Factsheet for Solyc01g099170.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70916	Canola	cytosol	48.34	49.01
TraesCS4A01G275800.1	Wheat	cytosol	21.92	46.86
TraesCS6D01G122000.1	Wheat	cytosol	27.59	45.48
TraesCS4A01G359800.1	Wheat	cytosol	42.47	40.87
Solyc09g055900.2.1	Tomato	cytosol	35.42	39.18
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	36.2	37.91
PGSC0003DMT400063452	Potato	cytosol	58.9	37.67
Solyc01g009680.2.1	Tomato	plastid	32.09	37.02
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	60.67	35.96
Solyc01g099180.2.1	Tomato	cytosol	59.3	35.48
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	58.71	34.84
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	58.32	34.73
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	56.36	33.49
Solyc01g099200.2.1	Tomato	cytosol, plastid	52.84	32.1
VIT_14s0128g00780.t01	Wine grape	cytosol	53.03	31.55
VIT_14s0128g00790.t01	Wine grape	cytosol	52.84	31.07
KRH68548	Soybean	cytosol	50.49	30.07
KRH33939	Soybean	cytosol, endoplasmic reticulum	49.51	29.25
Bra021322.1-P	Field mustard	cytosol	48.73	29.05
GSMUA_AchrUn_...	Banana	cytosol	48.34	28.89
Solyc01g099210.2.1	Tomato	cytosol	48.53	28.74
GSMUA_AchrUn_...	Banana	cytosol	44.03	28.7
AT1G55020.1	Thale cress	cytosol	48.14	28.64
GSMUA_Achr1P24370_001	Banana	cytosol	47.36	28.57
TraesCS5A01G379000.1	Wheat	nucleus, unclear	42.66	28.31
Solyc09g075860.2.1	Tomato	cytosol, nucleus	48.53	28.28
GSMUA_Achr1P22970_001	Banana	cytosol	45.99	27.78
TraesCS5A01G378800.2	Wheat	cytosol	41.88	27.51
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	47.16	27.48
GSMUA_Achr6P25110_001	Banana	cytosol	42.66	27.46
Solyc09g075870.1.1	Tomato	cytosol	45.79	27.4
EER93611	Sorghum	cytosol	46.97	27.03
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	45.79	26.38
TraesCS6A01G132200.1	Wheat	mitochondrion	45.01	26.35
TraesCS6A01G132500.1	Wheat	mitochondrion	45.01	26.35
Os03t0699700-01	Rice	cytosol, plastid	44.42	26.3
GSMUA_Achr9P19250_001	Banana	plasma membrane	48.92	26.29
Zm00001d033624_P001	Maize	cytosol	45.6	26.27
TraesCS6B01G160400.1	Wheat	mitochondrion	44.62	26.12
TraesCS4D01G035100.1	Wheat	cytosol	44.81	26.08
TraesCS4A01G275900.1	Wheat	cytosol, unclear	44.81	26.08
GSMUA_Achr6P25090_001	Banana	cytosol	42.66	26.01
KXG37783	Sorghum	cytosol	45.21	25.87
EER93612	Sorghum	cytosol	43.84	25.87
TraesCS4B01G037800.1	Wheat	cytosol	44.42	25.85
TraesCS3B01G602500.1	Wheat	cytosol	44.42	25.77
Os03t0738600-01	Rice	plasma membrane, plastid	43.84	25.75
TraesCS3B01G605700.1	Wheat	cytosol	44.42	25.65
Zm00001d033623_P003	Maize	cytosol	43.44	25.61
TraesCS5B01G382600.1	Wheat	cytosol	43.05	25.55
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	43.84	25.51
TraesCS5D01G513100.1	Wheat	cytosol	43.25	25.46
HORVU5Hr1G093770.1	Barley	cytosol	42.86	25.38
TraesCS5A01G378900.1	Wheat	cytosol	42.86	25.35
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	42.66	25.23
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	42.66	25.23
EES04025	Sorghum	cytosol	42.86	25.23
TraesCS5B01G382400.1	Wheat	cytosol, golgi	42.07	25.12
TraesCS5B01G382300.1	Wheat	cytosol, unclear	42.47	25.12
Solyc01g099150.2.1	Tomato	nucleus	42.27	25.06
Zm00001d042541_P002	Maize	cytosol	43.05	24.89
TraesCS5A01G378700.1	Wheat	cytosol	42.07	24.88
EES04028	Sorghum	cytosol	42.27	24.74
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	41.49	24.62
HORVU5Hr1G117110.1	Barley	cytosol	42.66	24.58
TraesCS5D01G388800.1	Wheat	cytosol	42.86	24.41
Os11t0575600-01	Rice	mitochondrion	41.29	24.31
TraesCS4B01G037700.3	Wheat	cytosol, golgi	40.9	24.27
Zm00001d042540_P008	Maize	cytosol	41.88	23.99
TraesCS4D01G035200.1	Wheat	cytosol	37.57	23.16
CDY43490	Canola	cytosol, plasma membrane	48.53	20.62
TraesCS6B01G395700.1	Wheat	cytosol	32.68	20.57
Solyc01g006540.2.1	Tomato	plastid	34.05	19.42
Solyc05g014790.2.1	Tomato	plastid	34.05	19.1
Solyc03g122340.2.1	Tomato	cytosol	33.66	18.94
Solyc12g011040.1.1	Tomato	nucleus, plastid	32.49	18.61
Solyc01g006560.2.1	Tomato	plastid	32.49	18.4
GSMUA_Achr6P25080_001	Banana	cytosol	25.83	17.03
VIT_06s0004g01580.t01	Wine grape	cytosol	8.22	12.54
TraesCS6D01G121900.1	Wheat	mitochondrion	3.33	3.8
GSMUA_Achr6P25100_001	Banana	cytosol	26.03	1.11
Os03t0700400-00	Rice	cytosol, plasma membrane	0.2	0.79
Solyc09g055890.2.1	Tomato	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.245.10	Gene3D:3.10.450.60	MapMan:50.1.12	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016702	GO:GO:0046872
GO:GO:0051213	GO:GO:0055114	InterPro:IPR013819	UniProt:K4B0V4	InterPro:LipOase	InterPro:LipOase_C
InterPro:LipOase_CS	InterPro:LipOase_C_sf	PFAM:PF00305	PRINTS:PR00087	ScanProsite:PS00081	PFscan:PS51393
PANTHER:PTHR11771	PANTHER:PTHR11771:SF91	SUPFAM:SSF48484	EnsemblPlantsGene:Solyc01g099170.2	EnsemblPlants:Solyc01g099170.2.1	UniParc:UPI0002768B73
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:89482300..89485134

