Factsheet for Solyc09g075870.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35534	Soybean	cytosol	38.64	73.66
Solyc09g075860.2.1	Tomato	cytosol, nucleus	72.6	70.7
TraesCS4A01G275800.1	Wheat	cytosol	18.27	65.27
KRG91271	Soybean	cytosol	64.29	63.99
VIT_05s0020g03170.t01	Wine grape	cytosol	65.34	63.7
Solyc08g029000.2.1	Tomato	cytosol, extracellular, nucleus	64.17	63.65
Solyc01g099160.2.1	Tomato	cytosol, extracellular, nucleus	63.35	62.76
GSMUA_Achr1P22970_001	Banana	cytosol	62.06	62.65
Bra039948.1-P	Field mustard	cytosol	64.29	61.89
CDY38326	Canola	cytosol	63.93	61.56
TraesCS6D01G122000.1	Wheat	cytosol	22.25	61.29
Solyc01g099200.2.1	Tomato	cytosol, plastid	60.3	61.24
CDY46325	Canola	cytosol	63.23	61.22
AT3G22400.1	Thale cress	cytosol	63.23	60.95
Solyc08g014000.2.1	Tomato	cytosol, nucleus, plastid	61.12	60.7
Bra023829.1-P	Field mustard	cytosol	63.58	60.13
CDY64191	Canola	cytosol	63.47	59.76
Solyc01g099180.2.1	Tomato	cytosol	58.78	58.78
GSMUA_AchrUn_...	Banana	cytosol	53.4	58.16
Solyc01g099210.2.1	Tomato	cytosol	58.31	57.71
TraesCS4A01G359800.1	Wheat	cytosol	35.83	57.63
Solyc01g099190.2.1	Tomato	cytosol, extracellular, nucleus, plastid	57.85	57.58
GSMUA_AchrUn_...	Banana	cytosol	57.26	57.19
GSMUA_Achr1P24370_001	Banana	cytosol	56.21	56.67
Os03t0700700-01	Rice	cytosol, plasma membrane, plastid	58.2	56.67
EER93612	Sorghum	cytosol	56.21	55.43
TraesCS4B01G037800.1	Wheat	cytosol	56.91	55.35
TraesCS4D01G035200.1	Wheat	cytosol	53.63	55.25
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	56.79	55.24
TraesCS4A01G275900.1	Wheat	cytosol, unclear	56.79	55.24
TraesCS4B01G037900.1	Wheat	cytosol, golgi, nucleus, plastid, unclear	55.62	55.17
TraesCS4B01G037700.3	Wheat	cytosol, golgi	55.5	55.05
Zm00001d033623_P003	Maize	cytosol	55.85	55.02
TraesCS4D01G035100.1	Wheat	cytosol	56.44	54.9
EER93611	Sorghum	cytosol	57.03	54.84
GSMUA_Achr6P25110_001	Banana	cytosol	50.94	54.79
TraesCS5A01G378800.2	Wheat	cytosol	49.77	54.63
Zm00001d013493_P001	Maize	cytosol, extracellular, mitochondrion	56.56	54.45
Zm00001d033624_P001	Maize	cytosol	56.44	54.34
GSMUA_Achr6P25090_001	Banana	cytosol	53.16	54.18
