Factsheet for TraesCS5D01G388800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G382600.1	Wheat	cytosol	94.43	98.37
TraesCS5A01G378900.1	Wheat	cytosol	93.42	96.99
HORVU5Hr1G093770.1	Barley	cytosol	91.3	94.9
TraesCS5A01G379000.1	Wheat	nucleus, unclear	80.04	93.25
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	79.71	82.75
Os03t0738600-01	Rice	plasma membrane, plastid	74.02	76.32
EES04025	Sorghum	cytosol	71.35	73.73
Zm00001d042541_P002	Maize	cytosol	72.02	73.08
EES04028	Sorghum	cytosol	70.23	72.16
TraesCS4D01G035200.1	Wheat	cytosol	66.67	72.14
TraesCS5D01G513100.1	Wheat	cytosol	68.34	70.62
Zm00001d042540_P008	Maize	cytosol	69.79	70.18
TraesCS6D01G122000.1	Wheat	cytosol	22.63	65.48
KRH35534	Soybean	cytosol	31.1	62.28
TraesCS4D01G035100.1	Wheat	cytosol	60.65	61.96
KRH16725	Soybean	cytosol	15.83	61.47
CDY70916	Canola	cytosol	33.89	60.32
PGSC0003DMT400063654	Potato	cytosol	32.78	59.88
KRH62399	Soybean	cytosol, endoplasmic reticulum	15.72	59.75
GSMUA_Achr1P22970_001	Banana	cytosol	55.85	59.22
VIT_14s0128g00780.t01	Wine grape	cytosol	56.19	58.67
KRH57987	Soybean	cytosol	16.83	58.53
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	55.74	58.0
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	55.63	57.96
KRH62403	Soybean	cytosol, endoplasmic reticulum	14.6	57.71
PGSC0003DMT400028158	Potato	cytosol	55.41	57.66
PGSC0003DMT400054145	Potato	cytosol	54.74	57.23
PGSC0003DMT400063446	Potato	cytosol	51.28	57.21
VIT_14s0128g00790.t01	Wine grape	cytosol	55.41	57.19
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	54.52	56.86
Solyc01g099180.2.1	Tomato	cytosol	53.51	56.21
Bra021322.1-P	Field mustard	cytosol	53.51	56.01
KRH68548	Soybean	cytosol	53.51	55.94
PGSC0003DMT400063477	Potato	cytosol	53.29	55.84
PGSC0003DMT400063461	Potato	cytosol	43.03	55.62
KRG91271	Soybean	cytosol	53.18	55.59
Solyc01g099210.2.1	Tomato	cytosol	53.18	55.27
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	52.73	55.13
AT1G55020.1	Thale cress	cytosol	52.73	55.06
TraesCS6D01G121900.1	Wheat	mitochondrion	27.42	55.03
Solyc09g075860.2.1	Tomato	cytosol, nucleus	53.73	54.96
KRH10050	Soybean	endoplasmic reticulum	52.51	54.96
PGSC0003DMT400081370	Potato	cytosol	53.62	54.85
Solyc01g099200.2.1	Tomato	cytosol, plastid	51.39	54.82
KRH33939	Soybean	cytosol, endoplasmic reticulum	52.62	54.57
PGSC0003DMT400063469	Potato	cytosol	51.06	54.33
KRH10051	Soybean	endoplasmic reticulum, nucleus	51.51	53.97
PGSC0003DMT400063452	Potato	cytosol	48.05	53.94
KRH44095	Soybean	endoplasmic reticulum	51.95	53.81
KRH23266	Soybean	cytosol	49.5	53.75
KRH23265	Soybean	endoplasmic reticulum, nucleus	51.73	53.58
KRH10053	Soybean	endoplasmic reticulum	50.95	53.58
VIT_05s0020g03170.t01	Wine grape	cytosol	52.29	53.54
KRH44093	Soybean	endoplasmic reticulum	50.28	53.31
KRH13357	Soybean	endoplasmic reticulum	14.38	53.31
KRH23268	Soybean	endoplasmic reticulum	50.39	52.99
KRH44097	Soybean	cytosol, endoplasmic reticulum	51.17	52.88
KRH47066	Soybean	endoplasmic reticulum, nucleus	50.5	52.74
Solyc09g075870.1.1	Tomato	cytosol	50.06	52.58
KRH47067	Soybean	endoplasmic reticulum	50.61	52.55
KRH44090	Soybean	endoplasmic reticulum	50.28	52.44
Bra039948.1-P	Field mustard	cytosol	51.73	52.31
KRH23269	Soybean	endoplasmic reticulum	47.83	52.19
KRH47522	Soybean	endoplasmic reticulum, nucleus	50.28	52.14
CDY46325	Canola	cytosol	51.17	52.04
CDY38326	Canola	cytosol	51.39	51.97
AT3G22400.1	Thale cress	cytosol	51.28	51.92
KRH44094	Soybean	endoplasmic reticulum	50.17	51.9
VIT_06s0004g01580.t01	Wine grape	cytosol	19.18	51.34
Bra023829.1-P	Field mustard	cytosol	51.28	50.94
CDY64191	Canola	cytosol	51.17	50.61
KRH47525	Soybean	endoplasmic reticulum	48.94	50.58
KRH47069	Soybean	endoplasmic reticulum	25.2	49.67
KRH44092	Soybean	nucleus	46.04	48.19
KRH47064	Soybean	endoplasmic reticulum	29.77	46.84
KRG88464	Soybean	cytosol	23.75	46.71
TraesCS7D01G029400.1	Wheat	cytosol	13.6	46.04
TraesCS1D01G215800.2	Wheat	cytosol	42.25	44.8
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	24.41	42.86
Solyc01g099150.2.1	Tomato	nucleus	39.35	40.95
CDY43490	Canola	cytosol, plasma membrane	53.51	39.9
TraesCS2D01G528400.1	Wheat	cytosol, mitochondrion	39.58	38.93
TraesCS4D01G347300.1	Wheat	cytosol	38.13	38.64
TraesCS2D01G528500.1	Wheat	mitochondrion, plastid	39.13	37.86
TraesCS2D01G313400.1	Wheat	plastid	38.35	37.8
TraesCS4D01G294100.1	Wheat	plastid	38.46	37.42
TraesCS6D01G154600.1	Wheat	plastid	37.24	37.07
TraesCS7D01G244800.1	Wheat	plastid	38.13	36.7
TraesCS5D01G013400.1	Wheat	plastid	37.79	36.53
TraesCS6D01G010100.1	Wheat	plastid	37.46	35.78
TraesCS5D01G041100.1	Wheat	plastid	37.12	35.24

