Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 4
  • mitochondrion 1
  • nucleus 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX81825 Canola cytosol 92.6 92.6
CDY21750 Canola cytosol, mitochondrion, plastid 92.6 92.6
Bra030988.1-P Field mustard cytosol, mitochondrion, plastid 92.38 92.38
CDX96769 Canola cytosol 91.19 91.19
CDY64617 Canola cytosol 91.19 91.19
Bra016602.1-P Field mustard cytosol 90.86 90.86
AT1G72520.1 Thale cress plastid 84.11 83.48
Solyc03g122340.2.1 Tomato cytosol 72.8 73.68
PGSC0003DMT400058933 Potato plastid 72.47 72.87
KRH06197 Soybean nucleus 72.58 72.34
KRH47615 Soybean nucleus 72.25 71.63
VIT_09s0002g01080.t01 Wine grape cytosol 71.06 70.44
KRH69027 Soybean plastid 68.55 69.92
KRG97300 Soybean plastid 68.23 69.74
HORVU5Hr1G055110.2 Barley mitochondrion 26.12 67.99
Os04t0447100-01 Rice cytosol 56.8 65.58
GSMUA_Achr9P16020_001 Banana plastid 62.13 65.18
GSMUA_Achr3P07870_001 Banana plastid 62.02 64.85
GSMUA_Achr8P22700_001 Banana plastid 59.3 64.27
GSMUA_Achr10P... Banana cytosol 61.48 64.2
Os03t0179900-01 Rice plastid 63.77 63.83
EER95400 Sorghum mitochondrion 63.0 62.66
TraesCS4B01G295200.1 Wheat plastid 61.81 61.54
TraesCS2B01G333600.1 Wheat plastid 61.37 61.5
HORVU4Hr1G076570.6 Barley cytosol, plastid 61.26 61.46
TraesCS2D01G313400.1 Wheat plastid 60.83 61.43
TraesCS4D01G294100.1 Wheat plastid 61.37 61.17
TraesCS4A01G009400.1 Wheat plastid 61.15 60.89
EES10882 Sorghum plastid 60.28 59.96
TraesCS2A01G315100.2 Wheat plastid 61.15 59.79
Zm00001d027893_P001 Maize plastid 62.68 59.5
Zm00001d003533_P001 Maize plastid 59.85 58.45
Zm00001d025524_P001 Maize plastid 58.87 58.23
AT1G67560.1 Thale cress plastid 48.53 48.64
AT3G45140.1 Thale cress plastid 41.78 42.86
AT1G55020.1 Thale cress cytosol 40.04 42.84
AT3G22400.1 Thale cress cytosol 40.81 42.33
Protein Annotations
Gene3D:1.20.245.10MapMan:11.7.1.2Gene3D:2.60.60.20Gene3D:3.10.450.60Gene3D:4.10.372.10Gene3D:4.10.375.10
EntrezGene:838314ProteinID:AAF79461.1ProteinID:AAF97315.1ProteinID:AEE29585.1EMBL:AJ249794ArrayExpress:AT1G17420
EnsemblPlantsGene:AT1G17420RefSeq:AT1G17420TAIR:AT1G17420RefSeq:AT1G17420-TAIR-GEnsemblPlants:AT1G17420.1TAIR:AT1G17420.1
EMBL:AY075625Unigene:At.20467EMBL:BT006348GO:GO:0000003GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0006629GO:GO:0006631GO:GO:0006633GO:GO:0006950GO:GO:0007275GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009507GO:GO:0009536GO:GO:0009555GO:GO:0009605
GO:GO:0009607GO:GO:0009611GO:GO:0009620GO:GO:0009628GO:GO:0009644GO:GO:0009719
GO:GO:0009753GO:GO:0009791GO:GO:0009901GO:GO:0009908GO:GO:0009987GO:GO:0016165
GO:GO:0016491GO:GO:0016702GO:GO:0031408GO:GO:0034440GO:GO:0046872GO:GO:0048653
GO:GO:0051213GO:GO:0055114GO:GO:0080086InterPro:IPR001024InterPro:IPR013819InterPro:IPR027433
Symbol:LOX3InterPro:LipOaseInterPro:LipOase_CInterPro:LipOase_CSInterPro:LipOase_C_sfInterPro:LipOase_Fe_BS
InterPro:LipOase_plantInterPro:Lipoxygenase_dom_3RefSeq:NP_564021.1PFAM:PF00305PFAM:PF01477InterPro:PLAT/LH2_dom
InterPro:PLAT/LH2_dom_sfPO:PO:0000013PO:PO:0000016PO:PO:0000037PO:PO:0000293PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281
PRINTS:PR00087PRINTS:PR00468ScanProsite:PS00081ScanProsite:PS00711PFscan:PS50095PFscan:PS51393
PANTHER:PTHR11771PANTHER:PTHR11771:SF67UniProt:Q9LNR3SMART:SM00308SUPFAM:SSF48484SUPFAM:SSF49723
UniParc:UPI00000A3E24SEG:seg::::
Description
LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
Coordinates
chr1:+:5977323..5981521
Molecular Weight (calculated)
103732.0 Da
IEP (calculated)
8.012
GRAVY (calculated)
-0.434
Length
919 amino acids
Sequence
(BLAST)
001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.