Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G17420.1 TraesCS4A01G137900.1 AT4G26630.1 25387881
AT1G17420.1 TraesCS4B01G148100.1 AT4G26630.1 25387881
AT1G17420.1 TraesCS4D01G153300.1 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G333600.1 Wheat plastid 98.35 97.6
TraesCS2A01G315100.2 Wheat plastid 97.91 94.79
Os04t0447100-01 Rice cytosol 77.91 89.07
EES10882 Sorghum plastid 86.48 85.17
Zm00001d003533_P001 Maize plastid 85.82 83.0
Zm00001d025524_P001 Maize plastid 83.96 82.24
GSMUA_Achr3P07870_001 Banana plastid 68.79 71.22
GSMUA_Achr8P22700_001 Banana plastid 66.26 71.11
GSMUA_Achr9P16020_001 Banana plastid 68.35 71.0
VIT_00s0265g00170.t01 Wine grape cytosol 36.92 66.53
TraesCS4D01G294100.1 Wheat plastid 63.52 62.69
CDY21750 Canola cytosol, mitochondrion, plastid 61.87 61.26
Bra030988.1-P Field mustard cytosol, mitochondrion, plastid 61.54 60.94
AT1G17420.1 Thale cress cytosol, plastid 61.43 60.83
CDX81825 Canola cytosol 61.32 60.72
CDY64617 Canola cytosol 61.21 60.61
CDX96769 Canola cytosol 61.1 60.5
Bra016602.1-P Field mustard cytosol 60.88 60.28
VIT_09s0002g01080.t01 Wine grape cytosol 60.88 59.76
Solyc03g122340.2.1 Tomato cytosol 59.56 59.69
PGSC0003DMT400058933 Potato plastid 59.23 58.97
AT1G72520.1 Thale cress plastid 59.56 58.53
CDX82146 Canola plastid 54.62 58.47
Bra008037.1-P Field mustard plastid 58.9 58.32
KRH06197 Soybean nucleus 59.01 58.24
CDY49853 Canola plastid 58.79 58.22
KRG97300 Soybean plastid 57.47 58.18
KRH69027 Soybean plastid 57.58 58.16
KRH47615 Soybean nucleus 59.23 58.14
KRH10882 Soybean cytosol 24.18 50.69
KRH50048 Soybean cytosol 49.89 49.89
KRH21441 Soybean cytosol 47.91 47.91
TraesCS7D01G029400.1 Wheat cytosol 13.19 45.28
TraesCS4D01G347300.1 Wheat cytosol 41.43 42.6
TraesCS6D01G154600.1 Wheat plastid 42.09 42.51
TraesCS6D01G122000.1 Wheat cytosol 14.4 42.26
TraesCS7D01G244800.1 Wheat plastid 43.19 42.17
TraesCS4D01G035100.1 Wheat cytosol 40.11 41.57
TraesCS1D01G215800.2 Wheat cytosol 38.35 41.25
TraesCS4D01G035200.1 Wheat cytosol 37.47 41.13
TraesCS5D01G388700.1 Wheat cytosol, golgi, unclear 38.68 40.74
TraesCS5D01G013400.1 Wheat plastid 41.54 40.73
TraesCS5D01G041100.1 Wheat plastid 40.55 39.05
TraesCS5D01G513100.1 Wheat cytosol 36.92 38.71
TraesCS5D01G388800.1 Wheat cytosol 37.8 38.35
TraesCS6D01G010100.1 Wheat plastid 39.45 38.23
TraesCS6D01G121900.1 Wheat mitochondrion 17.58 35.79
TraesCS2D01G528500.1 Wheat mitochondrion, plastid 35.49 34.84
TraesCS2D01G528400.1 Wheat cytosol, mitochondrion 34.73 34.65
Protein Annotations
Gene3D:1.20.245.10MapMan:11.7.1.2Gene3D:2.60.60.20Gene3D:3.10.450.60Gene3D:4.10.372.10Gene3D:4.10.375.10
ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0016702GO:GO:0046872GO:GO:0055114InterPro:IPR001024
InterPro:IPR013819InterPro:IPR027433InterPro:LipOaseInterPro:LipOase_CInterPro:LipOase_CSInterPro:LipOase_C_sf
InterPro:LipOase_Fe_BSInterPro:LipOase_plantInterPro:Lipoxygenase_dom_3PFAM:PF00305PFAM:PF01477InterPro:PLAT/LH2_dom
InterPro:PLAT/LH2_dom_sfPRINTS:PR00087PRINTS:PR00468ScanProsite:PS00081ScanProsite:PS00711PFscan:PS50095
PFscan:PS51393PANTHER:PTHR11771PANTHER:PTHR11771:SF67SMART:SM00308SUPFAM:SSF48484SUPFAM:SSF49723
EnsemblPlantsGene:TraesCS2D01G313400EnsemblPlants:TraesCS2D01G313400.1TIGR:cd01751SEG:seg::
Description
No Description!
Coordinates
chr2D:+:403209523..403213354
Molecular Weight (calculated)
101760.0 Da
IEP (calculated)
6.999
GRAVY (calculated)
-0.377
Length
910 amino acids
Sequence
(BLAST)
001: MELLGRSLLQ AGSASTAAPR GGRERAGGGL CFASLGGRPS RRTVRSKAPV GALAERVVLT PAPAERVARP EAHPQSVAAR AVVTVRRKRK VEVKEQVAEQ
101: MDAYADRVGR SVLLELISTE TDPRKGGPKK SRKSRLVGWF EKRDVKAELV VYTAGFTVDA AFGEPGAVTV LNRHQREFFI ESILVEGFPS GPAHFTCNSW
201: VQPTRVDPTP RVFFTNKPYL PSKTPPGLRE LRRRELKELR GSGTGVRKTT HRAYDYDVYN DLGNPDKGAG FERPVLGGDK LPYPRRMRTA RPSTVTDEGA
301: ESRVEYPEPI YVSRDEEFEE GKNEMLSEGA IKALLHNFMP LLVSSVSPDS RDFAGFHDVD NLFKEGLRLK QALHDQLFQK IPFVRKIQEN SEGLLRYDTP
401: DIIKKDKFAW LRDDEFARQA LAGINPVNIQ RLQVFPPVSR LDPAVYGPPE SAITEEHIIG NLDGMSVQQA LEENKLYMLD YHDIFMPFLD RINSLDGRKA
501: YGTRTLFFLT AGGTLKPIAI ELCLPPMTDD CKRAKRVFTP PADATSIWLW QLAKAHVCSN DAGVHQLINH WLRTHACMEP FIIAAHRQMS AMHPIFKLLK
601: PHMRYTLKIN ALARQILING DGVIESGFTP GRYCMEMSSF AYDNLWRLDQ EGLPADLIRR GMAVEDASQP HGLRLLIEDY PYATDGLLLW SAIARWCEAY
701: VAAYYPSDEA VQDDYELQSW YTEAVQVGHP DKCDAPWWPR LTTAGDLASL LTTLVWLCSA QHAALNFGQY PLGGYIPNRP PLMRRLVPAE GDPEYEHLVA
801: DPHRFYLSAL PSLTQTTTFM TVIDTLSTHS ADEQYLGERP NEEWTADPAA LAAAQEFAAE VRRAEEEIER RNADPARRNR CGAGVLPYEL MAPSSGPGIT
901: CRGVPNSVTI
Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)
001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
Arabidopsis Description
LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.