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016702	GO:GO:0046872	GO:GO:0055114	InterPro:IPR001024	InterPro:IPR013819
InterPro:IPR027433	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS
InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf
PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095	PFscan:PS51393
PANTHER:PTHR11771	PANTHER:PTHR11771:SF54	SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723	EnsemblPlantsGene:TraesCS5D01G388800
EnsemblPlants:TraesCS5D01G388800.1	TIGR:cd01751	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:-:458179784..458183350

Molecular Weight (calculated)

100674.0 Da

IEP (calculated)

6.826

GRAVY (calculated)

-0.272

Length

897 amino acids

Sequence
(BLAST)

001: MFGGGLDIIG GLTGSKTRLK GSVVLTRKNA LDFNDLGATV MDNVTEFLGR GVTCQLISST IVDSSEHHRP PPLHHYSTYL PVQCNAMQCL TSLFVYVARL
101: DNGNRGKVGA EASLEQWITS LPFITVGENK FSVNFDWAVD KLGVPGAIIV KNNHASEFFL KTITLDNVPG HGKVVFVANS WVYPQAKYRY SRVFFANDTY
201: LPSKMPAALK PYRDDELRNL RGDDQQGPYE AHDRVYRYDV YHDLGDSRQI LGGSKEFPYP RRCRTGRKLS QTSPDRESRL LPLVQSIYVP RDELFGHLKK
301: SDFLGYSLKA LVEGIIPAIR TYVDLSPGEF DSFADILKLY EGGIKLPDIP ALQEMRKRFP LQLVKDLIPM GGDYLLKPPK PQVIKQDEKA WMTDAEFARE
401: ILAGVNPMMI TRVTEFPPKS TLDPSQYGDQ TSTITEAQIG SSLEGLTAQQ AVSSNRLYIL DHHDHMMPYL VRLNNLDDTF LYATRTLLFL KGDGTLAPVA
501: IELSTPLLQG GLTTAKSTVY TPASTGVEAW IWQLAKAYVC VNDYGYHQLV SHWLNTHAVM EPFIIATNRQ LSVTHPVHKL LHPHYRDTMN INSRARELLV
601: SAGGIIELTV FQRKYAMEMS SVTYKDWNFN EQALPDDLIK RGMAVPDPSS PHKVRLLLED YPYAVDGLAI WTAIEQWVTE YLAIYYTSDS VLQSDVELQA
701: WWKEVREVGH GDLKDAAWWP KMKTVAELVK ACATIIWTGS ALHAAVNFGQ YPYAGYHPNK PSASRRPMPE PDTEEYALLA RDPEKVFIRT ITNQMQAIIG
801: ISLLEILSKH SSDEIYLGQR DTPEWTSDAK ALEAFKRFGT RLEGIESQVV ALNGNPQLKN RNGPAQFPYM LLYPNTSDHT GKAEGLTARG IPNSISI

Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)

001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI

Arabidopsis Description

LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.