Factsheet for AT3G22400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039948.1-P	Field mustard	cytosol	92.21	92.11
CDY46325	Canola	cytosol	91.2	91.61
CDY38326	Canola	cytosol	91.2	91.09
Bra023829.1-P	Field mustard	cytosol	92.33	90.59
CDY64191	Canola	cytosol	91.99	89.86
KRH35534	Soybean	cytosol	36.79	72.77
KRG91271	Soybean	cytosol	66.03	68.18
VIT_05s0020g03170.t01	Wine grape	cytosol	66.37	67.12
PGSC0003DMT400081370	Potato	cytosol	65.91	66.59
Solyc09g075860.2.1	Tomato	cytosol, nucleus	65.69	66.36
GSMUA_Achr1P22970_001	Banana	cytosol	61.4	64.3
Solyc09g075870.1.1	Tomato	cytosol	60.95	63.23
AT1G55020.1	Thale cress	cytosol	60.72	62.63
KRG88464	Soybean	cytosol	32.17	62.5
TraesCS4A01G275800.1	Wheat	cytosol	16.7	61.92
TraesCS4A01G359800.1	Wheat	cytosol	36.57	61.02
GSMUA_AchrUn_...	Banana	cytosol	53.61	60.59
Os03t0700400-00	Rice	cytosol, plasma membrane	8.58	60.32
GSMUA_Achr1P24370_001	Banana	cytosol	57.56	60.21
TraesCS6D01G122000.1	Wheat	cytosol	20.88	59.68
GSMUA_AchrUn_...	Banana	cytosol	57.34	59.42
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	57.79	58.38
Os03t0699700-01	Rice	cytosol, plastid	55.42	56.89
TraesCS4B01G037800.1	Wheat	cytosol	56.21	56.72
EER93612	Sorghum	cytosol	55.42	56.7
GSMUA_Achr6P25090_001	Banana	cytosol	53.5	56.56
EER93611	Sorghum	cytosol	56.66	56.53
TraesCS4A01G275900.1	Wheat	cytosol, unclear	55.87	56.38
Zm00001d033624_P001	Maize	cytosol	56.43	56.37
Zm00001d033623_P003	Maize	cytosol	55.08	56.29
GSMUA_Achr6P25110_001	Banana	cytosol	50.34	56.17
TraesCS4D01G035100.1	Wheat	cytosol	55.64	56.15
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	56.21	56.14
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	55.19	55.69
Os03t0738600-01	Rice	plasma membrane, plastid	54.51	55.52
GSMUA_Achr9P19250_001	Banana	plasma membrane	59.48	55.42
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	53.84	55.4
TraesCS4B01G037700.3	Wheat	cytosol, golgi	53.5	55.05
TraesCS4D01G035200.1	Wheat	cytosol	51.35	54.89
TraesCS5B01G382300.1	Wheat	cytosol, unclear	53.27	54.63
TraesCS5A01G378800.2	Wheat	cytosol	47.97	54.63
KXG37783	Sorghum	cytosol	54.97	54.54
TraesCS5A01G378700.1	Wheat	cytosol	53.05	54.4
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	53.05	54.4
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	53.05	54.4
TraesCS3B01G602500.1	Wheat	cytosol	54.06	54.37
EES04025	Sorghum	cytosol	53.16	54.26
Zm00001d042541_P002	Maize	cytosol	53.95	54.07
TraesCS3B01G605700.1	Wheat	cytosol	53.84	53.9
TraesCS5B01G382400.1	Wheat	cytosol, golgi	52.03	53.86
HORVU5Hr1G093770.1	Barley	cytosol	52.26	53.65
EES04028	Sorghum	cytosol	52.48	53.26
TraesCS5B01G382600.1	Wheat	cytosol	51.58	53.08
TraesCS5A01G378900.1	Wheat	cytosol	51.69	53.01
TraesCS6B01G160400.1	Wheat	mitochondrion	52.03	52.81
TraesCS6A01G132200.1	Wheat	mitochondrion	51.92	52.69
TraesCS6A01G132500.1	Wheat	mitochondrion	51.92	52.69
Zm00001d042540_P008	Maize	cytosol	52.48	52.13
TraesCS5A01G379000.1	Wheat	nucleus, unclear	44.92	51.69
TraesCS5D01G388800.1	Wheat	cytosol	51.92	51.28
TraesCS5D01G513100.1	Wheat	cytosol	50.11	51.15
Os11t0575600-01	Rice	mitochondrion	49.89	50.92
HORVU5Hr1G117110.1	Barley	cytosol	50.79	50.73
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	27.88	50.61
GSMUA_Achr6P25080_001	Banana	cytosol	44.24	50.58
TraesCS6B01G395700.1	Wheat	cytosol	44.81	48.89
TraesCS6D01G121900.1	Wheat	mitochondrion	22.01	43.62
AT1G17420.1	Thale cress	cytosol, plastid	42.33	40.81
AT1G72520.1	Thale cress	plastid	41.99	40.17
AT3G45140.1	Thale cress	plastid	39.73	39.29
AT1G67560.1	Thale cress	plastid	38.94	37.62
GSMUA_Achr6P25100_001	Banana	cytosol	44.02	3.25

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
EntrezGene:821808	ProteinID:AEE76630.1	EMBL:AJ302043	ArrayExpress:AT3G22400	EnsemblPlantsGene:AT3G22400	RefSeq:AT3G22400
TAIR:AT3G22400	RefSeq:AT3G22400-TAIR-G	EnsemblPlants:AT3G22400.1	TAIR:AT3G22400.1	Unigene:At.37889	ProteinID:BAB01777.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0006631	GO:GO:0006633	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009605	GO:GO:0009607	GO:GO:0009653	GO:GO:0009791	GO:GO:0009987	GO:GO:0010311
GO:GO:0016491	GO:GO:0016702	GO:GO:0031408	GO:GO:0034440	GO:GO:0046872	GO:GO:0048364
GO:GO:0051213	GO:GO:0055114	GO:GO:1900366	GO:GO:1990136	InterPro:IPR001024	InterPro:IPR013819
InterPro:IPR027433	Symbol:LOX5	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf
InterPro:LipOase_Fe_BS	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	RefSeq:NP_188879.2	PFAM:PF00305	PFAM:PF01477
InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PO:PO:0000013	PO:PO:0000016	PO:PO:0000037	PO:PO:0000084
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711
PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF53	UniProt:Q9LUW0	SMART:SM00308
SUPFAM:SSF48484	SUPFAM:SSF49723	UniParc:UPI0000196DAC	SEG:seg	:	:

Description

LOX5Linoleate 9S-lipoxygenase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW0]

Coordinates

chr3:+:7926728..7931351

Molecular Weight (calculated)

101065.0 Da

IEP (calculated)

6.603

GRAVY (calculated)

-0.469

Length

886 amino acids

Sequence
(BLAST)

001: MIHTDIAEIL CVKPKTTKKT KTMEEDVKKT TTMKIEGEVV VMKKNLLDFK DVMASLLDRV NELLGRRVSL HLISSHQPDP ANEKRGRLGK AAHLEKWVTK
101: IKTSVTAEET AFGVTFDWDE SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS NKAYLPSETP ELIKELREEE
201: LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK
301: SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV
401: ISRLQEFPPK SCLDSAKYGN QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL QADGTLKPLA IELSLPHAQG
501: ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV
601: FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH
701: GDKRHESWWP SMQTRDDLIE TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT ITPQLQTLLG ISIIEILSMH
801: STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.