMGS RLIFERSSSL ASSPFQSRLS IKKKTQRTQV SINPFDLSPM KAAISGGVVA AISEDLVKTL RFKTLGRNQE NEEVEKAVQF KVRAVVTVRN
101: KNKEDFKETL VKHLDAFTDK IGRNVVLELI SIQVDPKTNE PKKSKPAVLK DWSKKSNSKA EKVHYAAEFT VDSAFGLPGA ITVTNKHQKE FFLENITIEG
201: FACGPVHFPC NSWVQSQNDH PSKRIFFTNQ PYLPSETPSG LRTLREQELE NLRGNGKGER KLSDRIYDFD VYNDIGNPDI STELARPVFG GREFPYPRRC
301: RTGRRSTDTD LMSERRVEKP LPMYVPRDEQ FEESKKNTFA ACRLKAVLHN LVPSLKASIL AEDFANFGEI DSLYKEGLLL KLGIQDDMFK KFPLPKIVTT
401: LQKSSEGLLR YDTPKIVSKD KYAWLRDDEF ARQAIAGINP VNIERVTTYP PVSNLDREIY GSHLDSALTE DHIIGHLDGL SVQQALETNR LFMVDYHDTY
501: LPFLDRINAL DGRKAYATRT ILFLTRLGTL KPVAIELSLP KSKRVVTPPI DATSHWTWQL AKAHVGSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAL
601: HPIYKLLDPH MRYTLEINAV ARQTLVSADG VIESCFTAGQ YGLEISAAAY KNQWRFDMEG LPADLIRRGM AVPDPTQPHG LKLLVEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYANPNLVK TDKELQAWYS ESINVGHADH RDADWWPELS TVDDLVSIIT TIVWLASAQH AALNFGQYPY GGYVPNRPPL MRQLIPDESE
801: PEFASFVEDP QKYFFSSLPS LLQTTKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV DAFYGFSAEI GRIEQEIEKR NKDPSRRNRC GAGVLPYELM
901: APSSEPGVTC RGVPNSVSI

Best Arabidopsis Sequence Match ( AT1G72520.1 )
(BLAST)

001: MALANEIMGS RLIFERSSSL ASPFHSRFSI KKKTQRTQFS INPFDPRPMR AVNSSGVVAA ISEDLVKTLR ISTVGRKQEK EEEEEKSVKF KVRAVATVRN
101: KNKEDFKETL VKHLDAFTDK IGRNVVLELM STQVDPKTNE PKKSKAAVLK DWSKKSNSKA ERVHYTAEFT VDSAFGSPGA ITVTNKHQKE FFLESITIEG
201: FACGPVHFPC NSWVQSQKDH PSKRILFTNQ PYLPSETPSG LRTLREKELE NLRGNGKGER KLSDRIYDYD VYNDIGNPDI SRELARPTLG GREFPYPRRC
301: RTGRSSTDTD MMSERRVEKP LPMYVPRDEQ FEESKQNTFA ACRLKAVLHN LIPSLKASIL AEDFANFGEI DSLYKEGLLL KLGFQDDMFK KFPLPKIVTT
401: LQKSSEGLLR YDTPKIVSKD KYAWLRDDEF ARQAIAGINP VNIERVTSYP PVSNLDPEIY GPGLHSALTE DHIIGQLDGL TVQQALETNR LFMVDYHDIY
501: LPFLDRINAL DGRKAYATRT ILFLTRLGTL KPIAIELSLP SQSSSNQKSK RVVTPPVDAT SNWMWQLAKA HVGSNDAGVH QLVNHWLRTH ACLEPFILAA
601: HRQLSAMHPI FKLLDPHMRY TLEINAVARQ TLISADGVIE SCFTAGQYGL EISSAAYKNK WRFDMEGLPA DLIRRGMAVP DPTQPHGLKL LVEDYPYAND
701: GLLLWSAIQT WVRTYVERYY ANSNLIQTDT ELQAWYSESI NVGHADHRDA EWWPKLSTVE DLVSVITTII WLASAQHAAL NFGQYPYGGY VPNRPPLMRR
801: LIPDESDPEF TSFIEDPQKY FFSSMPSLLQ TTKFMAVVDT LSTHSPDEEY IGERQQPSIW TGDAEIVDAF YGFSAEIGRI EKEIDKRNRD PSRRNRCGAG
901: VLPYELMAPS SEPGVTCRGV PNSVSI

Arabidopsis Description

LOX4Lipoxygenase 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FNX8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.