GSMUA_Achr9P19250_001	Banana	plasma membrane	59.84	53.73
Os03t0699700-01	Rice	cytosol, plastid	54.22	53.65
KRG88464	Soybean	cytosol	28.57	53.51
KXG37783	Sorghum	cytosol	55.62	53.19
TraesCS5B01G382400.1	Wheat	cytosol, golgi	53.28	53.15
TraesCS3B01G602500.1	Wheat	cytosol	54.57	52.89
EES04025	Sorghum	cytosol	53.75	52.88
HORVU5Hr1G093770.1	Barley	cytosol	53.4	52.84
TraesCS5B01G382300.1	Wheat	cytosol, unclear	53.16	52.55
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	53.04	52.43
Os03t0700400-00	Rice	cytosol, plasma membrane	7.73	52.38
TraesCS5A01G378700.1	Wheat	cytosol	52.93	52.31
Os03t0738600-01	Rice	plasma membrane, plastid	53.28	52.3
TraesCS5D01G388700.1	Wheat	cytosol, golgi, unclear	52.81	52.2
TraesCS5A01G378900.1	Wheat	cytosol	52.69	52.08
Zm00001d042541_P002	Maize	cytosol	53.86	52.04
TraesCS3B01G605700.1	Wheat	cytosol	53.75	51.86
TraesCS5B01G382600.1	Wheat	cytosol	52.22	51.8
TraesCS6A01G132500.1	Wheat	mitochondrion	52.81	51.66
TraesCS6A01G132200.1	Wheat	mitochondrion	52.81	51.66
EES04028	Sorghum	cytosol	52.69	51.55
TraesCS6B01G160400.1	Wheat	mitochondrion	52.69	51.55
TraesCS5D01G513100.1	Wheat	cytosol	51.99	51.15
HORVU5Hr1G117110.1	Barley	cytosol	52.22	50.28
Zm00001d042540_P008	Maize	cytosol	52.46	50.22
TraesCS5A01G379000.1	Wheat	nucleus, unclear	45.2	50.13
TraesCS5D01G388800.1	Wheat	cytosol	52.58	50.06
Os11t0575600-01	Rice	mitochondrion	50.7	49.88
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	28.45	49.8
Solyc01g009680.2.1	Tomato	plastid	25.64	49.44
GSMUA_Achr6P25080_001	Banana	cytosol	44.03	48.52
Solyc09g055900.2.1	Tomato	cytosol	25.53	47.19
TraesCS6B01G395700.1	Wheat	cytosol	44.26	46.55
Solyc01g099170.2.1	Tomato	cytosol, mitochondrion	27.4	45.79
Solyc01g099150.2.1	Tomato	nucleus	44.5	44.08
TraesCS6D01G121900.1	Wheat	mitochondrion	22.01	42.06
Solyc03g122340.2.1	Tomato	cytosol	42.39	39.87
Solyc01g006560.2.1	Tomato	plastid	42.04	39.8
Solyc01g006540.2.1	Tomato	plastid	41.22	39.29
Solyc12g011040.1.1	Tomato	nucleus, plastid	40.16	38.45
Solyc05g014790.2.1	Tomato	plastid	40.16	37.65
Solyc09g055890.2.1	Tomato	cytosol	13.58	31.27
GSMUA_Achr6P25100_001	Banana	cytosol	42.86	3.05