Molecular Weight (calculated)

57875.6 Da

IEP (calculated)

6.605

GRAVY (calculated)

-0.306

Length

511 amino acids

Sequence
(BLAST)

001: MLLVIKSNRS FVLNHHDIIM PYLRSINMSA NTKAYASRTL LFLQDNGTLK PLAIELSLPH PDGDQFGAVS KVYTPADQGV ECSIWQLAKA YAANDTGIHQ
101: LIMMEPFVIA TNRQLSVLHP IHKLLHPHFR DTMNINDLAR QILVIVVVLL RCSYFLPNIP WKCQVVVEDL TCPHGVCLLI QDYPYAVDGL EIWSAIKSWK
201: DGELQAWWNE IREGGHGDKK DEPWWPKMQT LQELIDSWIA SALHAAVNLE AGSAEYEELK TNPDKVFLKT IVPQLQTLLG ISVLEILSRH ASSDEVYLGQ
301: RDTPEWTKDQ EPLLAFERFG KKLNDIEDRI MHMNGDHKKW KNRSGHVKVP YTLIFPTSEE GLTGKGIPNS SYGGYLVNRP SLSRKFMPEP GSAEYEELKI
401: NLDKVFLKTV VPQQLTLLGM SVLELLSRHA SDTLNLGQRD SPEWTKDQEP LTAFERFGKK LSDIENQIIQ MNGDHKKWKN RSGHVNVPYT LLFPTSEDGL
501: TGKGIPNSVS T

Best Arabidopsis Sequence Match ( AT1G55020.1 )
(BLAST)

001: MFGELRDLLT GGGNETTTKK VKGTVVLMKK NVLDFNDFNA SFLDRLHEFL GNKITLRLVS SDVTDSENGS KGKLGKAAHL EDWITTITSL TAGESAFKVT
101: FDYETDFGYP GAFLIRNSHF SEFLLKSLTL EDVPGHGRVH YICNSWIYPA KHYTTDRVFF SNKTYLPHET PATLLKYREE ELVSLRGTGE GELKEWDRVY
201: DYAYYNDLGV PPKNPRPVLG GTQEYPYPRR GRTGRKPTKE DPQTESRLPI TSSLDIYVPR DERFGHLKMS DFLAYALKAI AQFIQPALEA VFDDTPKEFD
301: SFEDVLKIYE EGIDLPNQAL IDSIVKNIPL EMLKEIFRTD GQKFLKFPVP QVIKEDKTAW RTDEEFAREM LAGLNPVVIQ LLKEFPPKSK LDSESYGNQN
401: STITKSHIEH NLDGLTVEEA LEKERLFILD HHDTLMPYLG RVNTTTTKTY ASRTLLFLKD DGTLKPLVIE LSLPHPNGDK FGAVSEVYTP GEGVYDSLWQ
501: LAKAFVGVND SGNHQLISHW MQTHASIEPF VIATNRQLSV LHPVFKLLEP HFRDTMNINA LARQILINGG GIFEITVFPS KYAMEMSSFI YKNHWTFPDQ
601: ALPAELKKRG MAVEDPEAPH GLRLRIKDYP YAVDGLEVWY AIESWVRDYI FLFYKIEEDI QTDTELQAWW KEVREEGHGD KKSEPWWPKM QTREELVESC
701: TIIIWVASAL HAAVNFGQYP VAGYLPNRPT ISRQYMPKEN TPEFEELEKN PDKVFLKTIT AQLQTLLGIS LIEILSTHSS DEVYLGQRDS KEWAAEKEAL
801: EAFEKFGEKV KEIEKNIDER NDDETLKNRT GLVKMPYTLL FPSSEGGVTG RGIPNSVSI

Arabidopsis Description

LOX1Linoleate 9S-lipoxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06327]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.