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629
GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491
GO:GO:0016702	GO:GO:0031408	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	InterPro:IPR001024
InterPro:IPR013819	InterPro:IPR027433	UniProt:K4CVG4	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS
InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477
InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	ScanProsite:PS00711
PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF53	SMART:SM00308	SUPFAM:SSF48484
SUPFAM:SSF49723	EnsemblPlantsGene:Solyc09g075870.1	EnsemblPlants:Solyc09g075870.1.1	UniParc:UPI000276BD65	SEG:seg	:

Description

Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:K4CVG4]

Coordinates

chr9:+:67515791..67520233

Molecular Weight (calculated)

97925.4 Da

IEP (calculated)

6.177

GRAVY (calculated)

-0.421

Length

854 amino acids

Sequence
(BLAST)

001: MGCAEILEKL LETVCGKQRD VPVERDAVKI KGTVVLMKKN VLNFKDAGSA FLDRMHELFG KRVTIQLVSA EHADPENGSK GKLGKPATLE WASSKTWISV
101: EEAAFNITFD WDESLGVPGA FIVKNNHHSQ FYLKTLTLHD VPGDGEVHFV CNSWVYPSHR YNNDRVFFSN KTYLPCNTPE PLVAYRNEEL VNLRGTGSGM
201: LKEWDRVYDY AVYNDLGYDR PVLGRSKEYP YPRRVRTSRP PTKRDSSLEK RLPRLSLNIY VPRDELFNHV KFNDFLTYSA TSIIRVVIPE TASVLARPFN
301: EFKSFERVLE FYKDSDEERS RECLPWKILK GQFHKYPIPH VIEEDNSAWR SDEEFGREML AGVNPVIIQR LQEFPPTSKL NPEVYGNHTS KITREQIEKY
401: MDGLTVDDAI KNDRLFILNY HDLLMPYITR INSTTTKIYA SRTILLLQDD GTLKPLAIEL SLPHPQGEKH GFTSQVFSPS NDESVEGYVW HLAKAYVAVN
501: DSGYHQLISH WLNTHAVIEP FIIAANRQLS VVHPIYKLLQ PHFRDTLYVN GLARQILINA GGILESTVFP SKYAMEMSSV IYKNWVFTEQ ALPADLLKRG
601: IAVPDSSQPN GLRLLIKDYP FAVDGLEIWS AIEAWVDEYC SFYYSTDDMI RDDTELQSWW MEVRNEGHGD LKDEPWWPQM QTRAELIETC TIIIWVASAL
701: HAAVNFGQYP YAGYLPNRPT VSRRFMPEPG TPEYAELESN HERAYLKTIT AQLQTLMGIS LIEMLSMHSE DEIYLGQRDN PEWTCDRQPR QALQKFSDKL
801: VEIENRIIDR NNDNILKNRN GPVKLPYTLL YPNATGDKSA TGLTGKGIPN SVSI

Best Arabidopsis Sequence Match ( AT3G22400.1 )
(BLAST)

001: MIHTDIAEIL CVKPKTTKKT KTMEEDVKKT TTMKIEGEVV VMKKNLLDFK DVMASLLDRV NELLGRRVSL HLISSHQPDP ANEKRGRLGK AAHLEKWVTK
101: IKTSVTAEET AFGVTFDWDE SMGPPAAFVI KNHHHSQFYL KSLTLRGFPD GEGGATAIHF ICNSWIYPNH RYRSDRVFFS NKAYLPSETP ELIKELREEE
201: LKNLRGNEKG GEFKEWDRVY DYAYYNDLGA PDKGPDSVRP VLGGSPELPY PRRGKTGRKS TKSDPKSESR LALLNLNIYV PRDERFSHVK FSDFLAYALK
301: SVTQVLVPEI ASVCDKTINE FDSFEDVFHL YDGSIKLANG HTISKLRDVI PWEMFRELVR NDGERFLKYP LPDILKESRS AWRTDEEFAR EMLAGLNPVV
401: ISRLQEFPPK SCLDSAKYGN QHSSIRTEHI ESNMNGLNVQ EALEQNKLYI LDHHDALMPY LTRINSTNTK TYATRTLLLL QADGTLKPLA IELSLPHAQG
501: ESYGSVSKVF TPAEKGVEGS VWQLAKAYAA VNDSGYHQLI SHWLQTHAVI EPFIIASNRQ LSVVHPIHKL LHPHFRDTMN INALARHVLI NSDGVLERTV
601: FPSRYAMEMS SSIYKNWVFT EQALPKDLLK RGVAVEDPNS DNGVKLLIED YPFAVDGLEI WSAIKTWVTE YCTFYYNNDK TVQTDTEIQS WWTELRTKGH
701: GDKRHESWWP SMQTRDDLIE TCTIIIWIAS ALHAAVNFGQ YPYAGFLPNR PTVSRRFMPE PGTDEYAELE EDADVAFLKT ITPQLQTLLG ISIIEILSMH
801: STDEIYLGQR DSPNWTADDE PLEAFKRFGK ELELIENNII RRNNDKRFKN RTGPVNIPYT LLYPNTTDYT REGGITGKGI PNSVSI

Arabidopsis Description

LOX5Linoleate 9S-lipoxygenase 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.